RNA–Protein interactions for RNA: ENST00000488489.5

NECAB3-213, Transcript of N-terminal EF-hand calcium binding protein 3, humanhuman

TSL 2

Gene NECAB3, Length 2,142 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAB3-213ENST00000488489 BCANQ96GW7 911 aa27.43■■□□□ 1.98
NECAB3-213ENST00000488489 CABP2Q9NPB3 220 aa27.43■■□□□ 1.98
NECAB3-213ENST00000488489 DLC1Q96QB1 1528 aa27.43■■□□□ 1.98
NECAB3-213ENST00000488489 PNISRQ8TF01 805 aaKnown RBP27.43■■□□□ 1.98
NECAB3-213ENST00000488489 ARHGAP23Q9P227 1491 aa27.42■■□□□ 1.98
NECAB3-213ENST00000488489 WAPLQ7Z5K2 1190 aa27.42■■□□□ 1.98
NECAB3-213ENST00000488489 NLRP13Q86W25 1043 aa27.42■■□□□ 1.98
NECAB3-213ENST00000488489 SLIT1O75093 1534 aa27.42■■□□□ 1.98
NECAB3-213ENST00000488489 ADAMTS13Q76LX8 1427 aa27.42■■□□□ 1.98
NECAB3-213ENST00000488489 PLEKHG1Q9ULL1 1385 aa27.41■■□□□ 1.98
NECAB3-213ENST00000488489 PLEKHH1Q9ULM0 1364 aa27.4■■□□□ 1.98
NECAB3-213ENST00000488489 THEMISQ8N1K5 641 aaPredicted RBP27.39■■□□□ 1.98
NECAB3-213ENST00000488489 NPC1L1Q9UHC9 1359 aa27.38■■□□□ 1.97
NECAB3-213ENST00000488489 EID1Q9Y6B2 187 aa27.38■■□□□ 1.97
NECAB3-213ENST00000488489 SRPK2P78362 688 aaKnown RBP27.36■■□□□ 1.97
NECAB3-213ENST00000488489 CEP170BQ9Y4F5 1589 aaPredicted RBP27.34■■□□□ 1.97
NECAB3-213ENST00000488489 MED14O60244 1454 aa27.34■■□□□ 1.97
NECAB3-213ENST00000488489 TECPR2O15040 1411 aa27.33■■□□□ 1.97
NECAB3-213ENST00000488489 SLC26A8Q96RN1 970 aa27.32■■□□□ 1.96
NECAB3-213ENST00000488489 CDK19Q9BWU1 502 aa27.32■■□□□ 1.96
NECAB3-213ENST00000488489 NSD3Q9BZ95 1437 aa27.31■■□□□ 1.96
NECAB3-213ENST00000488489 KNDC1Q76NI1 1749 aa27.31■■□□□ 1.96
NECAB3-213ENST00000488489 PPP2R1AP30153 589 aa27.31■■□□□ 1.96
NECAB3-213ENST00000488489 SIRT1Q96EB6 747 aa27.29■■□□□ 1.96
NECAB3-213ENST00000488489 ANKRD36BQ8N2N9 1353 aa27.28■■□□□ 1.96
NECAB3-213ENST00000488489 FAM135BQ49AJ0 1406 aa27.28■■□□□ 1.96
NECAB3-213ENST00000488489 CPS1P31327 1500 aa27.28■■□□□ 1.96
NECAB3-213ENST00000488489 ATAD2Q6PL18 1390 aa27.28■■□□□ 1.96
NECAB3-213ENST00000488489 ROBO2Q9HCK4 1378 aa27.26■■□□□ 1.95
NECAB3-213ENST00000488489 SETD1BQ9UPS6 1966 aaKnown RBP27.26■■□□□ 1.95
NECAB3-213ENST00000488489 NINLQ9Y2I6 1382 aa27.26■■□□□ 1.95
NECAB3-213ENST00000488489 PTPRUQ92729 1446 aa27.25■■□□□ 1.95
NECAB3-213ENST00000488489 TBX22Q9Y458 520 aa27.24■■□□□ 1.95
NECAB3-213ENST00000488489 A0A1W2PP64 1363 aa27.23■■□□□ 1.95
NECAB3-213ENST00000488489 ZBED9Q6R2W3 1325 aa27.23■■□□□ 1.95
NECAB3-213ENST00000488489 CD163L1Q9NR16 1453 aa27.22■■□□□ 1.95
NECAB3-213ENST00000488489 ZNF142P52746 1687 aaPredicted RBP27.22■■□□□ 1.95
NECAB3-213ENST00000488489 USP32Q8NFA0 1604 aa27.21■■□□□ 1.95
NECAB3-213ENST00000488489 WASLO00401 505 aaPredicted RBP27.2■■□□□ 1.95
NECAB3-213ENST00000488489 CABP1Q9NZU7 370 aa27.2■■□□□ 1.94
NECAB3-213ENST00000488489 CGNL1Q0VF96 1302 aa27.19■■□□□ 1.94
NECAB3-213ENST00000488489 SENP3-EIF4A1A0A087X0R7 540 aa27.18■■□□□ 1.94
NECAB3-213ENST00000488489 AMOTL2Q9Y2J4 779 aa27.17■■□□□ 1.94
NECAB3-213ENST00000488489 DIP2AQ14689 1571 aa27.16■■□□□ 1.94
NECAB3-213ENST00000488489 TERF2IPQ9NYB0 399 aa27.16■■□□□ 1.94
NECAB3-213ENST00000488489 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.15■■□□□ 1.94
NECAB3-213ENST00000488489 MORC1Q86VD1 984 aa27.14■■□□□ 1.94
NECAB3-213ENST00000488489 ANKLE2Q86XL3 938 aa27.14■■□□□ 1.93
NECAB3-213ENST00000488489 TNNT2P45379 298 aaPredicted RBP27.1■■□□□ 1.93
NECAB3-213ENST00000488489 NUDT16Q96DE0 195 aaKnown RBP27.1■■□□□ 1.93
NECAB3-213ENST00000488489 NCKAP5LQ9HCH0 1330 aa27.1■■□□□ 1.93
NECAB3-213ENST00000488489 HDGFL2Q7Z4V5 671 aaPredicted RBP27.1■■□□□ 1.93
NECAB3-213ENST00000488489 NSD2O96028 1365 aa27.09■■□□□ 1.93
NECAB3-213ENST00000488489 ADAMTS8Q9UP79 889 aa27.09■■□□□ 1.93
NECAB3-213ENST00000488489 PTCH1Q13635 1447 aa27.08■■□□□ 1.93
NECAB3-213ENST00000488489 ADGRB2O60241 1585 aa27.07■■□□□ 1.92
NECAB3-213ENST00000488489 ATP7BP35670 1465 aa27.07■■□□□ 1.92
NECAB3-213ENST00000488489 PPIP5K1Q6PFW1 1433 aa27.07■■□□□ 1.92
NECAB3-213ENST00000488489 PRR36Q9H6K5 1346 aa27.07■■□□□ 1.92
NECAB3-213ENST00000488489 FYB1O15117 783 aa27.07■■□□□ 1.92
NECAB3-213ENST00000488489 XRN1Q8IZH2 1706 aaKnown RBP27.07■■□□□ 1.92
NECAB3-213ENST00000488489 INSRP06213 1382 aa27.06■■□□□ 1.92
NECAB3-213ENST00000488489 BLMP54132 1417 aaPredicted RBP27.06■■□□□ 1.92
NECAB3-213ENST00000488489 CCDC61Q9Y6R9 512 aa27.05■■□□□ 1.92
NECAB3-213ENST00000488489 GGNBP2Q9H3C7 697 aa27.05■■□□□ 1.92
NECAB3-213ENST00000488489 KCNA6P17658 529 aa27.04■■□□□ 1.92
NECAB3-213ENST00000488489 PIK3R4Q99570 1358 aa27.04■■□□□ 1.92
NECAB3-213ENST00000488489 CPSF1Q10570 1443 aaKnown RBP27.04■■□□□ 1.92
NECAB3-213ENST00000488489 WDR43Q15061 677 aaKnown RBP eCLIP27.02■■□□□ 1.92
NECAB3-213ENST00000488489 POLR3AO14802 1390 aaPredicted RBP27.02■■□□□ 1.92
NECAB3-213ENST00000488489 TSHZ2Q9NRE2 1034 aa27.01■■□□□ 1.91
NECAB3-213ENST00000488489 NUTM2FA1L443 756 aa26.99■■□□□ 1.91
NECAB3-213ENST00000488489 MTHFSP49914 203 aa26.99■■□□□ 1.91
NECAB3-213ENST00000488489 SALL2Q9Y467 1007 aaPredicted RBP26.99■■□□□ 1.91
NECAB3-213ENST00000488489 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.98■■□□□ 1.913e-6■□□□□ 9.1
NECAB3-213ENST00000488489 CDC42BPGQ6DT37 1551 aa26.98■■□□□ 1.91
NECAB3-213ENST00000488489 CHD2O14647 1828 aaKnown RBP26.97■■□□□ 1.91
NECAB3-213ENST00000488489 ANKRD26Q9UPS8 1709 aa26.97■■□□□ 1.91
NECAB3-213ENST00000488489 NPHP4O75161 1426 aaPredicted RBP26.95■■□□□ 1.91
NECAB3-213ENST00000488489 KIF20BQ96Q89 1820 aa26.95■■□□□ 1.9
NECAB3-213ENST00000488489 EDC4Q6P2E9 1401 aaKnown RBP26.94■■□□□ 1.9
NECAB3-213ENST00000488489 TOPAZ1Q8N9V7 1692 aa26.93■■□□□ 1.9
NECAB3-213ENST00000488489 SMG6Q86US8 1419 aaKnown RBP26.93■■□□□ 1.9
NECAB3-213ENST00000488489 AKAP12Q02952 1782 aa26.92■■□□□ 1.9
NECAB3-213ENST00000488489 MON2Q7Z3U7 1717 aa26.92■■□□□ 1.9
NECAB3-213ENST00000488489 SHPRHQ149N8 1683 aa26.91■■□□□ 1.9
NECAB3-213ENST00000488489 FKBP8Q14318 412 aa26.91■■□□□ 1.9
NECAB3-213ENST00000488489 PLEKHG3A1L390 1219 aa26.9■■□□□ 1.9
NECAB3-213ENST00000488489 NKTRP30414 1462 aaKnown RBP26.9■■□□□ 1.9
NECAB3-213ENST00000488489 ITSN1Q15811 1721 aa26.89■■□□□ 1.9
NECAB3-213ENST00000488489 ZNF692Q9BU19 519 aaPredicted RBP26.89■■□□□ 1.9
NECAB3-213ENST00000488489 NUDCQ9Y266 331 aa26.89■■□□□ 1.9
NECAB3-213ENST00000488489 ACEP12821 1306 aa26.89■■□□□ 1.89
NECAB3-213ENST00000488489 NME9Q86XW9 330 aa26.89■■□□□ 1.89
NECAB3-213ENST00000488489 CCDC146Q8IYE0 955 aa26.88■■□□□ 1.89
NECAB3-213ENST00000488489 RBM33Q96EV2 1170 aaKnown RBP26.87■■□□□ 1.89
NECAB3-213ENST00000488489 RGPD8O14715 1765 aaPredicted RBP26.86■■□□□ 1.89
NECAB3-213ENST00000488489 ZRANB1Q9UGI0 708 aa26.86■■□□□ 1.89
NECAB3-213ENST00000488489 CFAP53Q96M91 514 aa26.86■■□□□ 1.89
NECAB3-213ENST00000488489 FBLN1P23142 703 aa26.85■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms