RNA–Protein interactions for RNA: ENST00000489071.5

ERGIC3-218, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 582 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-218ENST00000489071 NALCNQ8IZF0 1738 aa12.53□□□□□ -0.4
ERGIC3-218ENST00000489071 PPLO60437 1756 aa12.53□□□□□ -0.4
ERGIC3-218ENST00000489071 PTCH1Q13635 1447 aa12.53□□□□□ -0.4
ERGIC3-218ENST00000489071 SETD1AO15047 1707 aaKnown RBP12.52□□□□□ -0.41
ERGIC3-218ENST00000489071 NUTM2BA6NNL0 878 aaPredicted RBP12.52□□□□□ -0.41
ERGIC3-218ENST00000489071 NUTM2EB1AL46 878 aaPredicted RBP12.52□□□□□ -0.41
ERGIC3-218ENST00000489071 NUTM2AQ8IVF1 878 aaPredicted RBP12.52□□□□□ -0.41
ERGIC3-218ENST00000489071 DHX57Q6P158 1386 aaKnown RBP12.51□□□□□ -0.41
ERGIC3-218ENST00000489071 PRAG1Q86YV5 1406 aa12.51□□□□□ -0.41
ERGIC3-218ENST00000489071 C1orf167Q5SNV9 1468 aa12.5□□□□□ -0.41
ERGIC3-218ENST00000489071 CCDC144AA2RUR9 1427 aa12.49□□□□□ -0.41
ERGIC3-218ENST00000489071 ROBO2Q9HCK4 1378 aa12.49□□□□□ -0.41
ERGIC3-218ENST00000489071 RXRBP28702 533 aa12.49□□□□□ -0.41
ERGIC3-218ENST00000489071 PNPLA6Q8IY17 1366 aa12.47□□□□□ -0.41
ERGIC3-218ENST00000489071 ANKRD30BQ9BXX2 1392 aa12.47□□□□□ -0.41
ERGIC3-218ENST00000489071 DDX17Q92841 729 aaKnown RBP12.47□□□□□ -0.41
ERGIC3-218ENST00000489071 MPHOSPH9Q99550 1183 aa12.47□□□□□ -0.41
ERGIC3-218ENST00000489071 LAMC1P11047 1609 aa12.47□□□□□ -0.41
ERGIC3-218ENST00000489071 AFF2P51816 1311 aa12.46□□□□□ -0.41
ERGIC3-218ENST00000489071 RGL3Q3MIN7 710 aa12.46□□□□□ -0.41
ERGIC3-218ENST00000489071 SOS2Q07890 1332 aaPredicted RBP12.45□□□□□ -0.42
ERGIC3-218ENST00000489071 C8orf37Q96NL8 207 aa12.45□□□□□ -0.42
ERGIC3-218ENST00000489071 ORAI2Q96SN7 254 aa12.45□□□□□ -0.42
ERGIC3-218ENST00000489071 CDK12Q9NYV4 1490 aaPredicted RBP12.45□□□□□ -0.42
ERGIC3-218ENST00000489071 ADGRF5Q8IZF2 1346 aa12.44□□□□□ -0.42
ERGIC3-218ENST00000489071 SPATA31E1Q6ZUB1 1445 aa12.44□□□□□ -0.42
ERGIC3-218ENST00000489071 IFT172Q9UG01 1749 aa12.43□□□□□ -0.42
ERGIC3-218ENST00000489071 NGLY1Q96IV0 654 aa12.43□□□□□ -0.42
ERGIC3-218ENST00000489071 QTRT2Q9H974 415 aaKnown RBP12.43□□□□□ -0.42
ERGIC3-218ENST00000489071 TIMELESSQ9UNS1 1208 aa12.43□□□□□ -0.42
ERGIC3-218ENST00000489071 ATF5Q9Y2D1 282 aaPredicted RBP12.43□□□□□ -0.42
ERGIC3-218ENST00000489071 CDC42BPGQ6DT37 1551 aa12.43□□□□□ -0.42
ERGIC3-218ENST00000489071 NPHP3Q7Z494 1330 aa12.42□□□□□ -0.42
ERGIC3-218ENST00000489071 RBM6P78332 1123 aaKnown RBP12.42□□□□□ -0.42
ERGIC3-218ENST00000489071 ESCO1Q5FWF5 840 aa12.42□□□□□ -0.42
ERGIC3-218ENST00000489071 UPF1Q92900 1129 aaKnown RBP eCLIP12.42□□□□□ -0.42
ERGIC3-218ENST00000489071 STK26Q9P289 416 aa12.42□□□□□ -0.42
ERGIC3-218ENST00000489071 TECPR2O15040 1411 aa12.42□□□□□ -0.42
ERGIC3-218ENST00000489071 LRPPRCP42704 1394 aaKnown RBP12.42□□□□□ -0.42
ERGIC3-218ENST00000489071 ABCC11Q96J66 1382 aa12.42□□□□□ -0.42
ERGIC3-218ENST00000489071 ADAMTS2O95450 1211 aa12.41□□□□□ -0.42
ERGIC3-218ENST00000489071 KNDC1Q76NI1 1749 aa12.4□□□□□ -0.42
ERGIC3-218ENST00000489071 WAPLQ7Z5K2 1190 aa12.4□□□□□ -0.42
ERGIC3-218ENST00000489071 PIK3C2GO75747 1445 aa12.39□□□□□ -0.43
ERGIC3-218ENST00000489071 TMEM132EQ6IEE7 984 aa12.39□□□□□ -0.43
ERGIC3-218ENST00000489071 SIRT1Q96EB6 747 aa12.39□□□□□ -0.43
ERGIC3-218ENST00000489071 COL22A1Q8NFW1 1626 aaPredicted RBP12.38□□□□□ -0.43
ERGIC3-218ENST00000489071 USP21Q9UK80 565 aa12.38□□□□□ -0.43
ERGIC3-218ENST00000489071 TRPC5Q9UL62 973 aaPredicted RBP12.38□□□□□ -0.43
ERGIC3-218ENST00000489071 YTHDC2Q9H6S0 1430 aaKnown RBP12.37□□□□□ -0.43
ERGIC3-218ENST00000489071 FOXO3O43524 673 aa12.37□□□□□ -0.43
ERGIC3-218ENST00000489071 FNBP4Q8N3X1 1017 aaPredicted RBP12.37□□□□□ -0.43
ERGIC3-218ENST00000489071 C14orf93Q9H972 538 aaKnown RBP12.37□□□□□ -0.43
ERGIC3-218ENST00000489071 NUTM2FA1L443 756 aa12.36□□□□□ -0.43
ERGIC3-218ENST00000489071 RGS12O14924 1447 aa12.36□□□□□ -0.43
ERGIC3-218ENST00000489071 PXDNQ92626 1479 aa12.35□□□□□ -0.43
ERGIC3-218ENST00000489071 PLEKHH1Q9ULM0 1364 aa12.35□□□□□ -0.43
ERGIC3-218ENST00000489071 FMN2Q9NZ56 1722 aa12.35□□□□□ -0.43
ERGIC3-218ENST00000489071 MARF1Q9Y4F3 1742 aaKnown RBP12.35□□□□□ -0.43
ERGIC3-218ENST00000489071 KIF1AQ12756 1690 aa12.35□□□□□ -0.43
ERGIC3-218ENST00000489071 MYOM2P54296 1465 aa12.34□□□□□ -0.43
ERGIC3-218ENST00000489071 XPCQ01831 940 aaPredicted RBP12.34□□□□□ -0.43
ERGIC3-218ENST00000489071 NRXN1Q9ULB1 1477 aa12.34□□□□□ -0.43
ERGIC3-218ENST00000489071 CFAP70Q5T0N1 1121 aa12.33□□□□□ -0.44
ERGIC3-218ENST00000489071 RGPD8O14715 1765 aaPredicted RBP12.33□□□□□ -0.44
ERGIC3-218ENST00000489071 ATRNO75882 1429 aa12.32□□□□□ -0.44
ERGIC3-218ENST00000489071 PSME1Q06323 249 aa12.31□□□□□ -0.44
ERGIC3-218ENST00000489071 FKBP8Q14318 412 aa12.31□□□□□ -0.44
ERGIC3-218ENST00000489071 KRT28Q7Z3Y7 464 aa12.31□□□□□ -0.44
ERGIC3-218ENST00000489071 PHF8Q9UPP1 1060 aa12.31□□□□□ -0.44
ERGIC3-218ENST00000489071 SPATA31A3Q5VYP0 1347 aa12.31□□□□□ -0.44
ERGIC3-218ENST00000489071 ATAD2Q6PL18 1390 aa12.3□□□□□ -0.44
ERGIC3-218ENST00000489071 STAC3Q96MF2 364 aa12.3□□□□□ -0.44
ERGIC3-218ENST00000489071 PRAM1Q96QH2 718 aa12.3□□□□□ -0.44
ERGIC3-218ENST00000489071 POGKQ9P215 609 aa12.3□□□□□ -0.44
ERGIC3-218ENST00000489071 BCL9LQ86UU0 1499 aa12.29□□□□□ -0.44
ERGIC3-218ENST00000489071 DLC1Q96QB1 1528 aa12.29□□□□□ -0.44
ERGIC3-218ENST00000489071 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.28□□□□□ -0.44
ERGIC3-218ENST00000489071 HAP1P54257 671 aaPredicted RBP12.28□□□□□ -0.44
ERGIC3-218ENST00000489071 SAFB2Q14151 953 aaKnown RBP eCLIP12.28□□□□□ -0.44
ERGIC3-218ENST00000489071 GJD4Q96KN9 370 aaPredicted RBP12.28□□□□□ -0.44
ERGIC3-218ENST00000489071 UNC5CLQ8IV45 518 aa12.27□□□□□ -0.45
ERGIC3-218ENST00000489071 SBNO1A3KN83 1393 aa12.27□□□□□ -0.45
ERGIC3-218ENST00000489071 TNS3Q68CZ2 1445 aa12.27□□□□□ -0.45
ERGIC3-218ENST00000489071 ANKARQ7Z5J8 1434 aa12.27□□□□□ -0.45
ERGIC3-218ENST00000489071 KDM2AQ9Y2K7 1162 aa12.26□□□□□ -0.45
ERGIC3-218ENST00000489071 USP32Q8NFA0 1604 aa12.26□□□□□ -0.45
ERGIC3-218ENST00000489071 LMOD2Q6P5Q4 547 aa12.25□□□□□ -0.45
ERGIC3-218ENST00000489071 CCDC125Q86Z20 511 aa12.25□□□□□ -0.45
ERGIC3-218ENST00000489071 DCAF11Q8TEB1 546 aa12.25□□□□□ -0.45
ERGIC3-218ENST00000489071 ZNF219Q9P2Y4 722 aaPredicted RBP12.25□□□□□ -0.45
ERGIC3-218ENST00000489071 TRAK1Q9UPV9 953 aa12.25□□□□□ -0.45
ERGIC3-218ENST00000489071 ARHGEF10O15013 1369 aa12.25□□□□□ -0.45
ERGIC3-218ENST00000489071 EIF3AQ14152 1382 aaKnown RBP12.25□□□□□ -0.45
ERGIC3-218ENST00000489071 SLIT2O94813 1529 aa12.25□□□□□ -0.45
ERGIC3-218ENST00000489071 ADGRB1O14514 1584 aa12.25□□□□□ -0.45
ERGIC3-218ENST00000489071 ADGRB2O60241 1585 aa12.25□□□□□ -0.45
ERGIC3-218ENST00000489071 TONSLQ96HA7 1378 aa12.24□□□□□ -0.45
ERGIC3-218ENST00000489071 PMFBP1Q8TBY8 1022 aa12.23□□□□□ -0.45
ERGIC3-218ENST00000489071 SIN3AQ96ST3 1273 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms