RNA–Protein interactions for RNA: ENST00000488203.1

CIT-205, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 2

Gene CIT, Length 2,283 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-205ENST00000488203 ARHGEF28Q8N1W1 1705 aaKnown RBP12.86□□□□□ -0.35
CIT-205ENST00000488203 TULP4Q9NRJ4 1543 aa12.86□□□□□ -0.35
CIT-205ENST00000488203 NPC1L1Q9UHC9 1359 aa12.86□□□□□ -0.35
CIT-205ENST00000488203 YTHDC2Q9H6S0 1430 aaKnown RBP12.85□□□□□ -0.35
CIT-205ENST00000488203 CEBPAP49715 358 aaPredicted RBP12.85□□□□□ -0.35
CIT-205ENST00000488203 SRPK2P78362 688 aaKnown RBP12.85□□□□□ -0.35
CIT-205ENST00000488203 WDR43Q15061 677 aaKnown RBP eCLIP12.85□□□□□ -0.35
CIT-205ENST00000488203 CDCA7LQ96GN5 454 aa12.85□□□□□ -0.35
CIT-205ENST00000488203 ALKQ9UM73 1620 aa12.84□□□□□ -0.35
CIT-205ENST00000488203 WAPLQ7Z5K2 1190 aa12.83□□□□□ -0.35
CIT-205ENST00000488203 PTPRMP28827 1452 aa12.83□□□□□ -0.36
CIT-205ENST00000488203 BLMP54132 1417 aaPredicted RBP12.83□□□□□ -0.36
CIT-205ENST00000488203 MORC1Q86VD1 984 aa12.83□□□□□ -0.36
CIT-205ENST00000488203 CCDC146Q8IYE0 955 aa12.82□□□□□ -0.36
CIT-205ENST00000488203 TNRQ92752 1358 aa12.82□□□□□ -0.36
CIT-205ENST00000488203 CDK19Q9BWU1 502 aa12.8□□□□□ -0.36
CIT-205ENST00000488203 PLEKHH1Q9ULM0 1364 aa12.8□□□□□ -0.36
CIT-205ENST00000488203 PUS7Q96PZ0 661 aaKnown RBP12.79□□□□□ -0.36
CIT-205ENST00000488203 METP08581 1390 aa12.79□□□□□ -0.36
CIT-205ENST00000488203 CGNL1Q0VF96 1302 aa12.78□□□□□ -0.36
CIT-205ENST00000488203 ANKRD36BQ8N2N9 1353 aa12.78□□□□□ -0.36
CIT-205ENST00000488203 TXNDC2Q86VQ3 553 aa12.78□□□□□ -0.36
CIT-205ENST00000488203 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.78□□□□□ -0.36
CIT-205ENST00000488203 INSRP06213 1382 aa12.77□□□□□ -0.36
CIT-205ENST00000488203 B4GALNT3Q6L9W6 998 aa12.77□□□□□ -0.36
CIT-205ENST00000488203 PPP4R2Q9NY27 417 aa12.77□□□□□ -0.36
CIT-205ENST00000488203 RNF123Q5XPI4 1314 aa12.77□□□□□ -0.37
CIT-205ENST00000488203 A0A1W2PP64 1363 aa12.77□□□□□ -0.37
CIT-205ENST00000488203 PDE3BQ13370 1112 aa12.77□□□□□ -0.37
CIT-205ENST00000488203 CABP1Q9NZU7 370 aa12.76□□□□□ -0.37
CIT-205ENST00000488203 MTHFSP49914 203 aa12.76□□□□□ -0.37
CIT-205ENST00000488203 RCAN3Q9UKA8 241 aa12.76□□□□□ -0.37
CIT-205ENST00000488203 APAF1O14727 1248 aa12.75□□□□□ -0.37
CIT-205ENST00000488203 LTKP29376 864 aa12.75□□□□□ -0.37
CIT-205ENST00000488203 ERICH6BQ5W0A0 696 aa12.75□□□□□ -0.37
CIT-205ENST00000488203 GGNBP2Q9H3C7 697 aa12.75□□□□□ -0.37
CIT-205ENST00000488203 TMEM2Q9UHN6 1383 aa12.74□□□□□ -0.37
CIT-205ENST00000488203 NRXN3Q9Y4C0 1643 aa12.74□□□□□ -0.37
CIT-205ENST00000488203 HDGFP51858 240 aaKnown RBP12.73□□□□□ -0.37
CIT-205ENST00000488203 ATAD2Q6PL18 1390 aa12.73□□□□□ -0.37
CIT-205ENST00000488203 ABCC11Q96J66 1382 aa12.73□□□□□ -0.37
CIT-205ENST00000488203 SETD1AO15047 1707 aaKnown RBP12.73□□□□□ -0.37
CIT-205ENST00000488203 TERF2IPQ9NYB0 399 aa12.73□□□□□ -0.37
CIT-205ENST00000488203 POLR3AO14802 1390 aaPredicted RBP12.73□□□□□ -0.37
CIT-205ENST00000488203 CD163L1Q9NR16 1453 aa12.73□□□□□ -0.37
CIT-205ENST00000488203 FYB1O15117 783 aa12.72□□□□□ -0.37
CIT-205ENST00000488203 DEKP35659 375 aaKnown RBP12.72□□□□□ -0.37
CIT-205ENST00000488203 RRP1P56182 461 aaKnown RBP12.72□□□□□ -0.37
CIT-205ENST00000488203 SLC26A8Q96RN1 970 aa12.72□□□□□ -0.37
CIT-205ENST00000488203 NCKAP5LQ9HCH0 1330 aa12.71□□□□□ -0.37
CIT-205ENST00000488203 ZNF521Q96K83 1311 aa12.71□□□□□ -0.38
CIT-205ENST00000488203 PLIN1O60240 522 aa12.71□□□□□ -0.38
CIT-205ENST00000488203 HDGFL2Q7Z4V5 671 aaPredicted RBP12.71□□□□□ -0.38
CIT-205ENST00000488203 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.71□□□□□ -0.38
CIT-205ENST00000488203 UBR1Q8IWV7 1749 aa12.7□□□□□ -0.38
CIT-205ENST00000488203 DLC1Q96QB1 1528 aa12.7□□□□□ -0.38
CIT-205ENST00000488203 NINLQ9Y2I6 1382 aa12.7□□□□□ -0.38
CIT-205ENST00000488203 SPINK5Q9NQ38 1064 aaPredicted RBP12.7□□□□□ -0.38
CIT-205ENST00000488203 USP32Q8NFA0 1604 aa12.7□□□□□ -0.38
CIT-205ENST00000488203 WASLO00401 505 aaPredicted RBP12.69□□□□□ -0.38
CIT-205ENST00000488203 GOLGA2Q08379 1002 aa12.69□□□□□ -0.38
CIT-205ENST00000488203 DMRT2Q9Y5R5 561 aa12.69□□□□□ -0.38
CIT-205ENST00000488203 FBLN1P23142 703 aa12.69□□□□□ -0.38
CIT-205ENST00000488203 RRP7AQ9Y3A4 280 aaKnown RBP12.69□□□□□ -0.38
CIT-205ENST00000488203 NSD2O96028 1365 aa12.69□□□□□ -0.38
CIT-205ENST00000488203 NEUROD2Q15784 382 aa12.68□□□□□ -0.38
CIT-205ENST00000488203 DUSP27Q5VZP5 1158 aa12.68□□□□□ -0.38
CIT-205ENST00000488203 CFAP53Q96M91 514 aa12.68□□□□□ -0.38
CIT-205ENST00000488203 ADAMTS13Q76LX8 1427 aa12.68□□□□□ -0.38
CIT-205ENST00000488203 ROBO2Q9HCK4 1378 aa12.68□□□□□ -0.38
CIT-205ENST00000488203 EXOC6Q8TAG9 804 aa12.67□□□□□ -0.38
CIT-205ENST00000488203 SLFN5Q08AF3 891 aa12.67□□□□□ -0.38
CIT-205ENST00000488203 NUDT16Q96DE0 195 aaKnown RBP12.67□□□□□ -0.38
CIT-205ENST00000488203 C3P01024 1663 aa12.67□□□□□ -0.38
CIT-205ENST00000488203 NLRP1Q9C000 1473 aa12.66□□□□□ -0.38
CIT-205ENST00000488203 NUTM2FA1L443 756 aa12.66□□□□□ -0.38
CIT-205ENST00000488203 EID1Q9Y6B2 187 aa12.66□□□□□ -0.38
CIT-205ENST00000488203 SHPRHQ149N8 1683 aa12.66□□□□□ -0.38
CIT-205ENST00000488203 U2AF1L5P0DN76 240 aaPredicted RBP12.65□□□□□ -0.38
CIT-205ENST00000488203 U2AF1Q01081 240 aaKnown RBP eCLIP12.65□□□□□ -0.38
CIT-205ENST00000488203 RUNDC1Q96C34 613 aa12.65□□□□□ -0.38
CIT-205ENST00000488203 CCDC136Q96JN2 1154 aa12.65□□□□□ -0.38
CIT-205ENST00000488203 ZRANB1Q9UGI0 708 aa12.65□□□□□ -0.38
CIT-205ENST00000488203 PLEKHG1Q9ULL1 1385 aa12.65□□□□□ -0.38
CIT-205ENST00000488203 PPIP5K1Q6PFW1 1433 aa12.65□□□□□ -0.38
CIT-205ENST00000488203 TCP11L2Q8N4U5 519 aa12.64□□□□□ -0.39
CIT-205ENST00000488203 U2SURPO15042 1029 aaKnown RBP12.64□□□□□ -0.39
CIT-205ENST00000488203 SIRT1Q96EB6 747 aa12.64□□□□□ -0.39
CIT-205ENST00000488203 FER1L4A9Z1Z3 1794 aa12.64□□□□□ -0.39
CIT-205ENST00000488203 FAM135BQ49AJ0 1406 aa12.64□□□□□ -0.39
CIT-205ENST00000488203 PRR36Q9H6K5 1346 aa12.64□□□□□ -0.39
CIT-205ENST00000488203 NME9Q86XW9 330 aa12.63□□□□□ -0.39
CIT-205ENST00000488203 WWC1Q8IX03 1113 aa12.63□□□□□ -0.39
CIT-205ENST00000488203 TRMT2AQ8IZ69 625 aaKnown RBP12.63□□□□□ -0.39
CIT-205ENST00000488203 TECPR2O15040 1411 aa12.63□□□□□ -0.39
CIT-205ENST00000488203 PTPRUQ92729 1446 aa12.63□□□□□ -0.39
CIT-205ENST00000488203 PPM1GO15355 546 aaPredicted RBP12.63□□□□□ -0.39
CIT-205ENST00000488203 C20orf194Q5TEA3 1177 aa12.63□□□□□ -0.39
CIT-205ENST00000488203 THEMISQ8N1K5 641 aaPredicted RBP12.62□□□□□ -0.39
CIT-205ENST00000488203 CCDC61Q9Y6R9 512 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms