RNA–Protein interactions for RNA: ENST00000488117.5

C9orf72-205, Transcript of chromosome 9 open reading frame 72, humanhuman

TSL 2

Gene C9orf72, Length 4,808 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72-205ENST00000488117 GLI2P10070 1586 aa3.43□□□□□ -1.86
C9orf72-205ENST00000488117 NRXN1Q9ULB1 1477 aa3.43□□□□□ -1.86
C9orf72-205ENST00000488117 ARHGAP31Q2M1Z3 1444 aa3.43□□□□□ -1.86
C9orf72-205ENST00000488117 ADRA2BP18089 450 aa3.43□□□□□ -1.86
C9orf72-205ENST00000488117 TMEM132EQ6IEE7 984 aa3.43□□□□□ -1.86
C9orf72-205ENST00000488117 MROH2AA6NES4 1674 aa3.43□□□□□ -1.86
C9orf72-205ENST00000488117 MYO3AQ8NEV4 1616 aa3.43□□□□□ -1.86
C9orf72-205ENST00000488117 DIP2CQ9Y2E4 1556 aa3.43□□□□□ -1.86
C9orf72-205ENST00000488117 SAFB2Q14151 953 aaKnown RBP eCLIP3.43□□□□□ -1.86
C9orf72-205ENST00000488117 CENPQQ7L2Z9 268 aaPredicted RBP3.43□□□□□ -1.86
C9orf72-205ENST00000488117 NPM2Q86SE8 214 aaKnown RBP3.43□□□□□ -1.86
C9orf72-205ENST00000488117 NOP58Q9Y2X3 529 aaKnown RBP3.43□□□□□ -1.86
C9orf72-205ENST00000488117 POLR3AO14802 1390 aaPredicted RBP3.43□□□□□ -1.86
C9orf72-205ENST00000488117 QRICH2Q9H0J4 1663 aa3.43□□□□□ -1.86
C9orf72-205ENST00000488117 CRBNQ96SW2 442 aa3.42□□□□□ -1.86
C9orf72-205ENST00000488117 APAF1O14727 1248 aa3.42□□□□□ -1.86
C9orf72-205ENST00000488117 MLECQ14165 292 aa3.42□□□□□ -1.86
C9orf72-205ENST00000488117 CDCA7LQ96GN5 454 aa3.42□□□□□ -1.86
C9orf72-205ENST00000488117 NKTRP30414 1462 aaKnown RBP3.42□□□□□ -1.86
C9orf72-205ENST00000488117 ANKRD36BQ8N2N9 1353 aa3.42□□□□□ -1.86
C9orf72-205ENST00000488117 FRMPD1Q5SYB0 1578 aa3.42□□□□□ -1.86
C9orf72-205ENST00000488117 IFT172Q9UG01 1749 aa3.42□□□□□ -1.86
C9orf72-205ENST00000488117 U2SURPO15042 1029 aaKnown RBP3.42□□□□□ -1.86
C9orf72-205ENST00000488117 U2AF1L5P0DN76 240 aaPredicted RBP3.42□□□□□ -1.86
C9orf72-205ENST00000488117 U2AF1Q01081 240 aaKnown RBP eCLIP3.42□□□□□ -1.86
C9orf72-205ENST00000488117 AAMPQ13685 434 aa3.42□□□□□ -1.86
C9orf72-205ENST00000488117 PPLO60437 1756 aa3.42□□□□□ -1.86
C9orf72-205ENST00000488117 NEUROD2Q15784 382 aa3.42□□□□□ -1.86
C9orf72-205ENST00000488117 CABP2Q9NPB3 220 aa3.42□□□□□ -1.86
C9orf72-205ENST00000488117 MINK1Q8N4C8 1332 aaPredicted RBP3.41□□□□□ -1.86
C9orf72-205ENST00000488117 ZFYVE9O95405 1425 aa3.41□□□□□ -1.86
C9orf72-205ENST00000488117 CALD1Q05682 793 aaKnown RBP3.41□□□□□ -1.86
C9orf72-205ENST00000488117 SLFN5Q08AF3 891 aa3.41□□□□□ -1.86
C9orf72-205ENST00000488117 IDI1Q13907 227 aa3.41□□□□□ -1.86
C9orf72-205ENST00000488117 SLC12A5Q9H2X9 1139 aa3.41□□□□□ -1.86
C9orf72-205ENST00000488117 CHMP4BQ9H444 224 aaKnown RBP3.41□□□□□ -1.86
C9orf72-205ENST00000488117 KIF13AQ9H1H9 1805 aa3.41□□□□□ -1.86
C9orf72-205ENST00000488117 PLIN1O60240 522 aa3.41□□□□□ -1.86
C9orf72-205ENST00000488117 WDR63Q8IWG1 891 aa3.41□□□□□ -1.86
C9orf72-205ENST00000488117 FTSJ3Q8IY81 847 aaKnown RBP3.41□□□□□ -1.86
C9orf72-205ENST00000488117 PRAM1Q96QH2 718 aa3.41□□□□□ -1.86
C9orf72-205ENST00000488117 DNAJC5Q9H3Z4 198 aa3.41□□□□□ -1.86
C9orf72-205ENST00000488117 UPF2Q9HAU5 1272 aaKnown RBP3.41□□□□□ -1.86
C9orf72-205ENST00000488117 YEATS2Q9ULM3 1422 aa3.41□□□□□ -1.86
C9orf72-205ENST00000488117 PMFBP1Q8TBY8 1022 aa3.41□□□□□ -1.86
C9orf72-205ENST00000488117 FRAT1Q92837 279 aaPredicted RBP3.41□□□□□ -1.86
C9orf72-205ENST00000488117 IPO9Q96P70 1041 aaKnown RBP3.41□□□□□ -1.86
C9orf72-205ENST00000488117 MYOM1P52179 1685 aa3.41□□□□□ -1.86
C9orf72-205ENST00000488117 MTHFSP49914 203 aa3.4□□□□□ -1.86
C9orf72-205ENST00000488117 USP32Q8NFA0 1604 aa3.4□□□□□ -1.86
C9orf72-205ENST00000488117 NEXMIFQ5QGS0 1516 aa3.4□□□□□ -1.86
C9orf72-205ENST00000488117 YTHDC2Q9H6S0 1430 aaKnown RBP3.4□□□□□ -1.86
C9orf72-205ENST00000488117 DIAPH1O60610 1272 aaKnown RBP3.4□□□□□ -1.87
C9orf72-205ENST00000488117 DUSP27Q5VZP5 1158 aa3.4□□□□□ -1.87
C9orf72-205ENST00000488117 RICTORQ6R327 1708 aa3.4□□□□□ -1.87
C9orf72-205ENST00000488117 RIMS2Q9UQ26 1411 aa3.4□□□□□ -1.87
C9orf72-205ENST00000488117 CT47B1P0C2W7 299 aaPredicted RBP3.4□□□□□ -1.87
C9orf72-205ENST00000488117 CDK19Q9BWU1 502 aa3.4□□□□□ -1.87
C9orf72-205ENST00000488117 CARD14Q9BXL6 1004 aa3.4□□□□□ -1.87
C9orf72-205ENST00000488117 EID1Q9Y6B2 187 aa3.4□□□□□ -1.87
C9orf72-205ENST00000488117 PREX1Q8TCU6 1659 aa3.4□□□□□ -1.87
C9orf72-205ENST00000488117 RIMBP3CA6NJZ7 1639 aa3.4□□□□□ -1.87
C9orf72-205ENST00000488117 RIMBP3BA6NNM3 1639 aa3.4□□□□□ -1.87
C9orf72-205ENST00000488117 PIK3C2BO00750 1634 aa3.4□□□□□ -1.87
C9orf72-205ENST00000488117 RIMBP3Q9UFD9 1639 aa3.4□□□□□ -1.87
C9orf72-205ENST00000488117 IPO8O15397 1037 aaKnown RBP3.4□□□□□ -1.87
C9orf72-205ENST00000488117 PDE4AP27815 886 aa3.4□□□□□ -1.87
C9orf72-205ENST00000488117 LMOD3Q0VAK6 560 aa3.4□□□□□ -1.87
C9orf72-205ENST00000488117 PDE3AQ14432 1141 aa3.4□□□□□ -1.87
C9orf72-205ENST00000488117 NCBP3Q53F19 620 aaKnown RBP3.4□□□□□ -1.87
C9orf72-205ENST00000488117 TCP11L2Q8N4U5 519 aa3.4□□□□□ -1.87
C9orf72-205ENST00000488117 RWDD1Q9H446 243 aaPredicted RBP3.4□□□□□ -1.87
C9orf72-205ENST00000488117 PLEKHH1Q9ULM0 1364 aa3.39□□□□□ -1.87
C9orf72-205ENST00000488117 AGLP35573 1532 aa3.39□□□□□ -1.87
C9orf72-205ENST00000488117 PPM1GO15355 546 aaPredicted RBP3.39□□□□□ -1.87
C9orf72-205ENST00000488117 RRP7AQ9Y3A4 280 aaKnown RBP3.39□□□□□ -1.87
C9orf72-205ENST00000488117 ABCC11Q96J66 1382 aa3.39□□□□□ -1.87
C9orf72-205ENST00000488117 ADGRB1O14514 1584 aa3.39□□□□□ -1.87
C9orf72-205ENST00000488117 REREQ9P2R6 1566 aa3.39□□□□□ -1.87
C9orf72-205ENST00000488117 WWC1Q8IX03 1113 aa3.39□□□□□ -1.87
C9orf72-205ENST00000488117 HAP1P54257 671 aaPredicted RBP3.39□□□□□ -1.87
C9orf72-205ENST00000488117 CCDC27Q2M243 656 aa3.39□□□□□ -1.87
C9orf72-205ENST00000488117 COG3Q96JB2 828 aa3.39□□□□□ -1.87
C9orf72-205ENST00000488117 GGNBP2Q9H3C7 697 aa3.39□□□□□ -1.87
C9orf72-205ENST00000488117 DIP2BQ9P265 1576 aa3.39□□□□□ -1.87
C9orf72-205ENST00000488117 BECN1Q14457 450 aa3.39□□□□□ -1.87
C9orf72-205ENST00000488117 FAM161AQ3B820 660 aa3.39□□□□□ -1.87
C9orf72-205ENST00000488117 FBXO31Q5XUX0 539 aaPredicted RBP3.39□□□□□ -1.87
C9orf72-205ENST00000488117 ZKSCAN2Q63HK3 967 aa3.39□□□□□ -1.87
C9orf72-205ENST00000488117 SUGP2Q8IX01 1082 aaKnown RBP eCLIP3.39□□□□□ -1.87
C9orf72-205ENST00000488117 EIF5BO60841 1220 aaKnown RBP3.38□□□□□ -1.87
C9orf72-205ENST00000488117 RGS3P49796 1198 aa3.38□□□□□ -1.87
C9orf72-205ENST00000488117 A0A1W2PP64 1363 aa3.38□□□□□ -1.87
C9orf72-205ENST00000488117 TNRQ92752 1358 aa3.38□□□□□ -1.87
C9orf72-205ENST00000488117 ARHGEF28Q8N1W1 1705 aaKnown RBP3.38□□□□□ -1.87
C9orf72-205ENST00000488117 TULP4Q9NRJ4 1543 aa3.38□□□□□ -1.87
C9orf72-205ENST00000488117 SMC4Q9NTJ3 1288 aa3.38□□□□□ -1.87
C9orf72-205ENST00000488117 CLTCQ00610 1675 aaKnown RBP3.38□□□□□ -1.87
C9orf72-205ENST00000488117 ALKQ9UM73 1620 aa3.38□□□□□ -1.87
C9orf72-205ENST00000488117 CLUAP1Q96AJ1 413 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms