RNA–Protein interactions for RNA: ENST00000487711.5

TTC3-220, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 925 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-220ENST00000487711 C6orf229H3BNL8 230 aa8.88□□□□□ -0.99
TTC3-220ENST00000487711 PLA2G2EQ9NZK7 142 aa8.88□□□□□ -0.99
TTC3-220ENST00000487711 PCDHB15Q9Y5E8 787 aa8.88□□□□□ -0.99
TTC3-220ENST00000487711 BRICD5Q6PL45 260 aa8.87□□□□□ -0.99
TTC3-220ENST00000487711 RNF19BQ6ZMZ0 732 aa8.87□□□□□ -0.99
TTC3-220ENST00000487711 PROCA1Q8NCQ7 364 aaPredicted RBP8.87□□□□□ -0.99
TTC3-220ENST00000487711 SYMPKQ92797 1274 aaKnown RBP8.87□□□□□ -0.99
TTC3-220ENST00000487711 SPSB2Q99619 263 aa8.87□□□□□ -0.99
TTC3-220ENST00000487711 SALL2Q9Y467 1007 aaPredicted RBP8.87□□□□□ -0.99
TTC3-220ENST00000487711 NUTM2BA6NNL0 878 aaPredicted RBP8.86□□□□□ -0.99
TTC3-220ENST00000487711 NUTM2EB1AL46 878 aaPredicted RBP8.86□□□□□ -0.99
TTC3-220ENST00000487711 TMEM132AQ24JP5 1023 aa8.86□□□□□ -0.99
TTC3-220ENST00000487711 NUTM2DQ5VT03 806 aaPredicted RBP8.86□□□□□ -0.99
TTC3-220ENST00000487711 NUTM2AQ8IVF1 878 aaPredicted RBP8.86□□□□□ -0.99
TTC3-220ENST00000487711 NKX2-3Q8TAU0 364 aa8.86□□□□□ -0.99
TTC3-220ENST00000487711 THAP11Q96EK4 314 aa8.86□□□□□ -0.99
TTC3-220ENST00000487711 ZBTB3Q9H5J0 574 aa8.86□□□□□ -0.99
TTC3-220ENST00000487711 ADH1BP00325 375 aa8.85□□□□□ -0.99
TTC3-220ENST00000487711 MTMR2Q13614 643 aa8.85□□□□□ -0.99
TTC3-220ENST00000487711 QPCTQ16769 361 aa8.85□□□□□ -0.99
TTC3-220ENST00000487711 TUSC1Q2TAM9 212 aa8.85□□□□□ -0.99
TTC3-220ENST00000487711 USB1Q9BQ65 265 aaKnown RBP8.85□□□□□ -0.99
TTC3-220ENST00000487711 HRCP23327 699 aa8.84□□□□□ -0.99
TTC3-220ENST00000487711 PRPF38BQ5VTL8 546 aaKnown RBP8.84□□□□□ -0.99
TTC3-220ENST00000487711 CABLES1Q8TDN4 633 aa8.84□□□□□ -0.99
TTC3-220ENST00000487711 RETREG3Q86VR2 466 aa8.83□□□□□ -1
TTC3-220ENST00000487711 SPDYE5A6NIY4 337 aa8.82□□□□□ -1
TTC3-220ENST00000487711 LILRB3O75022 631 aa8.82□□□□□ -1
TTC3-220ENST00000487711 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.82□□□□□ -1
TTC3-220ENST00000487711 SLC6A16Q9GZN6 736 aa8.82□□□□□ -1
TTC3-220ENST00000487711 IFFO2Q5TF58 517 aa8.81□□□□□ -1
TTC3-220ENST00000487711 FAM160A2Q8N612 972 aaPredicted RBP8.81□□□□□ -1
TTC3-220ENST00000487711 MSS51Q4VC12 460 aa8.8□□□□□ -1
TTC3-220ENST00000487711 RTL5Q5HYW3 569 aaPredicted RBP8.8□□□□□ -1
TTC3-220ENST00000487711 PRR7Q8TB68 274 aa8.8□□□□□ -1
TTC3-220ENST00000487711 TSC1Q92574 1164 aa8.8□□□□□ -1
TTC3-220ENST00000487711 S1PR4O95977 384 aa8.79□□□□□ -1
TTC3-220ENST00000487711 GGCXP38435 758 aa8.79□□□□□ -1
TTC3-220ENST00000487711 PRDM9Q9NQV7 894 aa8.79□□□□□ -1
TTC3-220ENST00000487711 CFAP99D6REC4 459 aa8.78□□□□□ -1
TTC3-220ENST00000487711 FBXO31Q5XUX0 539 aaPredicted RBP8.77□□□□□ -1.01
TTC3-220ENST00000487711 PPP2R2DQ66LE6 453 aa8.77□□□□□ -1.01
TTC3-220ENST00000487711 PPP1R18Q6NYC8 613 aa8.77□□□□□ -1.01
TTC3-220ENST00000487711 JUNDP17535 347 aa8.76□□□□□ -1.01
TTC3-220ENST00000487711 RFC5P40937 340 aa8.76□□□□□ -1.01
TTC3-220ENST00000487711 HELBQ8NG08 1087 aaPredicted RBP8.76□□□□□ -1.01
TTC3-220ENST00000487711 DXOO77932 396 aaKnown RBP8.75□□□□□ -1.01
TTC3-220ENST00000487711 MMP16P51512 607 aa8.75□□□□□ -1.01
TTC3-220ENST00000487711 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.75□□□□□ -1.01
TTC3-220ENST00000487711 A0A0G2JS52 829 aa8.74□□□□□ -1.01
TTC3-220ENST00000487711 PPEF1O14829 653 aaPredicted RBP8.74□□□□□ -1.01
TTC3-220ENST00000487711 DESI1Q6ICB0 168 aa8.74□□□□□ -1.01
TTC3-220ENST00000487711 RNF223E7ERA6 249 aa8.73□□□□□ -1.01
TTC3-220ENST00000487711 AP1G2O75843 785 aa8.73□□□□□ -1.01
TTC3-220ENST00000487711 TMEM259Q4ZIN3 620 aa8.72□□□□□ -1.01
TTC3-220ENST00000487711 FCF1Q9Y324 198 aaKnown RBP8.72□□□□□ -1.01
TTC3-220ENST00000487711 CCDC24Q8N4L8 307 aa8.71□□□□□ -1.02
TTC3-220ENST00000487711 ANKLE1Q8NAG6 615 aa8.71□□□□□ -1.02
TTC3-220ENST00000487711 CTDSPL2Q05D32 466 aa8.7□□□□□ -1.02
TTC3-220ENST00000487711 PTPRNQ16849 979 aa8.7□□□□□ -1.02
TTC3-220ENST00000487711 LYPD8Q6UX82 237 aa8.7□□□□□ -1.02
TTC3-220ENST00000487711 NUDT12Q9BQG2 462 aa8.7□□□□□ -1.02
TTC3-220ENST00000487711 PER1O15534 1290 aaPredicted RBP8.69□□□□□ -1.02
TTC3-220ENST00000487711 CCNYL3P0C7X3 344 aa8.69□□□□□ -1.02
TTC3-220ENST00000487711 USP17L8P0C7I0 530 aa8.68□□□□□ -1.02
TTC3-220ENST00000487711 CTHP32929 405 aa8.67□□□□□ -1.02
TTC3-220ENST00000487711 LRRN4Q8WUT4 740 aa8.66□□□□□ -1.02
TTC3-220ENST00000487711 ZBTB24O43167 697 aaPredicted RBP8.65□□□□□ -1.02
TTC3-220ENST00000487711 PLA2G2CQ5R387 149 aa8.65□□□□□ -1.02
TTC3-220ENST00000487711 BANK1Q8NDB2 785 aa8.65□□□□□ -1.02
TTC3-220ENST00000487711 EVA1BQ9NVM1 165 aa8.65□□□□□ -1.02
TTC3-220ENST00000487711 KCNH2Q12809 1159 aa8.64□□□□□ -1.03
TTC3-220ENST00000487711 MAP10Q9P2G4 905 aa8.64□□□□□ -1.03
TTC3-220ENST00000487711 F12P00748 615 aaPredicted RBP8.63□□□□□ -1.03
TTC3-220ENST00000487711 SLC19A1P41440 591 aa8.62□□□□□ -1.03
TTC3-220ENST00000487711 PTCRAQ6ISU1 281 aaPredicted RBP8.62□□□□□ -1.03
TTC3-220ENST00000487711 PRKD2Q9BZL6 878 aa8.62□□□□□ -1.03
TTC3-220ENST00000487711 HMX1Q9NP08 348 aaPredicted RBP8.62□□□□□ -1.03
TTC3-220ENST00000487711 SNRKQ9NRH2 765 aa8.62□□□□□ -1.03
TTC3-220ENST00000487711 NR6A1Q15406 480 aa8.61□□□□□ -1.03
TTC3-220ENST00000487711 LIAT1Q6ZQX7 453 aa8.61□□□□□ -1.03
TTC3-220ENST00000487711 UNC93B1Q9H1C4 597 aa8.61□□□□□ -1.03
TTC3-220ENST00000487711 RPIAP49247 311 aa8.6□□□□□ -1.03
TTC3-220ENST00000487711 APBB1O00213 710 aa8.59□□□□□ -1.03
TTC3-220ENST00000487711 CD2BP2O95400 341 aaKnown RBP8.59□□□□□ -1.03
TTC3-220ENST00000487711 MTMR14Q8NCE2 650 aa8.59□□□□□ -1.03
TTC3-220ENST00000487711 EMID1Q96A84 441 aaPredicted RBP8.59□□□□□ -1.03
TTC3-220ENST00000487711 RGS20O76081 388 aa8.58□□□□□ -1.04
TTC3-220ENST00000487711 FLIIQ13045 1269 aa8.58□□□□□ -1.04
TTC3-220ENST00000487711 TRIM32Q13049 653 aa8.58□□□□□ -1.04
TTC3-220ENST00000487711 MCM6Q14566 821 aa8.58□□□□□ -1.04
TTC3-220ENST00000487711 EPS8L1Q8TE68 723 aa8.58□□□□□ -1.04
TTC3-220ENST00000487711 GTF3C3Q9Y5Q9 886 aa8.58□□□□□ -1.04
TTC3-220ENST00000487711 V9GY48 417 aaPredicted RBP8.58□□□□□ -1.04
TTC3-220ENST00000487711 PNMA1Q8ND90 353 aa8.57□□□□□ -1.04
TTC3-220ENST00000487711 ARMC2Q8NEN0 867 aa8.57□□□□□ -1.04
TTC3-220ENST00000487711 LINC01559Q495D7 138 aa8.56□□□□□ -1.04
TTC3-220ENST00000487711 SPRYD7Q5W111 196 aa8.56□□□□□ -1.04
TTC3-220ENST00000487711 BAP1Q92560 729 aa8.56□□□□□ -1.04
TTC3-220ENST00000487711 GJD4Q96KN9 370 aaPredicted RBP8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms