RNA–Protein interactions for RNA: ENST00000488956.5

SHCBP1L-204, Transcript of SHC binding and spindle associated 1 like, humanhuman

TSL 2

Gene SHCBP1L, Length 2,540 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1L-204ENST00000488956 KIDINS220Q9ULH0 1771 aa25.23■■□□□ 1.63
SHCBP1L-204ENST00000488956 SHPRHQ149N8 1683 aa25.23■■□□□ 1.63
SHCBP1L-204ENST00000488956 TNNT2P45379 298 aaPredicted RBP25.22■■□□□ 1.63
SHCBP1L-204ENST00000488956 NEUROD2Q15784 382 aa25.22■■□□□ 1.63
SHCBP1L-204ENST00000488956 TCP11L2Q8N4U5 519 aa25.21■■□□□ 1.63
SHCBP1L-204ENST00000488956 PHF23Q9BUL5 403 aaPredicted RBP25.21■■□□□ 1.63
SHCBP1L-204ENST00000488956 RARSP54136 660 aaKnown RBP25.2■■□□□ 1.62
SHCBP1L-204ENST00000488956 AAMPQ13685 434 aa25.2■■□□□ 1.62
SHCBP1L-204ENST00000488956 FRAT1Q92837 279 aaPredicted RBP25.2■■□□□ 1.62
SHCBP1L-204ENST00000488956 WDR63Q8IWG1 891 aa25.2■■□□□ 1.62
SHCBP1L-204ENST00000488956 IL27Q8NEV9 243 aa25.2■■□□□ 1.62
SHCBP1L-204ENST00000488956 RRP7AQ9Y3A4 280 aaKnown RBP25.19■■□□□ 1.62
SHCBP1L-204ENST00000488956 IQSEC2Q5JU85 1478 aa25.19■■□□□ 1.62
SHCBP1L-204ENST00000488956 ZNF518AQ6AHZ1 1483 aa25.18■■□□□ 1.62
SHCBP1L-204ENST00000488956 ASXL2Q76L83 1435 aa25.17■■□□□ 1.62
SHCBP1L-204ENST00000488956 ZC3H13Q5T200 1668 aaKnown RBP25.17■■□□□ 1.62
SHCBP1L-204ENST00000488956 QRICH2Q9H0J4 1663 aa25.17■■□□□ 1.62
SHCBP1L-204ENST00000488956 VIRMAQ69YN4 1812 aaKnown RBP25.17■■□□□ 1.62
SHCBP1L-204ENST00000488956 ADGRB1O14514 1584 aa25.17■■□□□ 1.62
SHCBP1L-204ENST00000488956 PMFBP1Q8TBY8 1022 aa25.16■■□□□ 1.62
SHCBP1L-204ENST00000488956 CFAP53Q96M91 514 aa25.16■■□□□ 1.62
SHCBP1L-204ENST00000488956 USP19O94966 1318 aa25.16■■□□□ 1.62
SHCBP1L-204ENST00000488956 MTHFSP49914 203 aa25.16■■□□□ 1.62
SHCBP1L-204ENST00000488956 CCDC27Q2M243 656 aa25.16■■□□□ 1.62
SHCBP1L-204ENST00000488956 NPATQ14207 1427 aa25.16■■□□□ 1.62
SHCBP1L-204ENST00000488956 PPLO60437 1756 aa25.15■■□□□ 1.62
SHCBP1L-204ENST00000488956 RPGRIP1LQ68CZ1 1315 aa25.15■■□□□ 1.62
SHCBP1L-204ENST00000488956 TMEM132EQ6IEE7 984 aa25.15■■□□□ 1.62
SHCBP1L-204ENST00000488956 USP32Q8NFA0 1604 aa25.15■■□□□ 1.62
SHCBP1L-204ENST00000488956 NCBP3Q53F19 620 aaKnown RBP25.12■■□□□ 1.61
SHCBP1L-204ENST00000488956 PUS7Q96PZ0 661 aaKnown RBP25.12■■□□□ 1.61
SHCBP1L-204ENST00000488956 FRAT2O75474 233 aaPredicted RBP25.11■■□□□ 1.61
SHCBP1L-204ENST00000488956 SEC24BO95487 1268 aa25.1■■□□□ 1.61
SHCBP1L-204ENST00000488956 GGT6Q6P531 493 aa25.1■■□□□ 1.61
SHCBP1L-204ENST00000488956 RLBP1P12271 317 aa25.09■■□□□ 1.61
SHCBP1L-204ENST00000488956 MYH16Q9H6N6 1097 aa25.09■■□□□ 1.61
SHCBP1L-204ENST00000488956 PCDHB15Q9Y5E8 787 aa25.09■■□□□ 1.61
SHCBP1L-204ENST00000488956 NSD2O96028 1365 aa25.08■■□□□ 1.61
SHCBP1L-204ENST00000488956 EVC2Q86UK5 1308 aa25.08■■□□□ 1.6
SHCBP1L-204ENST00000488956 ZMYM3Q14202 1370 aa25.07■■□□□ 1.6
SHCBP1L-204ENST00000488956 BECN1Q14457 450 aa25.07■■□□□ 1.6
SHCBP1L-204ENST00000488956 ANKRD36BQ8N2N9 1353 aa25.06■■□□□ 1.6
SHCBP1L-204ENST00000488956 BCL2L13Q9BXK5 485 aa25.06■■□□□ 1.6
SHCBP1L-204ENST00000488956 TNNQ9UQP3 1299 aa25.06■■□□□ 1.6
SHCBP1L-204ENST00000488956 CFAP65Q6ZU64 1925 aaKnown RBP25.05■■□□□ 1.6
SHCBP1L-204ENST00000488956 RWDD1Q9H446 243 aaPredicted RBP25.05■■□□□ 1.6
SHCBP1L-204ENST00000488956 U2AF1L5P0DN76 240 aaPredicted RBP25.04■■□□□ 1.6
SHCBP1L-204ENST00000488956 U2AF1Q01081 240 aaKnown RBP eCLIP25.04■■□□□ 1.6
SHCBP1L-204ENST00000488956 FRMPD1Q5SYB0 1578 aa25.04■■□□□ 1.6
SHCBP1L-204ENST00000488956 MLH3Q9UHC1 1453 aa25.04■■□□□ 1.6
SHCBP1L-204ENST00000488956 POGZQ7Z3K3 1410 aa25.03■■□□□ 1.6
SHCBP1L-204ENST00000488956 RTN4Q9NQC3 1192 aaKnown RBP25.03■■□□□ 1.6
SHCBP1L-204ENST00000488956 PDZRN3Q9UPQ7 1066 aa25.03■■□□□ 1.6
SHCBP1L-204ENST00000488956 GLI2P10070 1586 aa25.02■■□□□ 1.6
SHCBP1L-204ENST00000488956 UPF2Q9HAU5 1272 aaKnown RBP25.02■■□□□ 1.6
SHCBP1L-204ENST00000488956 NLRP1Q9C000 1473 aa25.02■■□□□ 1.6
SHCBP1L-204ENST00000488956 VGFO15240 615 aaPredicted RBP25.02■■□□□ 1.6
SHCBP1L-204ENST00000488956 HECW2Q9P2P5 1572 aa25.01■■□□□ 1.59
SHCBP1L-204ENST00000488956 TULP4Q9NRJ4 1543 aa25.01■■□□□ 1.59
SHCBP1L-204ENST00000488956 ABCC3O15438 1527 aa25■■□□□ 1.59
SHCBP1L-204ENST00000488956 BRPF3Q9ULD4 1205 aa25■■□□□ 1.59
SHCBP1L-204ENST00000488956 MVPQ14764 893 aaKnown RBP25■■□□□ 1.59
SHCBP1L-204ENST00000488956 CT47B1P0C2W7 299 aaPredicted RBP24.99■■□□□ 1.59
SHCBP1L-204ENST00000488956 ZKSCAN2Q63HK3 967 aa24.99■■□□□ 1.59
SHCBP1L-204ENST00000488956 CFAP74Q9C0B2 1584 aa24.98■■□□□ 1.59
SHCBP1L-204ENST00000488956 ADGRB2O60241 1585 aa24.97■■□□□ 1.59
SHCBP1L-204ENST00000488956 CD109Q6YHK3 1445 aa24.97■■□□□ 1.59
SHCBP1L-204ENST00000488956 NPM1P06748 294 aaKnown RBP eCLIP24.97■■□□□ 1.59
SHCBP1L-204ENST00000488956 CABP2Q9NPB3 220 aa24.97■■□□□ 1.59
SHCBP1L-204ENST00000488956 ARHGEF28Q8N1W1 1705 aaKnown RBP24.97■■□□□ 1.59
SHCBP1L-204ENST00000488956 NUTM2DQ5VT03 806 aaPredicted RBP24.96■■□□□ 1.59
SHCBP1L-204ENST00000488956 TBC1D32Q96NH3 1257 aa24.96■■□□□ 1.59
SHCBP1L-204ENST00000488956 FTSJ3Q8IY81 847 aaKnown RBP24.95■■□□□ 1.59
SHCBP1L-204ENST00000488956 DZIP1LQ8IYY4 767 aaKnown RBP24.95■■□□□ 1.59
SHCBP1L-204ENST00000488956 CAMSAP1Q5T5Y3 1602 aa24.94■■□□□ 1.58
SHCBP1L-204ENST00000488956 NEXMIFQ5QGS0 1516 aa24.93■■□□□ 1.58
SHCBP1L-204ENST00000488956 ABCC11Q96J66 1382 aa24.92■■□□□ 1.58
SHCBP1L-204ENST00000488956 PIK3C2BO00750 1634 aa24.92■■□□□ 1.58
SHCBP1L-204ENST00000488956 TSR2Q969E8 191 aaKnown RBP24.91■■□□□ 1.58
SHCBP1L-204ENST00000488956 PLEKHF1Q96S99 279 aa24.91■■□□□ 1.58
SHCBP1L-204ENST00000488956 SLKQ9H2G2 1235 aaPredicted RBP24.91■■□□□ 1.58
SHCBP1L-204ENST00000488956 A0A1W2PP64 1363 aa24.9■■□□□ 1.58
SHCBP1L-204ENST00000488956 SMC4Q9NTJ3 1288 aa24.9■■□□□ 1.58
SHCBP1L-204ENST00000488956 SIGLEC1Q9BZZ2 1709 aa24.9■■□□□ 1.58
SHCBP1L-204ENST00000488956 U2SURPO15042 1029 aaKnown RBP24.89■■□□□ 1.58
SHCBP1L-204ENST00000488956 TMPOP42166 694 aaKnown RBP24.89■■□□□ 1.58
SHCBP1L-204ENST00000488956 EXOSC9Q06265 439 aaKnown RBP24.89■■□□□ 1.58
SHCBP1L-204ENST00000488956 SAFB2Q14151 953 aaKnown RBP eCLIP24.89■■□□□ 1.58
SHCBP1L-204ENST00000488956 ANTXR1Q9H6X2 564 aa24.89■■□□□ 1.57
SHCBP1L-204ENST00000488956 SRPK2P78362 688 aaKnown RBP24.87■■□□□ 1.57
SHCBP1L-204ENST00000488956 GGNBP2Q9H3C7 697 aa24.87■■□□□ 1.57
SHCBP1L-204ENST00000488956 TRIM35Q9UPQ4 493 aa24.87■■□□□ 1.57
SHCBP1L-204ENST00000488956 TBC1D2Q9BYX2 928 aa24.86■■□□□ 1.57
SHCBP1L-204ENST00000488956 TRIM27P14373 513 aa24.86■■□□□ 1.57
SHCBP1L-204ENST00000488956 HDAC1Q13547 482 aaPredicted RBP24.86■■□□□ 1.57
SHCBP1L-204ENST00000488956 DDX19BQ9UMR2 479 aa24.86■■□□□ 1.57
SHCBP1L-204ENST00000488956 ZFYVE9O95405 1425 aa24.86■■□□□ 1.57
SHCBP1L-204ENST00000488956 IL16Q14005 1332 aa24.85■■□□□ 1.57
SHCBP1L-204ENST00000488956 SSH1Q8WYL5 1049 aa24.85■■□□□ 1.57
SHCBP1L-204ENST00000488956 COL3A1P02461 1466 aaPredicted RBP24.84■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms