RNA–Protein interactions for RNA: ENST00000489158.1

EXOSC1-211, Transcript of exosome component 1, humanhuman

TSL 2

Gene EXOSC1, Length 2,113 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1-211ENST00000489158 ABCC11Q96J66 1382 aa12.16□□□□□ -0.46
EXOSC1-211ENST00000489158 LTKP29376 864 aa12.16□□□□□ -0.46
EXOSC1-211ENST00000489158 B4GALNT3Q6L9W6 998 aa12.16□□□□□ -0.46
EXOSC1-211ENST00000489158 DISP3Q9P2K9 1392 aa12.15□□□□□ -0.46
EXOSC1-211ENST00000489158 FAM9BQ8IZU0 186 aa12.14□□□□□ -0.47
EXOSC1-211ENST00000489158 STK26Q9P289 416 aa12.14□□□□□ -0.47
EXOSC1-211ENST00000489158 SIRT1Q96EB6 747 aa12.14□□□□□ -0.47
EXOSC1-211ENST00000489158 PIK3R4Q99570 1358 aa12.13□□□□□ -0.47
EXOSC1-211ENST00000489158 FAM135BQ49AJ0 1406 aa12.13□□□□□ -0.47
EXOSC1-211ENST00000489158 ANKLE2Q86XL3 938 aa12.13□□□□□ -0.47
EXOSC1-211ENST00000489158 TBX22Q9Y458 520 aa12.13□□□□□ -0.47
EXOSC1-211ENST00000489158 PUS7Q96PZ0 661 aaKnown RBP12.13□□□□□ -0.47
EXOSC1-211ENST00000489158 METP08581 1390 aa12.12□□□□□ -0.47
EXOSC1-211ENST00000489158 DEKP35659 375 aaKnown RBP12.11□□□□□ -0.47
EXOSC1-211ENST00000489158 MYOM1P52179 1685 aa12.11□□□□□ -0.47
EXOSC1-211ENST00000489158 PRKRIP1Q9H875 184 aaPredicted RBP12.11□□□□□ -0.47
EXOSC1-211ENST00000489158 XRN1Q8IZH2 1706 aaKnown RBP12.1□□□□□ -0.47
EXOSC1-211ENST00000489158 SAFB2Q14151 953 aaKnown RBP eCLIP12.1□□□□□ -0.47
EXOSC1-211ENST00000489158 MRS2Q9HD23 443 aa12.1□□□□□ -0.47
EXOSC1-211ENST00000489158 ZBED9Q6R2W3 1325 aa12.1□□□□□ -0.47
EXOSC1-211ENST00000489158 TULP4Q9NRJ4 1543 aa12.09□□□□□ -0.47
EXOSC1-211ENST00000489158 EVC2Q86UK5 1308 aa12.09□□□□□ -0.47
EXOSC1-211ENST00000489158 PTCH1Q13635 1447 aa12.09□□□□□ -0.47
EXOSC1-211ENST00000489158 NPHP4O75161 1426 aaPredicted RBP12.08□□□□□ -0.47
EXOSC1-211ENST00000489158 POGKQ9P215 609 aa12.08□□□□□ -0.47
EXOSC1-211ENST00000489158 ADGRB2O60241 1585 aa12.08□□□□□ -0.48
EXOSC1-211ENST00000489158 CNGB1Q14028 1251 aaPredicted RBP12.08□□□□□ -0.48
EXOSC1-211ENST00000489158 PRAM1Q96QH2 718 aa12.08□□□□□ -0.48
EXOSC1-211ENST00000489158 CHD2O14647 1828 aaKnown RBP12.07□□□□□ -0.48
EXOSC1-211ENST00000489158 NOP58Q9Y2X3 529 aaKnown RBP12.07□□□□□ -0.48
EXOSC1-211ENST00000489158 NINLQ9Y2I6 1382 aa12.07□□□□□ -0.48
EXOSC1-211ENST00000489158 SLC26A8Q96RN1 970 aa12.07□□□□□ -0.48
EXOSC1-211ENST00000489158 PTPRUQ92729 1446 aa12.06□□□□□ -0.48
EXOSC1-211ENST00000489158 KTN1Q86UP2 1357 aaKnown RBP12.06□□□□□ -0.48
EXOSC1-211ENST00000489158 ATAD2Q6PL18 1390 aa12.05□□□□□ -0.48
EXOSC1-211ENST00000489158 PAK3O75914 559 aaPredicted RBP12.05□□□□□ -0.48
EXOSC1-211ENST00000489158 NWD1Q149M9 1564 aa12.05□□□□□ -0.48
EXOSC1-211ENST00000489158 NBR1Q14596 966 aa12.04□□□□□ -0.48
EXOSC1-211ENST00000489158 MINK1Q8N4C8 1332 aaPredicted RBP12.04□□□□□ -0.48
EXOSC1-211ENST00000489158 LMTK3Q96Q04 1460 aa12.04□□□□□ -0.48
EXOSC1-211ENST00000489158 ROBO2Q9HCK4 1378 aa12.03□□□□□ -0.48
EXOSC1-211ENST00000489158 PANK3Q9H999 370 aa12.03□□□□□ -0.48
EXOSC1-211ENST00000489158 PLEKHH1Q9ULM0 1364 aa12.03□□□□□ -0.48
EXOSC1-211ENST00000489158 WAPLQ7Z5K2 1190 aa12.02□□□□□ -0.48
EXOSC1-211ENST00000489158 AMOTL2Q9Y2J4 779 aa12.02□□□□□ -0.48
EXOSC1-211ENST00000489158 USP32Q8NFA0 1604 aa12.02□□□□□ -0.49
EXOSC1-211ENST00000489158 SRPK2P78362 688 aaKnown RBP12.02□□□□□ -0.49
EXOSC1-211ENST00000489158 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.01□□□□□ -0.49
EXOSC1-211ENST00000489158 TMC1Q8TDI8 760 aa12.01□□□□□ -0.49
EXOSC1-211ENST00000489158 NPC1L1Q9UHC9 1359 aa12.01□□□□□ -0.49
EXOSC1-211ENST00000489158 PER1O15534 1290 aaPredicted RBP12.01□□□□□ -0.49
EXOSC1-211ENST00000489158 CABP2Q9NPB3 220 aa12□□□□□ -0.49
EXOSC1-211ENST00000489158 SMG6Q86US8 1419 aaKnown RBP11.99□□□□□ -0.49
EXOSC1-211ENST00000489158 NCKAP5LQ9HCH0 1330 aa11.99□□□□□ -0.49
EXOSC1-211ENST00000489158 NKTRP30414 1462 aaKnown RBP11.99□□□□□ -0.49
EXOSC1-211ENST00000489158 ANKRD36BQ8N2N9 1353 aa11.99□□□□□ -0.49
EXOSC1-211ENST00000489158 WASLO00401 505 aaPredicted RBP11.99□□□□□ -0.49
EXOSC1-211ENST00000489158 RALBP1Q15311 655 aa11.99□□□□□ -0.49
EXOSC1-211ENST00000489158 CDK19Q9BWU1 502 aa11.99□□□□□ -0.49
EXOSC1-211ENST00000489158 KNSTRNQ9Y448 316 aa11.99□□□□□ -0.49
EXOSC1-211ENST00000489158 ITSN1Q15811 1721 aa11.98□□□□□ -0.49
EXOSC1-211ENST00000489158 ATP7BP35670 1465 aa11.98□□□□□ -0.49
EXOSC1-211ENST00000489158 TOPAZ1Q8N9V7 1692 aa11.98□□□□□ -0.49
EXOSC1-211ENST00000489158 STRCQ7RTU9 1775 aa11.98□□□□□ -0.49
EXOSC1-211ENST00000489158 CCDC136Q96JN2 1154 aa11.98□□□□□ -0.49
EXOSC1-211ENST00000489158 NUDCQ9Y266 331 aa11.98□□□□□ -0.49
EXOSC1-211ENST00000489158 CDC42BPGQ6DT37 1551 aa11.97□□□□□ -0.49
EXOSC1-211ENST00000489158 KCNA6P17658 529 aa11.97□□□□□ -0.49
EXOSC1-211ENST00000489158 CC2D1BQ5T0F9 858 aaKnown RBP11.97□□□□□ -0.49
EXOSC1-211ENST00000489158 PARD3Q8TEW0 1356 aa11.97□□□□□ -0.49
EXOSC1-211ENST00000489158 IPO9Q96P70 1041 aaKnown RBP11.96□□□□□ -0.49
EXOSC1-211ENST00000489158 SLC12A5Q9H2X9 1139 aa11.96□□□□□ -0.49
EXOSC1-211ENST00000489158 NALCNQ8IZF0 1738 aa11.96□□□□□ -0.49
EXOSC1-211ENST00000489158 ANP32AP39687 249 aaKnown RBP11.96□□□□□ -0.5
EXOSC1-211ENST00000489158 FMN2Q9NZ56 1722 aa11.96□□□□□ -0.5
EXOSC1-211ENST00000489158 TERF2IPQ9NYB0 399 aa11.95□□□□□ -0.5
EXOSC1-211ENST00000489158 RNF123Q5XPI4 1314 aa11.95□□□□□ -0.5
EXOSC1-211ENST00000489158 NSD2O96028 1365 aa11.95□□□□□ -0.5
EXOSC1-211ENST00000489158 ANKARQ7Z5J8 1434 aa11.94□□□□□ -0.5
EXOSC1-211ENST00000489158 AKAP12Q02952 1782 aa11.94□□□□□ -0.5
EXOSC1-211ENST00000489158 ADGRL3Q9HAR2 1447 aa11.94□□□□□ -0.5
EXOSC1-211ENST00000489158 SENP3-EIF4A1A0A087X0R7 540 aa11.93□□□□□ -0.5
EXOSC1-211ENST00000489158 HSPA2P54652 639 aa11.93□□□□□ -0.5
EXOSC1-211ENST00000489158 AMER1Q5JTC6 1135 aaPredicted RBP11.93□□□□□ -0.5
EXOSC1-211ENST00000489158 MON2Q7Z3U7 1717 aa11.93□□□□□ -0.5
EXOSC1-211ENST00000489158 MYBBP1AQ9BQG0 1328 aaKnown RBP11.93□□□□□ -0.5
EXOSC1-211ENST00000489158 NSD3Q9BZ95 1437 aa11.93□□□□□ -0.5
EXOSC1-211ENST00000489158 CD163L1Q9NR16 1453 aa11.93□□□□□ -0.5
EXOSC1-211ENST00000489158 ZBTB47Q9UFB7 747 aaPredicted RBP11.93□□□□□ -0.5
EXOSC1-211ENST00000489158 NCOA3Q9Y6Q9 1424 aa11.93□□□□□ -0.5
EXOSC1-211ENST00000489158 ANKRD26Q9UPS8 1709 aa11.93□□□□□ -0.5
EXOSC1-211ENST00000489158 PPIP5K1Q6PFW1 1433 aa11.93□□□□□ -0.5
EXOSC1-211ENST00000489158 A0A1W2PP64 1363 aa11.93□□□□□ -0.5
EXOSC1-211ENST00000489158 HDGFL2Q7Z4V5 671 aaPredicted RBP11.93□□□□□ -0.5
EXOSC1-211ENST00000489158 CCDC61Q9Y6R9 512 aa11.93□□□□□ -0.5
EXOSC1-211ENST00000489158 NUDT16Q96DE0 195 aaKnown RBP11.92□□□□□ -0.5
EXOSC1-211ENST00000489158 KIF20BQ96Q89 1820 aa11.92□□□□□ -0.5
EXOSC1-211ENST00000489158 RTL5Q5HYW3 569 aaPredicted RBP11.92□□□□□ -0.5
EXOSC1-211ENST00000489158 CPSF1Q10570 1443 aaKnown RBP11.91□□□□□ -0.5
EXOSC1-211ENST00000489158 BRD4O60885 1362 aaPredicted RBP11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms