RNA–Protein interactions for RNA: ENST00000488235.1

PCYT1A-215, Transcript of phosphate cytidylyltransferase 1, choline, alpha, humanhuman

TSL 3

Gene PCYT1A, Length 466 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCYT1A-215ENST00000488235 LAMC1P11047 1609 aa16.67■□□□□ 0.26
PCYT1A-215ENST00000488235 SOS2Q07890 1332 aaPredicted RBP16.67■□□□□ 0.26
PCYT1A-215ENST00000488235 ABCC11Q96J66 1382 aa16.66■□□□□ 0.26
PCYT1A-215ENST00000488235 CDC42BPGQ6DT37 1551 aa16.66■□□□□ 0.26
PCYT1A-215ENST00000488235 NRXN1Q9ULB1 1477 aa16.66■□□□□ 0.26
PCYT1A-215ENST00000488235 NUTM2FA1L443 756 aa16.65■□□□□ 0.26
PCYT1A-215ENST00000488235 YTHDC2Q9H6S0 1430 aaKnown RBP16.64■□□□□ 0.25
PCYT1A-215ENST00000488235 CFAP70Q5T0N1 1121 aa16.64■□□□□ 0.25
PCYT1A-215ENST00000488235 ZNF772Q68DY9 489 aaPredicted RBP16.64■□□□□ 0.25
PCYT1A-215ENST00000488235 C14orf93Q9H972 538 aaKnown RBP16.64■□□□□ 0.25
PCYT1A-215ENST00000488235 AFF2P51816 1311 aa16.64■□□□□ 0.25
PCYT1A-215ENST00000488235 KNDC1Q76NI1 1749 aa16.62■□□□□ 0.25
PCYT1A-215ENST00000488235 MYOM2P54296 1465 aa16.62■□□□□ 0.25
PCYT1A-215ENST00000488235 XPCQ01831 940 aaPredicted RBP16.62■□□□□ 0.25
PCYT1A-215ENST00000488235 ESCO1Q5FWF5 840 aa16.62■□□□□ 0.25
PCYT1A-215ENST00000488235 C8orf37Q96NL8 207 aa16.62■□□□□ 0.25
PCYT1A-215ENST00000488235 ADAMTS2O95450 1211 aa16.61■□□□□ 0.25
PCYT1A-215ENST00000488235 PXDNQ92626 1479 aa16.61■□□□□ 0.25
PCYT1A-215ENST00000488235 FOXO3O43524 673 aa16.59■□□□□ 0.25
PCYT1A-215ENST00000488235 ACIN1Q9UKV3 1341 aaKnown RBP16.59■□□□□ 0.25
PCYT1A-215ENST00000488235 EP400Q96L91 3159 aa16.58■□□□□ 0.24
PCYT1A-215ENST00000488235 SRCAPQ6ZRS2 3230 aa16.58■□□□□ 0.24
PCYT1A-215ENST00000488235 NPHP3Q7Z494 1330 aa16.57■□□□□ 0.24
PCYT1A-215ENST00000488235 RXRBP28702 533 aa16.57■□□□□ 0.24
PCYT1A-215ENST00000488235 FMN2Q9NZ56 1722 aa16.56■□□□□ 0.24
PCYT1A-215ENST00000488235 SAFB2Q14151 953 aaKnown RBP eCLIP16.56■□□□□ 0.24
PCYT1A-215ENST00000488235 PRAM1Q96QH2 718 aa16.56■□□□□ 0.24
PCYT1A-215ENST00000488235 ADGRB1O14514 1584 aa16.55■□□□□ 0.24
PCYT1A-215ENST00000488235 SIRT1Q96EB6 747 aa16.55■□□□□ 0.24
PCYT1A-215ENST00000488235 COL22A1Q8NFW1 1626 aaPredicted RBP16.55■□□□□ 0.24
PCYT1A-215ENST00000488235 DHX57Q6P158 1386 aaKnown RBP16.54■□□□□ 0.24
PCYT1A-215ENST00000488235 NGLY1Q96IV0 654 aa16.54■□□□□ 0.24
PCYT1A-215ENST00000488235 QTRT2Q9H974 415 aaKnown RBP16.54■□□□□ 0.24
PCYT1A-215ENST00000488235 KDM2AQ9Y2K7 1162 aa16.54■□□□□ 0.24
PCYT1A-215ENST00000488235 RGS12O14924 1447 aa16.53■□□□□ 0.24
PCYT1A-215ENST00000488235 UPF1Q92900 1129 aaKnown RBP eCLIP16.53■□□□□ 0.24
PCYT1A-215ENST00000488235 HRCP23327 699 aa16.52■□□□□ 0.24
PCYT1A-215ENST00000488235 DCAF11Q8TEB1 546 aa16.52■□□□□ 0.24
PCYT1A-215ENST00000488235 CDK12Q9NYV4 1490 aaPredicted RBP16.52■□□□□ 0.23
PCYT1A-215ENST00000488235 FNBP4Q8N3X1 1017 aaPredicted RBP16.51■□□□□ 0.23
PCYT1A-215ENST00000488235 TRAK1Q9UPV9 953 aa16.51■□□□□ 0.23
PCYT1A-215ENST00000488235 RGPD8O14715 1765 aaPredicted RBP16.51■□□□□ 0.23
PCYT1A-215ENST00000488235 DLC1Q96QB1 1528 aa16.5■□□□□ 0.23
PCYT1A-215ENST00000488235 SPATA31A3Q5VYP0 1347 aa16.49■□□□□ 0.23
PCYT1A-215ENST00000488235 RBM6P78332 1123 aaKnown RBP16.49■□□□□ 0.23
PCYT1A-215ENST00000488235 HIRIP3Q9BW71 556 aaPredicted RBP16.49■□□□□ 0.23
PCYT1A-215ENST00000488235 USP21Q9UK80 565 aa16.49■□□□□ 0.23
PCYT1A-215ENST00000488235 USP32Q8NFA0 1604 aa16.48■□□□□ 0.23
PCYT1A-215ENST00000488235 KRT28Q7Z3Y7 464 aa16.48■□□□□ 0.23
PCYT1A-215ENST00000488235 POGKQ9P215 609 aa16.48■□□□□ 0.23
PCYT1A-215ENST00000488235 PHF8Q9UPP1 1060 aa16.48■□□□□ 0.23
PCYT1A-215ENST00000488235 BCL9LQ86UU0 1499 aa16.48■□□□□ 0.23
PCYT1A-215ENST00000488235 KIF1AQ12756 1690 aa16.47■□□□□ 0.23
PCYT1A-215ENST00000488235 ATRNO75882 1429 aa16.46■□□□□ 0.23
PCYT1A-215ENST00000488235 ADGRB2O60241 1585 aa16.46■□□□□ 0.23
PCYT1A-215ENST00000488235 MINK1Q8N4C8 1332 aaPredicted RBP16.45■□□□□ 0.22
PCYT1A-215ENST00000488235 PRR36Q9H6K5 1346 aa16.45■□□□□ 0.22
PCYT1A-215ENST00000488235 PMFBP1Q8TBY8 1022 aa16.45■□□□□ 0.22
PCYT1A-215ENST00000488235 CABLES1Q8TDN4 633 aa16.44■□□□□ 0.22
PCYT1A-215ENST00000488235 TNS3Q68CZ2 1445 aa16.44■□□□□ 0.22
PCYT1A-215ENST00000488235 PLEKHG5O94827 1062 aa16.43■□□□□ 0.22
PCYT1A-215ENST00000488235 TRPC5Q9UL62 973 aaPredicted RBP16.43■□□□□ 0.22
PCYT1A-215ENST00000488235 ANKARQ7Z5J8 1434 aa16.43■□□□□ 0.22
PCYT1A-215ENST00000488235 MARF1Q9Y4F3 1742 aaKnown RBP16.42■□□□□ 0.22
PCYT1A-215ENST00000488235 SLIT2O94813 1529 aa16.4■□□□□ 0.22
PCYT1A-215ENST00000488235 SBNO1A3KN83 1393 aa16.4■□□□□ 0.22
PCYT1A-215ENST00000488235 WASLO00401 505 aaPredicted RBP16.4■□□□□ 0.22
PCYT1A-215ENST00000488235 PSME1Q06323 249 aa16.39■□□□□ 0.21
PCYT1A-215ENST00000488235 NBPF1Q3BBV0 1214 aa16.39■□□□□ 0.21
PCYT1A-215ENST00000488235 STAC3Q96MF2 364 aa16.39■□□□□ 0.21
PCYT1A-215ENST00000488235 TULP4Q9NRJ4 1543 aa16.39■□□□□ 0.21
PCYT1A-215ENST00000488235 ARHGEF28Q8N1W1 1705 aaKnown RBP16.39■□□□□ 0.21
PCYT1A-215ENST00000488235 LMOD2Q6P5Q4 547 aa16.38■□□□□ 0.21
PCYT1A-215ENST00000488235 ABCA3Q99758 1704 aa16.37■□□□□ 0.21
PCYT1A-215ENST00000488235 TRPM3Q9HCF6 1732 aaPredicted RBP16.37■□□□□ 0.21
PCYT1A-215ENST00000488235 UNC5CLQ8IV45 518 aa16.37■□□□□ 0.21
PCYT1A-215ENST00000488235 GJD4Q96KN9 370 aaPredicted RBP16.37■□□□□ 0.21
PCYT1A-215ENST00000488235 GLI3P10071 1580 aa16.36■□□□□ 0.21
PCYT1A-215ENST00000488235 ATP7BP35670 1465 aa16.35■□□□□ 0.21
PCYT1A-215ENST00000488235 RALGAPBQ86X10 1494 aa16.35■□□□□ 0.21
PCYT1A-215ENST00000488235 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.34■□□□□ 0.21
PCYT1A-215ENST00000488235 ARHGEF10O15013 1369 aa16.34■□□□□ 0.21
PCYT1A-215ENST00000488235 ALS2Q96Q42 1657 aa16.34■□□□□ 0.21
PCYT1A-215ENST00000488235 FAM83GA6ND36 823 aa16.33■□□□□ 0.2
PCYT1A-215ENST00000488235 HAP1P54257 671 aaPredicted RBP16.33■□□□□ 0.2
PCYT1A-215ENST00000488235 ATAD2Q6PL18 1390 aa16.33■□□□□ 0.2
PCYT1A-215ENST00000488235 EIF3AQ14152 1382 aaKnown RBP16.32■□□□□ 0.2
PCYT1A-215ENST00000488235 NUDT16Q96DE0 195 aaKnown RBP16.32■□□□□ 0.2
PCYT1A-215ENST00000488235 SIN3AQ96ST3 1273 aa16.32■□□□□ 0.2
PCYT1A-215ENST00000488235 CDK19Q9BWU1 502 aa16.32■□□□□ 0.2
PCYT1A-215ENST00000488235 PLCH1Q4KWH8 1693 aa16.31■□□□□ 0.2
PCYT1A-215ENST00000488235 NGDNQ8NEJ9 315 aaKnown RBP16.31■□□□□ 0.2
PCYT1A-215ENST00000488235 KIAA1210Q9ULL0 1709 aa16.31■□□□□ 0.2
PCYT1A-215ENST00000488235 GPRASP1Q5JY77 1395 aa16.3■□□□□ 0.2
PCYT1A-215ENST00000488235 VPS72Q15906 364 aa16.29■□□□□ 0.2
PCYT1A-215ENST00000488235 L3MBTL2Q969R5 705 aa16.29■□□□□ 0.2
PCYT1A-215ENST00000488235 CRYBG1Q9Y4K1 1723 aa16.28■□□□□ 0.2
PCYT1A-215ENST00000488235 PAK3O75914 559 aaPredicted RBP16.28■□□□□ 0.2
PCYT1A-215ENST00000488235 NRAPQ86VF7 1730 aa16.27■□□□□ 0.19
PCYT1A-215ENST00000488235 NWD2Q9ULI1 1742 aa16.27■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms