RNA–Protein interactions for RNA: ENST00000489196.1

CASD1-206, Transcript of CAS1 domain containing 1, humanhuman

TSL 3

Gene CASD1, Length 2,199 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASD1-206ENST00000489196 SALL2Q9Y467 1007 aaPredicted RBP6.64□□□□□ -1.35
CASD1-206ENST00000489196 FOXC1Q12948 553 aa6.63□□□□□ -1.35
CASD1-206ENST00000489196 PHOX2BQ99453 314 aa6.63□□□□□ -1.35
CASD1-206ENST00000489196 TOR4AQ9NXH8 423 aa6.63□□□□□ -1.35
CASD1-206ENST00000489196 FCF1Q9Y324 198 aaKnown RBP6.63□□□□□ -1.35
CASD1-206ENST00000489196 TERTO14746 1132 aaKnown RBP6.62□□□□□ -1.35
CASD1-206ENST00000489196 HAP1P54257 671 aaPredicted RBP6.62□□□□□ -1.35
CASD1-206ENST00000489196 FAM160A2Q8N612 972 aaPredicted RBP6.62□□□□□ -1.35
CASD1-206ENST00000489196 BRICD5Q6PL45 260 aa6.61□□□□□ -1.35
CASD1-206ENST00000489196 KIFC2Q96AC6 838 aa6.61□□□□□ -1.35
CASD1-206ENST00000489196 TULP1O00294 542 aaPredicted RBP6.61□□□□□ -1.35
CASD1-206ENST00000489196 ZBTB24O43167 697 aaPredicted RBP6.59□□□□□ -1.35
CASD1-206ENST00000489196 Q3C1V9 767 aa6.59□□□□□ -1.35
CASD1-206ENST00000489196 MSS51Q4VC12 460 aa6.59□□□□□ -1.35
CASD1-206ENST00000489196 SLC16A10Q8TF71 515 aa6.59□□□□□ -1.35
CASD1-206ENST00000489196 DACH1Q9UI36 760 aa6.59□□□□□ -1.35
CASD1-206ENST00000489196 MAP2K5Q13163 448 aa6.58□□□□□ -1.36
CASD1-206ENST00000489196 PRDM9Q9NQV7 894 aa6.58□□□□□ -1.36
CASD1-206ENST00000489196 RNF19BQ6ZMZ0 732 aa6.57□□□□□ -1.36
CASD1-206ENST00000489196 KDM2AQ9Y2K7 1162 aa6.57□□□□□ -1.36
CASD1-206ENST00000489196 CD46P15529 392 aa6.57□□□□□ -1.36
CASD1-206ENST00000489196 TRIM47Q96LD4 638 aa6.57□□□□□ -1.36
CASD1-206ENST00000489196 KDM4AO75164 1064 aa6.56□□□□□ -1.36
CASD1-206ENST00000489196 TTC24A2A3L6 582 aaPredicted RBP6.55□□□□□ -1.36
CASD1-206ENST00000489196 IRF6O14896 467 aa6.55□□□□□ -1.36
CASD1-206ENST00000489196 ATP13A2Q9NQ11 1180 aa6.55□□□□□ -1.36
CASD1-206ENST00000489196 USP46P62068 366 aa6.55□□□□□ -1.36
CASD1-206ENST00000489196 NPAS3Q8IXF0 933 aa6.55□□□□□ -1.36
CASD1-206ENST00000489196 MINK1Q8N4C8 1332 aaPredicted RBP6.54□□□□□ -1.36
CASD1-206ENST00000489196 MMP16P51512 607 aa6.54□□□□□ -1.36
CASD1-206ENST00000489196 USB1Q9BQ65 265 aaKnown RBP6.54□□□□□ -1.36
CASD1-206ENST00000489196 ZSCAN1Q8NBB4 408 aa6.54□□□□□ -1.36
CASD1-206ENST00000489196 WNT7AO00755 349 aa6.53□□□□□ -1.36
CASD1-206ENST00000489196 MDM2Q00987 491 aaPredicted RBP6.53□□□□□ -1.36
CASD1-206ENST00000489196 SNIP1Q8TAD8 396 aaKnown RBP6.53□□□□□ -1.36
CASD1-206ENST00000489196 TRIM32Q13049 653 aa6.52□□□□□ -1.36
CASD1-206ENST00000489196 DXOO77932 396 aaKnown RBP6.51□□□□□ -1.37
CASD1-206ENST00000489196 VSIG10Q8N0Z9 540 aa6.51□□□□□ -1.37
CASD1-206ENST00000489196 SNRPBP14678 240 aaKnown RBP6.51□□□□□ -1.37
CASD1-206ENST00000489196 CLCN1P35523 988 aa6.5□□□□□ -1.37
CASD1-206ENST00000489196 IRF7Q92985 503 aa6.5□□□□□ -1.37
CASD1-206ENST00000489196 HOXA2O43364 376 aa6.5□□□□□ -1.37
CASD1-206ENST00000489196 SUZ12Q15022 739 aaKnown RBP6.5□□□□□ -1.37
CASD1-206ENST00000489196 CCDC24Q8N4L8 307 aa6.5□□□□□ -1.37
CASD1-206ENST00000489196 KRI1Q8N9T8 703 aaKnown RBP6.5□□□□□ -1.37
CASD1-206ENST00000489196 CCDC102AQ96A19 550 aa6.5□□□□□ -1.37
CASD1-206ENST00000489196 REPIN1Q9BWE0 567 aaKnown RBP6.5□□□□□ -1.37
CASD1-206ENST00000489196 GPCPD1Q9NPB8 672 aa6.5□□□□□ -1.37
CASD1-206ENST00000489196 LCE2CQ5TA81 110 aa6.49□□□□□ -1.37
CASD1-206ENST00000489196 SMPD1P17405 629 aa6.48□□□□□ -1.37
CASD1-206ENST00000489196 MRGPRX2Q96LB1 330 aa6.48□□□□□ -1.37
CASD1-206ENST00000489196 NXF1Q9UBU9 619 aaKnown RBP6.48□□□□□ -1.37
CASD1-206ENST00000489196 NUTM1Q86Y26 1132 aa6.48□□□□□ -1.37
CASD1-206ENST00000489196 HLA-CQ95604 372 aa6.48□□□□□ -1.37
CASD1-206ENST00000489196 FAM217BQ9NTX9 383 aaPredicted RBP6.47□□□□□ -1.37
CASD1-206ENST00000489196 WNT7BP56706 349 aa6.46□□□□□ -1.38
CASD1-206ENST00000489196 RC3H1Q5TC82 1133 aaKnown RBP6.46□□□□□ -1.38
CASD1-206ENST00000489196 J3QL48 77 aa6.45□□□□□ -1.38
CASD1-206ENST00000489196 JUNDP17535 347 aa6.45□□□□□ -1.38
CASD1-206ENST00000489196 GUCA2AQ02747 115 aa6.45□□□□□ -1.38
CASD1-206ENST00000489196 RETREG3Q86VR2 466 aa6.45□□□□□ -1.38
CASD1-206ENST00000489196 GMPRP36959 345 aa6.44□□□□□ -1.38
CASD1-206ENST00000489196 SYMPKQ92797 1274 aaKnown RBP6.44□□□□□ -1.38
CASD1-206ENST00000489196 SKOR1P84550 965 aa6.43□□□□□ -1.38
CASD1-206ENST00000489196 FDX1P10109 184 aa6.42□□□□□ -1.38
CASD1-206ENST00000489196 LORP23490 312 aaPredicted RBP6.42□□□□□ -1.38
CASD1-206ENST00000489196 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.42□□□□□ -1.38
CASD1-206ENST00000489196 NUDT12Q9BQG2 462 aa6.42□□□□□ -1.38
CASD1-206ENST00000489196 HPS1Q92902 700 aa6.42□□□□□ -1.38
CASD1-206ENST00000489196 C6orf229H3BNL8 230 aa6.41□□□□□ -1.38
CASD1-206ENST00000489196 H3BM21 787 aa6.41□□□□□ -1.38
CASD1-206ENST00000489196 ALDH1A1P00352 501 aa6.41□□□□□ -1.38
CASD1-206ENST00000489196 SSTR3P32745 418 aaPredicted RBP6.41□□□□□ -1.38
CASD1-206ENST00000489196 KCNMA1Q12791 1236 aa6.41□□□□□ -1.38
CASD1-206ENST00000489196 MS4A1P11836 297 aa6.4□□□□□ -1.38
CASD1-206ENST00000489196 EHBP1Q8NDI1 1231 aa6.4□□□□□ -1.39
CASD1-206ENST00000489196 PCDHGC3Q9UN70 934 aa6.4□□□□□ -1.39
CASD1-206ENST00000489196 CCNYL3P0C7X3 344 aa6.39□□□□□ -1.39
CASD1-206ENST00000489196 PTCRAQ6ISU1 281 aaPredicted RBP6.39□□□□□ -1.39
CASD1-206ENST00000489196 TTLL12Q14166 644 aaPredicted RBP6.38□□□□□ -1.39
CASD1-206ENST00000489196 SPIRE2Q8WWL2 714 aa6.38□□□□□ -1.39
CASD1-206ENST00000489196 NISCHQ9Y2I1 1504 aa6.38□□□□□ -1.39
CASD1-206ENST00000489196 SIAH2O43255 324 aa6.38□□□□□ -1.39
CASD1-206ENST00000489196 PTPRNQ16849 979 aa6.37□□□□□ -1.39
CASD1-206ENST00000489196 BARGINQ6ZT62 677 aa6.37□□□□□ -1.39
CASD1-206ENST00000489196 WASF2Q9Y6W5 498 aa6.37□□□□□ -1.39
CASD1-206ENST00000489196 SPDYE5A6NIY4 337 aa6.37□□□□□ -1.39
CASD1-206ENST00000489196 EVA1BQ9NVM1 165 aa6.37□□□□□ -1.39
CASD1-206ENST00000489196 MOXD2PA6NHM9 499 aa6.35□□□□□ -1.39
CASD1-206ENST00000489196 NDUFV2P19404 249 aa6.35□□□□□ -1.39
CASD1-206ENST00000489196 SH3BP2P78314 561 aa6.35□□□□□ -1.39
CASD1-206ENST00000489196 AMHR2Q16671 573 aa6.35□□□□□ -1.39
CASD1-206ENST00000489196 ZMYND10O75800 440 aa6.35□□□□□ -1.39
CASD1-206ENST00000489196 MTMR2Q13614 643 aa6.35□□□□□ -1.39
CASD1-206ENST00000489196 PRR7Q8TB68 274 aa6.35□□□□□ -1.39
CASD1-206ENST00000489196 UNC93B1Q9H1C4 597 aa6.35□□□□□ -1.39
CASD1-206ENST00000489196 RNF225M0QZC1 329 aaPredicted RBP6.34□□□□□ -1.39
CASD1-206ENST00000489196 CAPN5O15484 640 aaPredicted RBP6.34□□□□□ -1.39
CASD1-206ENST00000489196 KCNH2Q12809 1159 aa6.34□□□□□ -1.39
CASD1-206ENST00000489196 DIXDC1Q155Q3 683 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms