RNA–Protein interactions for RNA: ENST00000487563.1

PLOD3-215, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 2

Gene PLOD3, Length 712 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-215ENST00000487563 ABCC11Q96J66 1382 aa34.74■■■■□ 3.15
PLOD3-215ENST00000487563 MYOM2P54296 1465 aa34.73■■■■□ 3.15
PLOD3-215ENST00000487563 ZNF772Q68DY9 489 aaPredicted RBP34.72■■■■□ 3.15
PLOD3-215ENST00000487563 WAPLQ7Z5K2 1190 aa34.72■■■■□ 3.15
PLOD3-215ENST00000487563 YTHDC2Q9H6S0 1430 aaKnown RBP34.72■■■■□ 3.15
PLOD3-215ENST00000487563 PNPLA6Q8IY17 1366 aa34.71■■■■□ 3.15
PLOD3-215ENST00000487563 LAMC1P11047 1609 aa34.7■■■■□ 3.15
PLOD3-215ENST00000487563 NRXN1Q9ULB1 1477 aa34.69■■■■□ 3.14
PLOD3-215ENST00000487563 C14orf93Q9H972 538 aaKnown RBP34.67■■■■□ 3.14
PLOD3-215ENST00000487563 PLEKHH1Q9ULM0 1364 aa34.66■■■■□ 3.14
PLOD3-215ENST00000487563 ESCO1Q5FWF5 840 aa34.66■■■■□ 3.14
PLOD3-215ENST00000487563 DHX57Q6P158 1386 aaKnown RBP34.64■■■■□ 3.14
PLOD3-215ENST00000487563 SOS2Q07890 1332 aaPredicted RBP34.64■■■■□ 3.14
PLOD3-215ENST00000487563 CFAP70Q5T0N1 1121 aa34.64■■■■□ 3.14
PLOD3-215ENST00000487563 HRCP23327 699 aa34.63■■■■□ 3.13
PLOD3-215ENST00000487563 NUTM2FA1L443 756 aa34.61■■■■□ 3.13
PLOD3-215ENST00000487563 NPHP3Q7Z494 1330 aa34.6■■■■□ 3.13
PLOD3-215ENST00000487563 AFF2P51816 1311 aa34.59■■■■□ 3.13
PLOD3-215ENST00000487563 C8orf37Q96NL8 207 aa34.58■■■■□ 3.13
PLOD3-215ENST00000487563 SIRT1Q96EB6 747 aa34.57■■■■□ 3.12
PLOD3-215ENST00000487563 FMN2Q9NZ56 1722 aa34.56■■■■□ 3.12
PLOD3-215ENST00000487563 ADAMTS2O95450 1211 aa34.53■■■■□ 3.12
PLOD3-215ENST00000487563 KDM2AQ9Y2K7 1162 aa34.53■■■■□ 3.12
PLOD3-215ENST00000487563 FOXO3O43524 673 aa34.52■■■■□ 3.12
PLOD3-215ENST00000487563 DCAF11Q8TEB1 546 aa34.52■■■■□ 3.12
PLOD3-215ENST00000487563 RXRBP28702 533 aa34.51■■■■□ 3.12
PLOD3-215ENST00000487563 PRAM1Q96QH2 718 aa34.51■■■■□ 3.12
PLOD3-215ENST00000487563 PXDNQ92626 1479 aa34.51■■■■□ 3.11
PLOD3-215ENST00000487563 XPCQ01831 940 aaPredicted RBP34.5■■■■□ 3.11
PLOD3-215ENST00000487563 SAFB2Q14151 953 aaKnown RBP eCLIP34.5■■■■□ 3.11
PLOD3-215ENST00000487563 POGKQ9P215 609 aa34.49■■■■□ 3.11
PLOD3-215ENST00000487563 NGLY1Q96IV0 654 aa34.48■■■■□ 3.11
PLOD3-215ENST00000487563 DLC1Q96QB1 1528 aa34.48■■■■□ 3.11
PLOD3-215ENST00000487563 KIF1AQ12756 1690 aa34.47■■■■□ 3.11
PLOD3-215ENST00000487563 COL22A1Q8NFW1 1626 aaPredicted RBP34.47■■■■□ 3.11
PLOD3-215ENST00000487563 ADGRB1O14514 1584 aa34.45■■■■□ 3.11
PLOD3-215ENST00000487563 STAC3Q96MF2 364 aa34.45■■■■□ 3.11
PLOD3-215ENST00000487563 TRAK1Q9UPV9 953 aa34.41■■■■□ 3.1
PLOD3-215ENST00000487563 CDK12Q9NYV4 1490 aaPredicted RBP34.4■■■■□ 3.1
PLOD3-215ENST00000487563 QTRT2Q9H974 415 aaKnown RBP34.4■■■■□ 3.1
PLOD3-215ENST00000487563 PHF8Q9UPP1 1060 aa34.38■■■■□ 3.09
PLOD3-215ENST00000487563 RGPD8O14715 1765 aaPredicted RBP34.37■■■■□ 3.09
PLOD3-215ENST00000487563 ADGRB2O60241 1585 aa34.36■■■■□ 3.09
PLOD3-215ENST00000487563 RBM6P78332 1123 aaKnown RBP34.35■■■■□ 3.09
PLOD3-215ENST00000487563 KRT28Q7Z3Y7 464 aa34.35■■■■□ 3.09
PLOD3-215ENST00000487563 USP21Q9UK80 565 aa34.35■■■■□ 3.09
PLOD3-215ENST00000487563 SPATA31A3Q5VYP0 1347 aa34.32■■■■□ 3.09
PLOD3-215ENST00000487563 ANKARQ7Z5J8 1434 aa34.32■■■■□ 3.08
PLOD3-215ENST00000487563 MINK1Q8N4C8 1332 aaPredicted RBP34.31■■■■□ 3.08
PLOD3-215ENST00000487563 HIRIP3Q9BW71 556 aaPredicted RBP34.31■■■■□ 3.08
PLOD3-215ENST00000487563 PSME1Q06323 249 aa34.3■■■■□ 3.08
PLOD3-215ENST00000487563 EIF3AQ14152 1382 aaKnown RBP34.29■■■■□ 3.08
PLOD3-215ENST00000487563 FNBP4Q8N3X1 1017 aaPredicted RBP34.29■■■■□ 3.08
PLOD3-215ENST00000487563 RGS12O14924 1447 aa34.29■■■■□ 3.08
PLOD3-215ENST00000487563 MARF1Q9Y4F3 1742 aaKnown RBP34.28■■■■□ 3.08
PLOD3-215ENST00000487563 TRPC5Q9UL62 973 aaPredicted RBP34.28■■■■□ 3.08
PLOD3-215ENST00000487563 USP32Q8NFA0 1604 aa34.27■■■■□ 3.08
PLOD3-215ENST00000487563 TNS3Q68CZ2 1445 aa34.27■■■■□ 3.08
PLOD3-215ENST00000487563 PMFBP1Q8TBY8 1022 aa34.25■■■■□ 3.07
PLOD3-215ENST00000487563 HAP1P54257 671 aaPredicted RBP34.24■■■■□ 3.07
PLOD3-215ENST00000487563 UPF1Q92900 1129 aaKnown RBP eCLIP34.23■■■■□ 3.07
PLOD3-215ENST00000487563 ARHGEF28Q8N1W1 1705 aaKnown RBP34.23■■■■□ 3.07
PLOD3-215ENST00000487563 TULP4Q9NRJ4 1543 aa34.22■■■■□ 3.07
PLOD3-215ENST00000487563 LMOD2Q6P5Q4 547 aa34.22■■■■□ 3.07
PLOD3-215ENST00000487563 SBNO1A3KN83 1393 aa34.21■■■■□ 3.07
PLOD3-215ENST00000487563 ATRNO75882 1429 aa34.21■■■■□ 3.07
PLOD3-215ENST00000487563 WASLO00401 505 aaPredicted RBP34.2■■■■□ 3.07
PLOD3-215ENST00000487563 PLEKHG5O94827 1062 aa34.19■■■■□ 3.06
PLOD3-215ENST00000487563 ARHGEF10O15013 1369 aa34.18■■■■□ 3.06
PLOD3-215ENST00000487563 KIAA1210Q9ULL0 1709 aa34.18■■■■□ 3.06
PLOD3-215ENST00000487563 BCL9LQ86UU0 1499 aa34.16■■■■□ 3.06
PLOD3-215ENST00000487563 PRR36Q9H6K5 1346 aa34.16■■■■□ 3.06
PLOD3-215ENST00000487563 GPRASP1Q5JY77 1395 aa34.15■■■■□ 3.06
PLOD3-215ENST00000487563 CABLES1Q8TDN4 633 aa34.13■■■■□ 3.05
PLOD3-215ENST00000487563 TNKS1BP1Q9C0C2 1729 aaKnown RBP34.1■■■■□ 3.05
PLOD3-215ENST00000487563 NGDNQ8NEJ9 315 aaKnown RBP34.1■■■■□ 3.05
PLOD3-215ENST00000487563 ABCA3Q99758 1704 aa34.09■■■■□ 3.05
PLOD3-215ENST00000487563 SLIT2O94813 1529 aa34.09■■■■□ 3.05
PLOD3-215ENST00000487563 ITSN1Q15811 1721 aa34.08■■■■□ 3.05
PLOD3-215ENST00000487563 TRPM3Q9HCF6 1732 aaPredicted RBP34.08■■■■□ 3.05
PLOD3-215ENST00000487563 UNC5CLQ8IV45 518 aa34.08■■■■□ 3.05
PLOD3-215ENST00000487563 GJD4Q96KN9 370 aaPredicted RBP34.06■■■■□ 3.04
PLOD3-215ENST00000487563 ATAD2Q6PL18 1390 aa34.06■■■■□ 3.04
PLOD3-215ENST00000487563 ATP7BP35670 1465 aa34.06■■■■□ 3.04
PLOD3-215ENST00000487563 NBPF1Q3BBV0 1214 aa34.05■■■■□ 3.04
PLOD3-215ENST00000487563 NUDT16Q96DE0 195 aaKnown RBP34.05■■■■□ 3.04
PLOD3-215ENST00000487563 CDK19Q9BWU1 502 aa34.03■■■■□ 3.04
PLOD3-215ENST00000487563 ALS2Q96Q42 1657 aa34.02■■■■□ 3.04
PLOD3-215ENST00000487563 PLCH1Q4KWH8 1693 aa34.01■■■■□ 3.04
PLOD3-215ENST00000487563 PAK3O75914 559 aaPredicted RBP34.01■■■■□ 3.03
PLOD3-215ENST00000487563 L3MBTL2Q969R5 705 aa33.99■■■■□ 3.03
PLOD3-215ENST00000487563 RALGAPBQ86X10 1494 aa33.99■■■■□ 3.03
PLOD3-215ENST00000487563 NWD2Q9ULI1 1742 aa33.97■■■■□ 3.03
PLOD3-215ENST00000487563 SIN3AQ96ST3 1273 aa33.97■■■■□ 3.03
PLOD3-215ENST00000487563 NEUROD1Q13562 356 aa33.96■■■■□ 3.03
PLOD3-215ENST00000487563 GLI3P10071 1580 aa33.96■■■■□ 3.03
PLOD3-215ENST00000487563 CCDC9Q9Y3X0 531 aaKnown RBP33.95■■■■□ 3.03
PLOD3-215ENST00000487563 CENPJQ9HC77 1338 aaPredicted RBP33.95■■■■□ 3.03
PLOD3-215ENST00000487563 TOPAZ1Q8N9V7 1692 aa33.93■■■■□ 3.02
PLOD3-215ENST00000487563 VPS72Q15906 364 aa33.92■■■■□ 3.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms