RNA–Protein interactions for RNA: ENST00000488864.5

CHD1L-208, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 2

Gene CHD1L, Length 2,415 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-208ENST00000488864 MINK1Q8N4C8 1332 aaPredicted RBP18.11■□□□□ 0.49
CHD1L-208ENST00000488864 ABCC11Q96J66 1382 aa18.11■□□□□ 0.49
CHD1L-208ENST00000488864 IRX6P78412 446 aaPredicted RBP18.1■□□□□ 0.49
CHD1L-208ENST00000488864 POLR1AO95602 1720 aaPredicted RBP18.09■□□□□ 0.49
CHD1L-208ENST00000488864 ROBO2Q9HCK4 1378 aa18.09■□□□□ 0.49
CHD1L-208ENST00000488864 KCNA6P17658 529 aa18.08■□□□□ 0.49
CHD1L-208ENST00000488864 QRICH2Q9H0J4 1663 aa18.08■□□□□ 0.48
CHD1L-208ENST00000488864 HNRNPUQ00839 825 aaKnown RBP eCLIP18.07■□□□□ 0.48
CHD1L-208ENST00000488864 RBM33Q96EV2 1170 aaKnown RBP18.06■□□□□ 0.48
CHD1L-208ENST00000488864 DIP2AQ14689 1571 aa18.06■□□□□ 0.48
CHD1L-208ENST00000488864 SBNO2Q9Y2G9 1366 aa18.05■□□□□ 0.48
CHD1L-208ENST00000488864 TECPR2O15040 1411 aa18.05■□□□□ 0.48
CHD1L-208ENST00000488864 DLC1Q96QB1 1528 aa18.04■□□□□ 0.48
CHD1L-208ENST00000488864 CABP2Q9NPB3 220 aa18.03■□□□□ 0.48
CHD1L-208ENST00000488864 EVC2Q86UK5 1308 aa18.02■□□□□ 0.48
CHD1L-208ENST00000488864 FANCIQ9NVI1 1328 aa18.02■□□□□ 0.48
CHD1L-208ENST00000488864 SRPK2P78362 688 aaKnown RBP18.02■□□□□ 0.47
CHD1L-208ENST00000488864 CDCA8Q53HL2 280 aa18.02■□□□□ 0.47
CHD1L-208ENST00000488864 PIK3R4Q99570 1358 aa18.01■□□□□ 0.47
CHD1L-208ENST00000488864 CPS1P31327 1500 aa18.01■□□□□ 0.47
CHD1L-208ENST00000488864 CNGB1Q14028 1251 aaPredicted RBP18.01■□□□□ 0.47
CHD1L-208ENST00000488864 FAM135BQ49AJ0 1406 aa18.01■□□□□ 0.47
CHD1L-208ENST00000488864 TULP4Q9NRJ4 1543 aa18.01■□□□□ 0.47
CHD1L-208ENST00000488864 KNDC1Q76NI1 1749 aa18■□□□□ 0.47
CHD1L-208ENST00000488864 STRCQ7RTU9 1775 aa18■□□□□ 0.47
CHD1L-208ENST00000488864 SLC24A1O60721 1099 aa18■□□□□ 0.47
CHD1L-208ENST00000488864 SIRT1Q96EB6 747 aa18■□□□□ 0.47
CHD1L-208ENST00000488864 CDK19Q9BWU1 502 aa17.99■□□□□ 0.47
CHD1L-208ENST00000488864 TMC1Q8TDI8 760 aa17.99■□□□□ 0.47
CHD1L-208ENST00000488864 XRN1Q8IZH2 1706 aaKnown RBP17.98■□□□□ 0.47
CHD1L-208ENST00000488864 CHD2O14647 1828 aaKnown RBP17.98■□□□□ 0.47
CHD1L-208ENST00000488864 NUTM2FA1L443 756 aa17.98■□□□□ 0.47
CHD1L-208ENST00000488864 PTCH1Q13635 1447 aa17.98■□□□□ 0.47
CHD1L-208ENST00000488864 PANK3Q9H999 370 aa17.97■□□□□ 0.47
CHD1L-208ENST00000488864 SLC12A5Q9H2X9 1139 aa17.96■□□□□ 0.47
CHD1L-208ENST00000488864 WASLO00401 505 aaPredicted RBP17.96■□□□□ 0.46
CHD1L-208ENST00000488864 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.95■□□□□ 0.46
CHD1L-208ENST00000488864 CCDC184Q52MB2 194 aa17.93■□□□□ 0.46
CHD1L-208ENST00000488864 C14orf37Q86TY3 774 aa17.93■□□□□ 0.46
CHD1L-208ENST00000488864 PROSER2Q86WR7 435 aaPredicted RBP17.93■□□□□ 0.46
CHD1L-208ENST00000488864 ZNF335Q9H4Z2 1342 aaPredicted RBP17.92■□□□□ 0.46
CHD1L-208ENST00000488864 AEBP2Q6ZN18 517 aaPredicted RBP17.91■□□□□ 0.46
CHD1L-208ENST00000488864 ERICH6Q7L0X2 663 aa17.91■□□□□ 0.46
CHD1L-208ENST00000488864 MYOM1P52179 1685 aa17.9■□□□□ 0.46
CHD1L-208ENST00000488864 CABP1Q9NZU7 370 aa17.9■□□□□ 0.46
CHD1L-208ENST00000488864 NUDT16Q96DE0 195 aaKnown RBP17.89■□□□□ 0.45
CHD1L-208ENST00000488864 PPP4R2Q9NY27 417 aa17.89■□□□□ 0.45
CHD1L-208ENST00000488864 PRR36Q9H6K5 1346 aa17.88■□□□□ 0.45
CHD1L-208ENST00000488864 ATAD2Q6PL18 1390 aa17.88■□□□□ 0.45
CHD1L-208ENST00000488864 STRCP1A6NGW2 1772 aa17.88■□□□□ 0.45
CHD1L-208ENST00000488864 PER1O15534 1290 aaPredicted RBP17.88■□□□□ 0.45
CHD1L-208ENST00000488864 NWD1Q149M9 1564 aa17.88■□□□□ 0.45
CHD1L-208ENST00000488864 PUS7Q96PZ0 661 aaKnown RBP17.88■□□□□ 0.45
CHD1L-208ENST00000488864 CARD14Q9BXL6 1004 aa17.87■□□□□ 0.45
CHD1L-208ENST00000488864 DMRT2Q9Y5R5 561 aa17.87■□□□□ 0.45
CHD1L-208ENST00000488864 TMEM94Q12767 1356 aa17.86■□□□□ 0.45
CHD1L-208ENST00000488864 ERICH6BQ5W0A0 696 aa17.86■□□□□ 0.45
CHD1L-208ENST00000488864 CC2D1BQ5T0F9 858 aaKnown RBP17.85■□□□□ 0.45
CHD1L-208ENST00000488864 KNSTRNQ9Y448 316 aa17.85■□□□□ 0.45
CHD1L-208ENST00000488864 CCDC61Q9Y6R9 512 aa17.85■□□□□ 0.45
CHD1L-208ENST00000488864 ADGRB2O60241 1585 aa17.85■□□□□ 0.45
CHD1L-208ENST00000488864 NKTRP30414 1462 aaKnown RBP17.84■□□□□ 0.45
CHD1L-208ENST00000488864 NALCNQ8IZF0 1738 aa17.84■□□□□ 0.45
CHD1L-208ENST00000488864 B4GALNT3Q6L9W6 998 aa17.83■□□□□ 0.45
CHD1L-208ENST00000488864 PPIP5K1Q6PFW1 1433 aa17.83■□□□□ 0.45
CHD1L-208ENST00000488864 ATP7BP35670 1465 aa17.83■□□□□ 0.45
CHD1L-208ENST00000488864 ADGRL3Q9HAR2 1447 aa17.83■□□□□ 0.44
CHD1L-208ENST00000488864 PRKRIP1Q9H875 184 aaPredicted RBP17.82■□□□□ 0.44
CHD1L-208ENST00000488864 A0A1W2PP64 1363 aa17.82■□□□□ 0.44
CHD1L-208ENST00000488864 PMFBP1Q8TBY8 1022 aa17.82■□□□□ 0.44
CHD1L-208ENST00000488864 FAM9BQ8IZU0 186 aa17.81■□□□□ 0.44
CHD1L-208ENST00000488864 ANKRD36BQ8N2N9 1353 aa17.8■□□□□ 0.44
CHD1L-208ENST00000488864 TERF2IPQ9NYB0 399 aa17.8■□□□□ 0.44
CHD1L-208ENST00000488864 NSD3Q9BZ95 1437 aa17.8■□□□□ 0.44
CHD1L-208ENST00000488864 C19orf44Q9H6X5 657 aa17.8■□□□□ 0.44
CHD1L-208ENST00000488864 CD163L1Q9NR16 1453 aa17.79■□□□□ 0.44
CHD1L-208ENST00000488864 NINLQ9Y2I6 1382 aa17.79■□□□□ 0.44
CHD1L-208ENST00000488864 AMER1Q5JTC6 1135 aaPredicted RBP17.79■□□□□ 0.44
CHD1L-208ENST00000488864 HDGFL2Q7Z4V5 671 aaPredicted RBP17.79■□□□□ 0.44
CHD1L-208ENST00000488864 USP32Q8NFA0 1604 aa17.78■□□□□ 0.44
CHD1L-208ENST00000488864 RGPD8O14715 1765 aaPredicted RBP17.77■□□□□ 0.44
CHD1L-208ENST00000488864 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.77■□□□□ 0.432e-7■■■■□ 20.7
CHD1L-208ENST00000488864 CDC42BPGQ6DT37 1551 aa17.77■□□□□ 0.43
CHD1L-208ENST00000488864 LRRC7Q96NW7 1537 aa17.76■□□□□ 0.43
CHD1L-208ENST00000488864 ACEP12821 1306 aa17.76■□□□□ 0.43
CHD1L-208ENST00000488864 MRS2Q9HD23 443 aa17.76■□□□□ 0.43
CHD1L-208ENST00000488864 KTN1Q86UP2 1357 aaKnown RBP17.76■□□□□ 0.43
CHD1L-208ENST00000488864 ATF3P18847 181 aa17.76■□□□□ 0.43
CHD1L-208ENST00000488864 ESCO1Q5FWF5 840 aa17.76■□□□□ 0.43
CHD1L-208ENST00000488864 NGDNQ8NEJ9 315 aaKnown RBP17.75■□□□□ 0.43
CHD1L-208ENST00000488864 FMN2Q9NZ56 1722 aa17.75■□□□□ 0.43
CHD1L-208ENST00000488864 ORAI2Q96SN7 254 aa17.74■□□□□ 0.43
CHD1L-208ENST00000488864 ZBED9Q6R2W3 1325 aa17.74■□□□□ 0.43
CHD1L-208ENST00000488864 PLEKHG3A1L390 1219 aa17.73■□□□□ 0.43
CHD1L-208ENST00000488864 MSH6P52701 1360 aa17.73■□□□□ 0.43
CHD1L-208ENST00000488864 CPSF1Q10570 1443 aaKnown RBP17.73■□□□□ 0.43
CHD1L-208ENST00000488864 ANKARQ7Z5J8 1434 aa17.73■□□□□ 0.43
CHD1L-208ENST00000488864 CGNL1Q0VF96 1302 aa17.72■□□□□ 0.43
CHD1L-208ENST00000488864 GGNBP2Q9H3C7 697 aa17.72■□□□□ 0.43
CHD1L-208ENST00000488864 TOPAZ1Q8N9V7 1692 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms