RNA–Protein interactions for RNA: ENST00000488250.5

RAPGEF3-211, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2

Gene RAPGEF3, Length 1,947 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-211ENST00000488250 SENP3-EIF4A1A0A087X0R7 540 aa21.29■■□□□ 1
RAPGEF3-211ENST00000488250 POLR3AO14802 1390 aaPredicted RBP21.29■■□□□ 1
RAPGEF3-211ENST00000488250 NSD2O96028 1365 aa21.29■■□□□ 1
RAPGEF3-211ENST00000488250 TSHZ2Q9NRE2 1034 aa21.28■■□□□ 1
RAPGEF3-211ENST00000488250 STK26Q9P289 416 aa21.28■■□□□ 1
RAPGEF3-211ENST00000488250 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.27■■□□□ 1
RAPGEF3-211ENST00000488250 ATAD2Q6PL18 1390 aa21.27■■□□□ 1
RAPGEF3-211ENST00000488250 CGNL1Q0VF96 1302 aa21.27■■□□□ 1
RAPGEF3-211ENST00000488250 PRAM1Q96QH2 718 aa21.26■□□□□ 0.99
RAPGEF3-211ENST00000488250 TNRQ92752 1358 aa21.25■□□□□ 0.99
RAPGEF3-211ENST00000488250 MORC1Q86VD1 984 aa21.25■□□□□ 0.99
RAPGEF3-211ENST00000488250 CABP2Q9NPB3 220 aa21.25■□□□□ 0.99
RAPGEF3-211ENST00000488250 NRXN3Q9Y4C0 1643 aa21.24■□□□□ 0.99
RAPGEF3-211ENST00000488250 POGKQ9P215 609 aa21.24■□□□□ 0.99
RAPGEF3-211ENST00000488250 ABCC11Q96J66 1382 aa21.24■□□□□ 0.99
RAPGEF3-211ENST00000488250 SALL2Q9Y467 1007 aaPredicted RBP21.23■□□□□ 0.99
RAPGEF3-211ENST00000488250 ZNF521Q96K83 1311 aa21.23■□□□□ 0.99
RAPGEF3-211ENST00000488250 RCAN3Q9UKA8 241 aa21.22■□□□□ 0.99
RAPGEF3-211ENST00000488250 HDGFP51858 240 aaKnown RBP21.21■□□□□ 0.99
RAPGEF3-211ENST00000488250 SAFB2Q14151 953 aaKnown RBP eCLIP21.21■□□□□ 0.99
RAPGEF3-211ENST00000488250 NGEFQ8N5V2 710 aa21.21■□□□□ 0.99
RAPGEF3-211ENST00000488250 CDCA7LQ96GN5 454 aa21.21■□□□□ 0.99
RAPGEF3-211ENST00000488250 SRPK2P78362 688 aaKnown RBP21.2■□□□□ 0.98
RAPGEF3-211ENST00000488250 PLEKHH1Q9ULM0 1364 aa21.2■□□□□ 0.98
RAPGEF3-211ENST00000488250 A0A1W2PP64 1363 aa21.19■□□□□ 0.98
RAPGEF3-211ENST00000488250 UBR1Q8IWV7 1749 aa21.19■□□□□ 0.98
RAPGEF3-211ENST00000488250 MINK1Q8N4C8 1332 aaPredicted RBP21.19■□□□□ 0.98
RAPGEF3-211ENST00000488250 RRP1P56182 461 aaKnown RBP21.18■□□□□ 0.98
RAPGEF3-211ENST00000488250 CD163L1Q9NR16 1453 aa21.18■□□□□ 0.98
RAPGEF3-211ENST00000488250 SHPRHQ149N8 1683 aa21.18■□□□□ 0.98
RAPGEF3-211ENST00000488250 MED14O60244 1454 aa21.17■□□□□ 0.98
RAPGEF3-211ENST00000488250 TERF2IPQ9NYB0 399 aa21.17■□□□□ 0.98
RAPGEF3-211ENST00000488250 NLRP1Q9C000 1473 aa21.17■□□□□ 0.98
RAPGEF3-211ENST00000488250 TMEM2Q9UHN6 1383 aa21.16■□□□□ 0.98
RAPGEF3-211ENST00000488250 KNDC1Q76NI1 1749 aa21.16■□□□□ 0.98
RAPGEF3-211ENST00000488250 SIRT1Q96EB6 747 aa21.16■□□□□ 0.98
RAPGEF3-211ENST00000488250 SENP3Q9H4L4 574 aaPredicted RBP21.16■□□□□ 0.98
RAPGEF3-211ENST00000488250 TECPR2O15040 1411 aa21.16■□□□□ 0.98
RAPGEF3-211ENST00000488250 CDK19Q9BWU1 502 aa21.15■□□□□ 0.98
RAPGEF3-211ENST00000488250 FAM135BQ49AJ0 1406 aa21.14■□□□□ 0.97
RAPGEF3-211ENST00000488250 ANKRD26Q9UPS8 1709 aa21.13■□□□□ 0.97
RAPGEF3-211ENST00000488250 GOLGA2Q08379 1002 aa21.13■□□□□ 0.97
RAPGEF3-211ENST00000488250 METP08581 1390 aa21.13■□□□□ 0.97
RAPGEF3-211ENST00000488250 B4GALNT3Q6L9W6 998 aa21.12■□□□□ 0.97
RAPGEF3-211ENST00000488250 CPS1P31327 1500 aa21.11■□□□□ 0.97
RAPGEF3-211ENST00000488250 ATP7BP35670 1465 aa21.11■□□□□ 0.97
RAPGEF3-211ENST00000488250 DUSP27Q5VZP5 1158 aa21.11■□□□□ 0.97
RAPGEF3-211ENST00000488250 CFAP53Q96M91 514 aa21.11■□□□□ 0.97
RAPGEF3-211ENST00000488250 MTHFSP49914 203 aa21.1■□□□□ 0.97
RAPGEF3-211ENST00000488250 TRMT2AQ8IZ69 625 aaKnown RBP21.1■□□□□ 0.97
RAPGEF3-211ENST00000488250 APAF1O14727 1248 aa21.1■□□□□ 0.97
RAPGEF3-211ENST00000488250 HDGFL2Q7Z4V5 671 aaPredicted RBP21.1■□□□□ 0.97
RAPGEF3-211ENST00000488250 WAPLQ7Z5K2 1190 aa21.1■□□□□ 0.97
RAPGEF3-211ENST00000488250 CCDC146Q8IYE0 955 aa21.1■□□□□ 0.97
RAPGEF3-211ENST00000488250 SLFN5Q08AF3 891 aa21.09■□□□□ 0.97
RAPGEF3-211ENST00000488250 TNNT2P45379 298 aaPredicted RBP21.08■□□□□ 0.96
RAPGEF3-211ENST00000488250 PLEKHG1Q9ULL1 1385 aa21.07■□□□□ 0.96
RAPGEF3-211ENST00000488250 C3P01024 1663 aa21.07■□□□□ 0.96
RAPGEF3-211ENST00000488250 ADAMTS13Q76LX8 1427 aa21.07■□□□□ 0.96
RAPGEF3-211ENST00000488250 FYB1O15117 783 aa21.06■□□□□ 0.96
RAPGEF3-211ENST00000488250 NCBP3Q53F19 620 aaKnown RBP21.06■□□□□ 0.96
RAPGEF3-211ENST00000488250 CABP1Q9NZU7 370 aa21.06■□□□□ 0.96
RAPGEF3-211ENST00000488250 IQSEC2Q5JU85 1478 aa21.05■□□□□ 0.96
RAPGEF3-211ENST00000488250 RUNDC1Q96C34 613 aa21.05■□□□□ 0.96
RAPGEF3-211ENST00000488250 WASLO00401 505 aaPredicted RBP21.04■□□□□ 0.96
RAPGEF3-211ENST00000488250 SLIT1O75093 1534 aa21.04■□□□□ 0.96
RAPGEF3-211ENST00000488250 CCDC136Q96JN2 1154 aa21.04■□□□□ 0.96
RAPGEF3-211ENST00000488250 KIF20BQ96Q89 1820 aa21.04■□□□□ 0.96
RAPGEF3-211ENST00000488250 ARHGAP23Q9P227 1491 aa21.03■□□□□ 0.96
RAPGEF3-211ENST00000488250 FER1L4A9Z1Z3 1794 aa21.03■□□□□ 0.96
RAPGEF3-211ENST00000488250 E9PSI1 815 aa21.03■□□□□ 0.96
RAPGEF3-211ENST00000488250 COL3A1P02461 1466 aaPredicted RBP21.02■□□□□ 0.96
RAPGEF3-211ENST00000488250 GGNBP2Q9H3C7 697 aa21.02■□□□□ 0.95
RAPGEF3-211ENST00000488250 CPSF1Q10570 1443 aaKnown RBP21.01■□□□□ 0.95
RAPGEF3-211ENST00000488250 PHF23Q9BUL5 403 aaPredicted RBP21.01■□□□□ 0.95
RAPGEF3-211ENST00000488250 NKTRP30414 1462 aaKnown RBP21.01■□□□□ 0.95
RAPGEF3-211ENST00000488250 TXNDC2Q86VQ3 553 aa21■□□□□ 0.95
RAPGEF3-211ENST00000488250 ADGRB2O60241 1585 aa21■□□□□ 0.95
RAPGEF3-211ENST00000488250 LTKP29376 864 aa21■□□□□ 0.95
RAPGEF3-211ENST00000488250 CEBPAP49715 358 aaPredicted RBP20.99■□□□□ 0.95
RAPGEF3-211ENST00000488250 WWC1Q8IX03 1113 aa20.99■□□□□ 0.95
RAPGEF3-211ENST00000488250 EXOC6Q8TAG9 804 aa20.99■□□□□ 0.95
RAPGEF3-211ENST00000488250 CCDC27Q2M243 656 aa20.98■□□□□ 0.95
RAPGEF3-211ENST00000488250 PNPLA6Q8IY17 1366 aa20.98■□□□□ 0.95
RAPGEF3-211ENST00000488250 EDC4Q6P2E9 1401 aaKnown RBP20.98■□□□□ 0.95
RAPGEF3-211ENST00000488250 PPIP5K1Q6PFW1 1433 aa20.98■□□□□ 0.95
RAPGEF3-211ENST00000488250 CDC42BPGQ6DT37 1551 aa20.98■□□□□ 0.95
RAPGEF3-211ENST00000488250 SPINK5Q9NQ38 1064 aaPredicted RBP20.97■□□□□ 0.95
RAPGEF3-211ENST00000488250 RBM19Q9Y4C8 960 aaKnown RBP20.97■□□□□ 0.95
RAPGEF3-211ENST00000488250 EID1Q9Y6B2 187 aa20.96■□□□□ 0.95
RAPGEF3-211ENST00000488250 ROBO2Q9HCK4 1378 aa20.96■□□□□ 0.95
RAPGEF3-211ENST00000488250 TCP11L2Q8N4U5 519 aa20.96■□□□□ 0.95
RAPGEF3-211ENST00000488250 CCDC61Q9Y6R9 512 aa20.95■□□□□ 0.94
RAPGEF3-211ENST00000488250 WDR63Q8IWG1 891 aa20.94■□□□□ 0.94
RAPGEF3-211ENST00000488250 NUDT16Q96DE0 195 aaKnown RBP20.94■□□□□ 0.94
RAPGEF3-211ENST00000488250 MON2Q7Z3U7 1717 aa20.94■□□□□ 0.94
RAPGEF3-211ENST00000488250 U2AF1L5P0DN76 240 aaPredicted RBP20.93■□□□□ 0.94
RAPGEF3-211ENST00000488250 U2AF1Q01081 240 aaKnown RBP eCLIP20.93■□□□□ 0.94
RAPGEF3-211ENST00000488250 DMRT2Q9Y5R5 561 aa20.93■□□□□ 0.94
RAPGEF3-211ENST00000488250 DIP2AQ14689 1571 aa20.93■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms