RNA–Protein interactions for RNA: ENST00000488298.5

COL1A2-210, Transcript of collagen type I alpha 2 chain, humanhuman

TSL 2

Gene COL1A2, Length 594 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2-210ENST00000488298 PNPLA6Q8IY17 1366 aa17.81■□□□□ 0.44
COL1A2-210ENST00000488298 QTRT2Q9H974 415 aaKnown RBP17.81■□□□□ 0.44
COL1A2-210ENST00000488298 RNF216Q9NWF9 866 aaPredicted RBP17.81■□□□□ 0.44
COL1A2-210ENST00000488298 NHSL1Q5SYE7 1610 aa17.8■□□□□ 0.44
COL1A2-210ENST00000488298 C1orf167Q5SNV9 1468 aa17.8■□□□□ 0.44
COL1A2-210ENST00000488298 ORAI2Q96SN7 254 aa17.79■□□□□ 0.44
COL1A2-210ENST00000488298 CDK12Q9NYV4 1490 aaPredicted RBP17.79■□□□□ 0.44
COL1A2-210ENST00000488298 ROBO2Q9HCK4 1378 aa17.79■□□□□ 0.44
COL1A2-210ENST00000488298 ADAMTS2O95450 1211 aa17.78■□□□□ 0.44
COL1A2-210ENST00000488298 RBM6P78332 1123 aaKnown RBP17.78■□□□□ 0.44
COL1A2-210ENST00000488298 NGLY1Q96IV0 654 aa17.78■□□□□ 0.44
COL1A2-210ENST00000488298 PTCH1Q13635 1447 aa17.78■□□□□ 0.44
COL1A2-210ENST00000488298 HOXD11P31277 338 aaPredicted RBP17.77■□□□□ 0.44
COL1A2-210ENST00000488298 NRXN1Q9ULB1 1477 aa17.76■□□□□ 0.43
COL1A2-210ENST00000488298 SOS2Q07890 1332 aaPredicted RBP17.76■□□□□ 0.43
COL1A2-210ENST00000488298 NALCNQ8IZF0 1738 aa17.76■□□□□ 0.43
COL1A2-210ENST00000488298 ADGRF5Q8IZF2 1346 aa17.74■□□□□ 0.43
COL1A2-210ENST00000488298 PRAG1Q86YV5 1406 aa17.74■□□□□ 0.43
COL1A2-210ENST00000488298 TRIM26Q12899 539 aaPredicted RBP17.74■□□□□ 0.43
COL1A2-210ENST00000488298 MYOM2P54296 1465 aa17.74■□□□□ 0.43
COL1A2-210ENST00000488298 PIK3C2GO75747 1445 aa17.72■□□□□ 0.43
COL1A2-210ENST00000488298 RGL3Q3MIN7 710 aa17.72■□□□□ 0.43
COL1A2-210ENST00000488298 ESCO1Q5FWF5 840 aa17.71■□□□□ 0.43
COL1A2-210ENST00000488298 USP21Q9UK80 565 aa17.71■□□□□ 0.43
COL1A2-210ENST00000488298 DHX57Q6P158 1386 aaKnown RBP17.7■□□□□ 0.42
COL1A2-210ENST00000488298 RGS12O14924 1447 aa17.7■□□□□ 0.42
COL1A2-210ENST00000488298 TRPC5Q9UL62 973 aaPredicted RBP17.69■□□□□ 0.42
COL1A2-210ENST00000488298 NPHP3Q7Z494 1330 aa17.69■□□□□ 0.42
COL1A2-210ENST00000488298 FNBP4Q8N3X1 1017 aaPredicted RBP17.68■□□□□ 0.42
COL1A2-210ENST00000488298 STK26Q9P289 416 aa17.68■□□□□ 0.42
COL1A2-210ENST00000488298 LAMC1P11047 1609 aa17.68■□□□□ 0.42
COL1A2-210ENST00000488298 FOXO3O43524 673 aa17.67■□□□□ 0.42
COL1A2-210ENST00000488298 KNDC1Q76NI1 1749 aa17.67■□□□□ 0.42
COL1A2-210ENST00000488298 WAPLQ7Z5K2 1190 aa17.66■□□□□ 0.42
COL1A2-210ENST00000488298 NUTM2FA1L443 756 aa17.65■□□□□ 0.42
COL1A2-210ENST00000488298 TECPR2O15040 1411 aa17.64■□□□□ 0.42
COL1A2-210ENST00000488298 XPCQ01831 940 aaPredicted RBP17.64■□□□□ 0.41
COL1A2-210ENST00000488298 TMEM132EQ6IEE7 984 aa17.64■□□□□ 0.41
COL1A2-210ENST00000488298 C14orf93Q9H972 538 aaKnown RBP17.63■□□□□ 0.41
COL1A2-210ENST00000488298 LRPPRCP42704 1394 aaKnown RBP17.63■□□□□ 0.41
COL1A2-210ENST00000488298 ADGRB1O14514 1584 aa17.62■□□□□ 0.41
COL1A2-210ENST00000488298 ATAD2Q6PL18 1390 aa17.62■□□□□ 0.41
COL1A2-210ENST00000488298 ABCC11Q96J66 1382 aa17.62■□□□□ 0.41
COL1A2-210ENST00000488298 CDC42BPGQ6DT37 1551 aa17.61■□□□□ 0.41
COL1A2-210ENST00000488298 ATRNO75882 1429 aa17.6■□□□□ 0.41
COL1A2-210ENST00000488298 PXDNQ92626 1479 aa17.59■□□□□ 0.41
COL1A2-210ENST00000488298 STAC3Q96MF2 364 aa17.59■□□□□ 0.41
COL1A2-210ENST00000488298 COL22A1Q8NFW1 1626 aaPredicted RBP17.58■□□□□ 0.41
COL1A2-210ENST00000488298 PLEKHH1Q9ULM0 1364 aa17.58■□□□□ 0.4
COL1A2-210ENST00000488298 CFAP70Q5T0N1 1121 aa17.58■□□□□ 0.4
COL1A2-210ENST00000488298 DCAF11Q8TEB1 546 aa17.58■□□□□ 0.4
COL1A2-210ENST00000488298 KIAA1210Q9ULL0 1709 aa17.58■□□□□ 0.4
COL1A2-210ENST00000488298 YTHDC2Q9H6S0 1430 aaKnown RBP17.57■□□□□ 0.4
COL1A2-210ENST00000488298 GJD4Q96KN9 370 aaPredicted RBP17.57■□□□□ 0.4
COL1A2-210ENST00000488298 BCL9LQ86UU0 1499 aa17.56■□□□□ 0.4
COL1A2-210ENST00000488298 SIRT1Q96EB6 747 aa17.56■□□□□ 0.4
COL1A2-210ENST00000488298 SPATA31A3Q5VYP0 1347 aa17.55■□□□□ 0.4
COL1A2-210ENST00000488298 KRT28Q7Z3Y7 464 aa17.55■□□□□ 0.4
COL1A2-210ENST00000488298 SIN3AQ96ST3 1273 aa17.55■□□□□ 0.4
COL1A2-210ENST00000488298 DLC1Q96QB1 1528 aa17.54■□□□□ 0.4
COL1A2-210ENST00000488298 CCDC125Q86Z20 511 aa17.53■□□□□ 0.4
COL1A2-210ENST00000488298 UNC5CLQ8IV45 518 aa17.53■□□□□ 0.4
COL1A2-210ENST00000488298 KDM2AQ9Y2K7 1162 aa17.53■□□□□ 0.4
COL1A2-210ENST00000488298 PSME1Q06323 249 aa17.52■□□□□ 0.4
COL1A2-210ENST00000488298 PHF8Q9UPP1 1060 aa17.52■□□□□ 0.4
COL1A2-210ENST00000488298 HAP1P54257 671 aaPredicted RBP17.51■□□□□ 0.39
COL1A2-210ENST00000488298 ZRANB1Q9UGI0 708 aa17.51■□□□□ 0.39
COL1A2-210ENST00000488298 ARHGEF28Q8N1W1 1705 aaKnown RBP17.5■□□□□ 0.39
COL1A2-210ENST00000488298 L3MBTL2Q969R5 705 aa17.5■□□□□ 0.39
COL1A2-210ENST00000488298 SAFB2Q14151 953 aaKnown RBP eCLIP17.49■□□□□ 0.39
COL1A2-210ENST00000488298 FMN2Q9NZ56 1722 aa17.48■□□□□ 0.39
COL1A2-210ENST00000488298 PRAM1Q96QH2 718 aa17.48■□□□□ 0.39
COL1A2-210ENST00000488298 SLIT2O94813 1529 aa17.47■□□□□ 0.39
COL1A2-210ENST00000488298 TRPM1Q7Z4N2 1603 aa17.47■□□□□ 0.39
COL1A2-210ENST00000488298 MARF1Q9Y4F3 1742 aaKnown RBP17.47■□□□□ 0.39
COL1A2-210ENST00000488298 PLEKHG5O94827 1062 aa17.47■□□□□ 0.39
COL1A2-210ENST00000488298 LMOD2Q6P5Q4 547 aa17.47■□□□□ 0.39
COL1A2-210ENST00000488298 CABLES1Q8TDN4 633 aa17.47■□□□□ 0.39
COL1A2-210ENST00000488298 POGKQ9P215 609 aa17.47■□□□□ 0.39
COL1A2-210ENST00000488298 KIF1AQ12756 1690 aa17.46■□□□□ 0.39
COL1A2-210ENST00000488298 ADGRB2O60241 1585 aa17.45■□□□□ 0.38
COL1A2-210ENST00000488298 RALGAPBQ86X10 1494 aa17.45■□□□□ 0.38
COL1A2-210ENST00000488298 RGPD8O14715 1765 aaPredicted RBP17.45■□□□□ 0.38
COL1A2-210ENST00000488298 TNS3Q68CZ2 1445 aa17.45■□□□□ 0.38
COL1A2-210ENST00000488298 SBNO1A3KN83 1393 aa17.44■□□□□ 0.38
COL1A2-210ENST00000488298 VPS72Q15906 364 aa17.44■□□□□ 0.38
COL1A2-210ENST00000488298 PMFBP1Q8TBY8 1022 aa17.44■□□□□ 0.38
COL1A2-210ENST00000488298 NBPF1Q3BBV0 1214 aa17.43■□□□□ 0.38
COL1A2-210ENST00000488298 SEPT12Q8IYM1 358 aa17.43■□□□□ 0.38
COL1A2-210ENST00000488298 CCDC9Q9Y3X0 531 aaKnown RBP17.43■□□□□ 0.38
COL1A2-210ENST00000488298 DCAF8L1A6NGE4 600 aa17.42■□□□□ 0.38
COL1A2-210ENST00000488298 NEUROD1Q13562 356 aa17.42■□□□□ 0.38
COL1A2-210ENST00000488298 PCGF6Q9BYE7 350 aa17.42■□□□□ 0.38
COL1A2-210ENST00000488298 USP32Q8NFA0 1604 aa17.42■□□□□ 0.38
COL1A2-210ENST00000488298 ARHGEF10O15013 1369 aa17.41■□□□□ 0.38
COL1A2-210ENST00000488298 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.41■□□□□ 0.38
COL1A2-210ENST00000488298 GLI3P10071 1580 aa17.41■□□□□ 0.38
COL1A2-210ENST00000488298 TRAK1Q9UPV9 953 aa17.41■□□□□ 0.38
COL1A2-210ENST00000488298 BLMP54132 1417 aaPredicted RBP17.4■□□□□ 0.38
COL1A2-210ENST00000488298 SF3B2Q13435 895 aaKnown RBP17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms