RNA–Protein interactions for RNA: ENST00000488914.1

CTNNB1-215, Transcript of catenin beta 1, humanhuman

TSL 2

Gene CTNNB1, Length 804 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNB1-215ENST00000488914 NUTM1Q86Y26 1132 aa11.21□□□□□ -0.61
CTNNB1-215ENST00000488914 USB1Q9BQ65 265 aaKnown RBP11.21□□□□□ -0.61
CTNNB1-215ENST00000488914 TNFRSF10AO00220 468 aa11.2□□□□□ -0.62
CTNNB1-215ENST00000488914 GDF9O60383 454 aa11.2□□□□□ -0.62
CTNNB1-215ENST00000488914 TRAF7Q6Q0C0 670 aa11.2□□□□□ -0.62
CTNNB1-215ENST00000488914 PARP9Q8IXQ6 854 aa11.2□□□□□ -0.62
CTNNB1-215ENST00000488914 SPIRE2Q8WWL2 714 aa11.2□□□□□ -0.62
CTNNB1-215ENST00000488914 PCDHGC3Q9UN70 934 aa11.2□□□□□ -0.62
CTNNB1-215ENST00000488914 MMP16P51512 607 aa11.19□□□□□ -0.62
CTNNB1-215ENST00000488914 NDUFV2P19404 249 aa11.18□□□□□ -0.62
CTNNB1-215ENST00000488914 AK7Q96M32 723 aa11.18□□□□□ -0.62
CTNNB1-215ENST00000488914 MS4A1P11836 297 aa11.17□□□□□ -0.62
CTNNB1-215ENST00000488914 SLC24A3Q9HC58 644 aa11.17□□□□□ -0.62
CTNNB1-215ENST00000488914 PKD2L1Q9P0L9 805 aa11.17□□□□□ -0.62
CTNNB1-215ENST00000488914 MOXD2PA6NHM9 499 aa11.16□□□□□ -0.62
CTNNB1-215ENST00000488914 DXOO77932 396 aaKnown RBP11.16□□□□□ -0.62
CTNNB1-215ENST00000488914 RPIAP49247 311 aa11.16□□□□□ -0.62
CTNNB1-215ENST00000488914 PRR20EP86478 221 aa11.16□□□□□ -0.62
CTNNB1-215ENST00000488914 PRR20CP86479 221 aa11.16□□□□□ -0.62
CTNNB1-215ENST00000488914 PRR20DP86480 221 aa11.16□□□□□ -0.62
CTNNB1-215ENST00000488914 PRR20BP86481 221 aa11.16□□□□□ -0.62
CTNNB1-215ENST00000488914 PRR20AP86496 221 aa11.16□□□□□ -0.62
CTNNB1-215ENST00000488914 FOXC1Q12948 553 aa11.16□□□□□ -0.62
CTNNB1-215ENST00000488914 BEGAINQ9BUH8 593 aa11.16□□□□□ -0.62
CTNNB1-215ENST00000488914 FDX1P10109 184 aa11.15□□□□□ -0.62
CTNNB1-215ENST00000488914 CD2BP2O95400 341 aaKnown RBP11.11□□□□□ -0.63
CTNNB1-215ENST00000488914 PDE4DQ08499 809 aa11.11□□□□□ -0.63
CTNNB1-215ENST00000488914 CCDC24Q8N4L8 307 aa11.11□□□□□ -0.63
CTNNB1-215ENST00000488914 C6orf229H3BNL8 230 aa11.1□□□□□ -0.63
CTNNB1-215ENST00000488914 TBC1D2Q9BYX2 928 aa11.1□□□□□ -0.63
CTNNB1-215ENST00000488914 ZBTB24O43167 697 aaPredicted RBP11.09□□□□□ -0.63
CTNNB1-215ENST00000488914 SLC24A1O60721 1099 aa11.09□□□□□ -0.63
CTNNB1-215ENST00000488914 JUNDP17535 347 aa11.09□□□□□ -0.63
CTNNB1-215ENST00000488914 RETREG3Q86VR2 466 aa11.09□□□□□ -0.63
CTNNB1-215ENST00000488914 FAM187AA6NFU0 413 aa11.08□□□□□ -0.64
CTNNB1-215ENST00000488914 TRIM32Q13049 653 aa11.08□□□□□ -0.64
CTNNB1-215ENST00000488914 MYT1Q01538 1121 aa11.07□□□□□ -0.64
CTNNB1-215ENST00000488914 PKDCCQ504Y2 493 aa11.07□□□□□ -0.64
CTNNB1-215ENST00000488914 PCDHB15Q9Y5E8 787 aa11.07□□□□□ -0.64
CTNNB1-215ENST00000488914 DGAT1O75907 488 aa11.06□□□□□ -0.64
CTNNB1-215ENST00000488914 PTCRAQ6ISU1 281 aaPredicted RBP11.06□□□□□ -0.64
CTNNB1-215ENST00000488914 TOR4AQ9NXH8 423 aa11.05□□□□□ -0.64
CTNNB1-215ENST00000488914 RSBN1LQ6PCB5 846 aaPredicted RBP11.04□□□□□ -0.64
CTNNB1-215ENST00000488914 SKOR1P84550 965 aa11.02□□□□□ -0.65
CTNNB1-215ENST00000488914 PRR7Q8TB68 274 aa11.02□□□□□ -0.65
CTNNB1-215ENST00000488914 BCANQ96GW7 911 aa11.02□□□□□ -0.65
CTNNB1-215ENST00000488914 NUDT12Q9BQG2 462 aa11.02□□□□□ -0.65
CTNNB1-215ENST00000488914 SPTLC1O15269 473 aa11.01□□□□□ -0.65
CTNNB1-215ENST00000488914 ST8SIA5O15466 376 aa11.01□□□□□ -0.65
CTNNB1-215ENST00000488914 MTMR2Q13614 643 aa11.01□□□□□ -0.65
CTNNB1-215ENST00000488914 WNT7AO00755 349 aa11□□□□□ -0.65
CTNNB1-215ENST00000488914 RIC3Q7Z5B4 369 aa11□□□□□ -0.65
CTNNB1-215ENST00000488914 CYP4X1Q8N118 509 aa11□□□□□ -0.65
CTNNB1-215ENST00000488914 MRGPRX2Q96LB1 330 aa11□□□□□ -0.65
CTNNB1-215ENST00000488914 CSPP1Q1MSJ5 1256 aa10.99□□□□□ -0.65
CTNNB1-215ENST00000488914 CABLES1Q8TDN4 633 aa10.99□□□□□ -0.65
CTNNB1-215ENST00000488914 LIMD1Q9UGP4 676 aa10.99□□□□□ -0.65
CTNNB1-215ENST00000488914 POTECB2RU33 542 aa10.98□□□□□ -0.65
CTNNB1-215ENST00000488914 HRCP23327 699 aa10.98□□□□□ -0.65
CTNNB1-215ENST00000488914 MYSM1Q5VVJ2 828 aa10.98□□□□□ -0.65
CTNNB1-215ENST00000488914 CFAP99D6REC4 459 aa10.97□□□□□ -0.65
CTNNB1-215ENST00000488914 GJA5P36382 358 aa10.97□□□□□ -0.65
CTNNB1-215ENST00000488914 DIXDC1Q155Q3 683 aa10.97□□□□□ -0.65
CTNNB1-215ENST00000488914 ZNF787Q6DD87 383 aa10.97□□□□□ -0.65
CTNNB1-215ENST00000488914 CCNYL3P0C7X3 344 aa10.96□□□□□ -0.65
CTNNB1-215ENST00000488914 RC3H1Q5TC82 1133 aaKnown RBP10.96□□□□□ -0.65
CTNNB1-215ENST00000488914 AAASQ9NRG9 546 aa10.96□□□□□ -0.65
CTNNB1-215ENST00000488914 TTC24A2A3L6 582 aaPredicted RBP10.95□□□□□ -0.66
CTNNB1-215ENST00000488914 J3QL48 77 aa10.95□□□□□ -0.66
CTNNB1-215ENST00000488914 SMPD1P17405 629 aa10.95□□□□□ -0.66
CTNNB1-215ENST00000488914 PTPRNQ16849 979 aa10.95□□□□□ -0.66
CTNNB1-215ENST00000488914 EVA1BQ9NVM1 165 aa10.95□□□□□ -0.66
CTNNB1-215ENST00000488914 DACH1Q9UI36 760 aa10.95□□□□□ -0.66
CTNNB1-215ENST00000488914 SPDYE5A6NIY4 337 aa10.94□□□□□ -0.66
CTNNB1-215ENST00000488914 QPCTQ16769 361 aa10.94□□□□□ -0.66
CTNNB1-215ENST00000488914 SNIP1Q8TAD8 396 aaKnown RBP10.94□□□□□ -0.66
CTNNB1-215ENST00000488914 GPBP1L1Q9HC44 474 aaPredicted RBP10.94□□□□□ -0.66
CTNNB1-215ENST00000488914 WNT7BP56706 349 aa10.93□□□□□ -0.66
CTNNB1-215ENST00000488914 ZBTB3Q9H5J0 574 aa10.93□□□□□ -0.66
CTNNB1-215ENST00000488914 DESI1Q6ICB0 168 aa10.92□□□□□ -0.66
CTNNB1-215ENST00000488914 UNC93B1Q9H1C4 597 aa10.92□□□□□ -0.66
CTNNB1-215ENST00000488914 AVPP01185 164 aa10.91□□□□□ -0.66
CTNNB1-215ENST00000488914 SH3BP2P78314 561 aa10.91□□□□□ -0.66
CTNNB1-215ENST00000488914 KCNH2Q12809 1159 aa10.91□□□□□ -0.66
CTNNB1-215ENST00000488914 LYPD8Q6UX82 237 aa10.91□□□□□ -0.66
CTNNB1-215ENST00000488914 LINC01559Q495D7 138 aa10.9□□□□□ -0.66
CTNNB1-215ENST00000488914 PRPF38BQ5VTL8 546 aaKnown RBP10.9□□□□□ -0.66
CTNNB1-215ENST00000488914 BAP1Q92560 729 aa10.9□□□□□ -0.66
CTNNB1-215ENST00000488914 POLR3EQ9NVU0 708 aa10.9□□□□□ -0.66
CTNNB1-215ENST00000488914 PER1O15534 1290 aaPredicted RBP10.89□□□□□ -0.67
CTNNB1-215ENST00000488914 RTL5Q5HYW3 569 aaPredicted RBP10.89□□□□□ -0.67
CTNNB1-215ENST00000488914 SIAH2O43255 324 aa10.88□□□□□ -0.67
CTNNB1-215ENST00000488914 LILRB3O75022 631 aa10.88□□□□□ -0.67
CTNNB1-215ENST00000488914 CRIPAKQ8N1N5 446 aa10.88□□□□□ -0.67
CTNNB1-215ENST00000488914 MAP10Q9P2G4 905 aa10.88□□□□□ -0.67
CTNNB1-215ENST00000488914 NUTM2BA6NNL0 878 aaPredicted RBP10.87□□□□□ -0.67
CTNNB1-215ENST00000488914 NUTM2EB1AL46 878 aaPredicted RBP10.87□□□□□ -0.67
CTNNB1-215ENST00000488914 NUTM2DQ5VT03 806 aaPredicted RBP10.87□□□□□ -0.67
CTNNB1-215ENST00000488914 NUTM2AQ8IVF1 878 aaPredicted RBP10.87□□□□□ -0.67
CTNNB1-215ENST00000488914 HPS1Q92902 700 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms