RNA–Protein interactions for RNA: ENST00000488758.1

APOBEC3A-203, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3A, humanhuman

TSL 2

Gene APOBEC3A, Length 344 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3A-203ENST00000488758 SLIT1O75093 1534 aa10.55□□□□□ -0.72
APOBEC3A-203ENST00000488758 TRAK1Q9UPV9 953 aa10.55□□□□□ -0.72
APOBEC3A-203ENST00000488758 PLEKHG1Q9ULL1 1385 aa10.54□□□□□ -0.72
APOBEC3A-203ENST00000488758 SLC24A1O60721 1099 aa10.54□□□□□ -0.72
APOBEC3A-203ENST00000488758 STK26Q9P289 416 aa10.54□□□□□ -0.72
APOBEC3A-203ENST00000488758 SETBP1Q9Y6X0 1596 aa10.54□□□□□ -0.72
APOBEC3A-203ENST00000488758 ALKQ9UM73 1620 aa10.54□□□□□ -0.72
APOBEC3A-203ENST00000488758 ARHGAP23Q9P227 1491 aa10.54□□□□□ -0.72
APOBEC3A-203ENST00000488758 DIEXFQ68CQ4 756 aaKnown RBP10.53□□□□□ -0.72
APOBEC3A-203ENST00000488758 ZNF142P52746 1687 aaPredicted RBP10.53□□□□□ -0.72
APOBEC3A-203ENST00000488758 PIP4P2Q8N4L2 257 aa10.52□□□□□ -0.73
APOBEC3A-203ENST00000488758 POLR3GLQ9BT43 218 aa10.52□□□□□ -0.73
APOBEC3A-203ENST00000488758 TMF1P82094 1093 aa10.51□□□□□ -0.73
APOBEC3A-203ENST00000488758 DDX10Q13206 875 aaKnown RBP10.51□□□□□ -0.73
APOBEC3A-203ENST00000488758 SLC26A8Q96RN1 970 aa10.51□□□□□ -0.73
APOBEC3A-203ENST00000488758 POGKQ9P215 609 aa10.51□□□□□ -0.73
APOBEC3A-203ENST00000488758 TBX22Q9Y458 520 aa10.51□□□□□ -0.73
APOBEC3A-203ENST00000488758 ADGRB1O14514 1584 aa10.51□□□□□ -0.73
APOBEC3A-203ENST00000488758 IQGAP1P46940 1657 aa10.5□□□□□ -0.73
APOBEC3A-203ENST00000488758 C11orf95C9JLR9 678 aaPredicted RBP10.5□□□□□ -0.73
APOBEC3A-203ENST00000488758 CENPJQ9HC77 1338 aaPredicted RBP10.5□□□□□ -0.73
APOBEC3A-203ENST00000488758 CCDC7Q96M83 1385 aa10.5□□□□□ -0.73
APOBEC3A-203ENST00000488758 YTHDC2Q9H6S0 1430 aaKnown RBP10.5□□□□□ -0.73
APOBEC3A-203ENST00000488758 FXR2P51116 673 aaKnown RBP eCLIP10.49□□□□□ -0.73
APOBEC3A-203ENST00000488758 CDCA8Q53HL2 280 aa10.49□□□□□ -0.73
APOBEC3A-203ENST00000488758 TESK2Q96S53 571 aa10.49□□□□□ -0.73
APOBEC3A-203ENST00000488758 WASHC2AQ641Q2 1341 aa10.49□□□□□ -0.73
APOBEC3A-203ENST00000488758 NCKAP5LQ9HCH0 1330 aa10.49□□□□□ -0.73
APOBEC3A-203ENST00000488758 METP08581 1390 aa10.49□□□□□ -0.73
APOBEC3A-203ENST00000488758 LRPPRCP42704 1394 aaKnown RBP10.49□□□□□ -0.73
APOBEC3A-203ENST00000488758 ADAMTS13Q76LX8 1427 aa10.49□□□□□ -0.73
APOBEC3A-203ENST00000488758 KIF7Q2M1P5 1343 aa10.48□□□□□ -0.73
APOBEC3A-203ENST00000488758 IQSEC2Q5JU85 1478 aa10.48□□□□□ -0.73
APOBEC3A-203ENST00000488758 NRXN3Q9Y4C0 1643 aa10.47□□□□□ -0.73
APOBEC3A-203ENST00000488758 SAFB2Q14151 953 aaKnown RBP eCLIP10.47□□□□□ -0.73
APOBEC3A-203ENST00000488758 FKBP8Q14318 412 aa10.47□□□□□ -0.73
APOBEC3A-203ENST00000488758 PROM2Q8N271 834 aa10.47□□□□□ -0.73
APOBEC3A-203ENST00000488758 SIRT1Q96EB6 747 aa10.47□□□□□ -0.73
APOBEC3A-203ENST00000488758 PRAM1Q96QH2 718 aa10.47□□□□□ -0.73
APOBEC3A-203ENST00000488758 ABCC11Q96J66 1382 aa10.47□□□□□ -0.73
APOBEC3A-203ENST00000488758 ASXL1Q8IXJ9 1541 aa10.47□□□□□ -0.73
APOBEC3A-203ENST00000488758 AMOTL2Q9Y2J4 779 aa10.46□□□□□ -0.73
APOBEC3A-203ENST00000488758 NPHP4O75161 1426 aaPredicted RBP10.46□□□□□ -0.74
APOBEC3A-203ENST00000488758 MED14O60244 1454 aa10.46□□□□□ -0.74
APOBEC3A-203ENST00000488758 SETD1AO15047 1707 aaKnown RBP10.45□□□□□ -0.74
APOBEC3A-203ENST00000488758 DIP2AQ14689 1571 aa10.45□□□□□ -0.74
APOBEC3A-203ENST00000488758 WAPLQ7Z5K2 1190 aa10.45□□□□□ -0.74
APOBEC3A-203ENST00000488758 PIK3R4Q99570 1358 aa10.44□□□□□ -0.74
APOBEC3A-203ENST00000488758 SBNO2Q9Y2G9 1366 aa10.44□□□□□ -0.74
APOBEC3A-203ENST00000488758 EVC2Q86UK5 1308 aa10.44□□□□□ -0.74
APOBEC3A-203ENST00000488758 ZNF335Q9H4Z2 1342 aaPredicted RBP10.44□□□□□ -0.74
APOBEC3A-203ENST00000488758 UBAP1LF5GYI3 381 aa10.44□□□□□ -0.74
APOBEC3A-203ENST00000488758 POLR1AO95602 1720 aaPredicted RBP10.44□□□□□ -0.74
APOBEC3A-203ENST00000488758 MED1Q15648 1581 aaPredicted RBP10.43□□□□□ -0.74
APOBEC3A-203ENST00000488758 DLC1Q96QB1 1528 aa10.43□□□□□ -0.74
APOBEC3A-203ENST00000488758 MINK1Q8N4C8 1332 aaPredicted RBP10.43□□□□□ -0.74
APOBEC3A-203ENST00000488758 PRR29P0C7W0 189 aa10.43□□□□□ -0.74
APOBEC3A-203ENST00000488758 ARHGEF28Q8N1W1 1705 aaKnown RBP10.43□□□□□ -0.74
APOBEC3A-203ENST00000488758 QRICH2Q9H0J4 1663 aa10.42□□□□□ -0.74
APOBEC3A-203ENST00000488758 TECPR2O15040 1411 aa10.41□□□□□ -0.74
APOBEC3A-203ENST00000488758 FAM135BQ49AJ0 1406 aa10.41□□□□□ -0.74
APOBEC3A-203ENST00000488758 PTPRUQ92729 1446 aa10.41□□□□□ -0.74
APOBEC3A-203ENST00000488758 SRPK2P78362 688 aaKnown RBP10.41□□□□□ -0.74
APOBEC3A-203ENST00000488758 PUS7Q96PZ0 661 aaKnown RBP10.41□□□□□ -0.74
APOBEC3A-203ENST00000488758 PLEKHH1Q9ULM0 1364 aa10.4□□□□□ -0.74
APOBEC3A-203ENST00000488758 KCNA6P17658 529 aa10.4□□□□□ -0.74
APOBEC3A-203ENST00000488758 CDK19Q9BWU1 502 aa10.4□□□□□ -0.74
APOBEC3A-203ENST00000488758 KNDC1Q76NI1 1749 aa10.4□□□□□ -0.74
APOBEC3A-203ENST00000488758 ROBO2Q9HCK4 1378 aa10.39□□□□□ -0.75
APOBEC3A-203ENST00000488758 ANP32CO43423 234 aa10.39□□□□□ -0.75
APOBEC3A-203ENST00000488758 PRKAR2AP13861 404 aaKnown RBP10.39□□□□□ -0.75
APOBEC3A-203ENST00000488758 TMC1Q8TDI8 760 aa10.39□□□□□ -0.75
APOBEC3A-203ENST00000488758 CABP2Q9NPB3 220 aa10.39□□□□□ -0.75
APOBEC3A-203ENST00000488758 CPS1P31327 1500 aa10.38□□□□□ -0.75
APOBEC3A-203ENST00000488758 WASLO00401 505 aaPredicted RBP10.38□□□□□ -0.75
APOBEC3A-203ENST00000488758 PANK3Q9H999 370 aa10.38□□□□□ -0.75
APOBEC3A-203ENST00000488758 CHD2O14647 1828 aaKnown RBP10.37□□□□□ -0.75
APOBEC3A-203ENST00000488758 PTCH1Q13635 1447 aa10.37□□□□□ -0.75
APOBEC3A-203ENST00000488758 MIER1Q8N108 512 aa10.37□□□□□ -0.75
APOBEC3A-203ENST00000488758 HSPA1LP34931 641 aa10.36□□□□□ -0.75
APOBEC3A-203ENST00000488758 PIP4K2BP78356 416 aa10.36□□□□□ -0.75
APOBEC3A-203ENST00000488758 PROSER2Q86WR7 435 aaPredicted RBP10.36□□□□□ -0.75
APOBEC3A-203ENST00000488758 SLC12A5Q9H2X9 1139 aa10.36□□□□□ -0.75
APOBEC3A-203ENST00000488758 ATAD2Q6PL18 1390 aa10.36□□□□□ -0.75
APOBEC3A-203ENST00000488758 TULP4Q9NRJ4 1543 aa10.35□□□□□ -0.75
APOBEC3A-203ENST00000488758 C14orf37Q86TY3 774 aa10.35□□□□□ -0.75
APOBEC3A-203ENST00000488758 XRN1Q8IZH2 1706 aaKnown RBP10.35□□□□□ -0.75
APOBEC3A-203ENST00000488758 CHADLQ6NUI6 762 aa10.34□□□□□ -0.75
APOBEC3A-203ENST00000488758 KNSTRNQ9Y448 316 aa10.34□□□□□ -0.75
APOBEC3A-203ENST00000488758 CNGB1Q14028 1251 aaPredicted RBP10.33□□□□□ -0.76
APOBEC3A-203ENST00000488758 NUDT16Q96DE0 195 aaKnown RBP10.33□□□□□ -0.76
APOBEC3A-203ENST00000488758 RBM33Q96EV2 1170 aaKnown RBP10.33□□□□□ -0.76
APOBEC3A-203ENST00000488758 NINLQ9Y2I6 1382 aa10.33□□□□□ -0.76
APOBEC3A-203ENST00000488758 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.33□□□□□ -0.76
APOBEC3A-203ENST00000488758 HDGFL2Q7Z4V5 671 aaPredicted RBP10.32□□□□□ -0.76
APOBEC3A-203ENST00000488758 TERF2IPQ9NYB0 399 aa10.32□□□□□ -0.76
APOBEC3A-203ENST00000488758 CABP1Q9NZU7 370 aa10.32□□□□□ -0.76
APOBEC3A-203ENST00000488758 CCDC61Q9Y6R9 512 aa10.32□□□□□ -0.76
APOBEC3A-203ENST00000488758 NUTM2FA1L443 756 aa10.31□□□□□ -0.76
APOBEC3A-203ENST00000488758 PER1O15534 1290 aaPredicted RBP10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms