RNA–Protein interactions for RNA: ENST00000487445.6

GCA-210, Transcript of grancalcin, humanhuman

TSL 5

Gene GCA, Length 1,808 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCA-210ENST00000487445 CDK19Q9BWU1 502 aa20■□□□□ 0.79
GCA-210ENST00000487445 QRICH2Q9H0J4 1663 aa20■□□□□ 0.79
GCA-210ENST00000487445 MIER1Q8N108 512 aa19.99■□□□□ 0.79
GCA-210ENST00000487445 TMC1Q8TDI8 760 aa19.99■□□□□ 0.79
GCA-210ENST00000487445 CPS1P31327 1500 aa19.98■□□□□ 0.79
GCA-210ENST00000487445 RBM33Q96EV2 1170 aaKnown RBP19.98■□□□□ 0.79
GCA-210ENST00000487445 CNGB1Q14028 1251 aaPredicted RBP19.97■□□□□ 0.79
GCA-210ENST00000487445 PANK3Q9H999 370 aa19.97■□□□□ 0.79
GCA-210ENST00000487445 POLR1AO95602 1720 aaPredicted RBP19.97■□□□□ 0.79
GCA-210ENST00000487445 PTCH1Q13635 1447 aa19.97■□□□□ 0.79
GCA-210ENST00000487445 WASLO00401 505 aaPredicted RBP19.96■□□□□ 0.79
GCA-210ENST00000487445 TULP4Q9NRJ4 1543 aa19.96■□□□□ 0.79
GCA-210ENST00000487445 ANP32CO43423 234 aa19.95■□□□□ 0.78
GCA-210ENST00000487445 PUS7Q96PZ0 661 aaKnown RBP19.95■□□□□ 0.78
GCA-210ENST00000487445 SLC12A5Q9H2X9 1139 aa19.95■□□□□ 0.78
GCA-210ENST00000487445 KNDC1Q76NI1 1749 aa19.93■□□□□ 0.78
GCA-210ENST00000487445 NUTM2FA1L443 756 aa19.92■□□□□ 0.78
GCA-210ENST00000487445 C14orf37Q86TY3 774 aa19.92■□□□□ 0.78
GCA-210ENST00000487445 PROSER2Q86WR7 435 aaPredicted RBP19.92■□□□□ 0.78
GCA-210ENST00000487445 ATAD2Q6PL18 1390 aa19.9■□□□□ 0.78
GCA-210ENST00000487445 XRN1Q8IZH2 1706 aaKnown RBP19.9■□□□□ 0.78
GCA-210ENST00000487445 NUDT16Q96DE0 195 aaKnown RBP19.88■□□□□ 0.77
GCA-210ENST00000487445 CABP1Q9NZU7 370 aa19.88■□□□□ 0.77
GCA-210ENST00000487445 DMRT2Q9Y5R5 561 aa19.88■□□□□ 0.77
GCA-210ENST00000487445 PER1O15534 1290 aaPredicted RBP19.88■□□□□ 0.77
GCA-210ENST00000487445 KNSTRNQ9Y448 316 aa19.88■□□□□ 0.77
GCA-210ENST00000487445 STRCQ7RTU9 1775 aa19.85■□□□□ 0.77
GCA-210ENST00000487445 CHD2O14647 1828 aaKnown RBP19.85■□□□□ 0.77
GCA-210ENST00000487445 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.85■□□□□ 0.77
GCA-210ENST00000487445 CARD14Q9BXL6 1004 aa19.85■□□□□ 0.77
GCA-210ENST00000487445 CCDC61Q9Y6R9 512 aa19.85■□□□□ 0.77
GCA-210ENST00000487445 ZNF335Q9H4Z2 1342 aaPredicted RBP19.85■□□□□ 0.77
GCA-210ENST00000487445 CC2D1BQ5T0F9 858 aaKnown RBP19.83■□□□□ 0.77
GCA-210ENST00000487445 PRKRIP1Q9H875 184 aaPredicted RBP19.83■□□□□ 0.77
GCA-210ENST00000487445 PRR36Q9H6K5 1346 aa19.83■□□□□ 0.77
GCA-210ENST00000487445 TERF2IPQ9NYB0 399 aa19.83■□□□□ 0.76
GCA-210ENST00000487445 NINLQ9Y2I6 1382 aa19.82■□□□□ 0.76
GCA-210ENST00000487445 HDGFL2Q7Z4V5 671 aaPredicted RBP19.81■□□□□ 0.76
GCA-210ENST00000487445 NWD1Q149M9 1564 aa19.81■□□□□ 0.76
GCA-210ENST00000487445 TMEM94Q12767 1356 aa19.81■□□□□ 0.76
GCA-210ENST00000487445 ANKRD36BQ8N2N9 1353 aa19.8■□□□□ 0.76
GCA-210ENST00000487445 PPIP5K1Q6PFW1 1433 aa19.8■□□□□ 0.76
GCA-210ENST00000487445 NKTRP30414 1462 aaKnown RBP19.8■□□□□ 0.76
GCA-210ENST00000487445 ADGRB2O60241 1585 aa19.79■□□□□ 0.76
GCA-210ENST00000487445 MYOM1P52179 1685 aa19.79■□□□□ 0.76
GCA-210ENST00000487445 ADGRL3Q9HAR2 1447 aa19.79■□□□□ 0.76
GCA-210ENST00000487445 A0A1W2PP64 1363 aa19.78■□□□□ 0.76
GCA-210ENST00000487445 C19orf44Q9H6X5 657 aa19.78■□□□□ 0.76
GCA-210ENST00000487445 KTN1Q86UP2 1357 aaKnown RBP19.78■□□□□ 0.76
GCA-210ENST00000487445 NSD3Q9BZ95 1437 aa19.78■□□□□ 0.76
GCA-210ENST00000487445 ATP7BP35670 1465 aa19.77■□□□□ 0.76
GCA-210ENST00000487445 AMER1Q5JTC6 1135 aaPredicted RBP19.77■□□□□ 0.76
GCA-210ENST00000487445 PMFBP1Q8TBY8 1022 aa19.76■□□□□ 0.75
GCA-210ENST00000487445 PLEKHG3A1L390 1219 aa19.74■□□□□ 0.75
GCA-210ENST00000487445 ATF3P18847 181 aa19.74■□□□□ 0.75
GCA-210ENST00000487445 RALBP1Q15311 655 aa19.74■□□□□ 0.75
GCA-210ENST00000487445 ACEP12821 1306 aa19.73■□□□□ 0.75
GCA-210ENST00000487445 CGNL1Q0VF96 1302 aa19.73■□□□□ 0.75
GCA-210ENST00000487445 CD163L1Q9NR16 1453 aa19.73■□□□□ 0.75
GCA-210ENST00000487445 NGDNQ8NEJ9 315 aaKnown RBP19.73■□□□□ 0.75
GCA-210ENST00000487445 ESCO1Q5FWF5 840 aa19.72■□□□□ 0.75
GCA-210ENST00000487445 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.72■□□□□ 0.754e-7■■■□□ 19
GCA-210ENST00000487445 CCER2I3L3R5 266 aa19.72■□□□□ 0.75
GCA-210ENST00000487445 ANKARQ7Z5J8 1434 aa19.72■□□□□ 0.75
GCA-210ENST00000487445 ZNF692Q9BU19 519 aaPredicted RBP19.72■□□□□ 0.75
GCA-210ENST00000487445 NCOA3Q9Y6Q9 1424 aa19.71■□□□□ 0.75
GCA-210ENST00000487445 STRCP1A6NGW2 1772 aa19.71■□□□□ 0.75
GCA-210ENST00000487445 NALCNQ8IZF0 1738 aa19.71■□□□□ 0.74
GCA-210ENST00000487445 CDC42BPGQ6DT37 1551 aa19.7■□□□□ 0.74
GCA-210ENST00000487445 MSH6P52701 1360 aa19.7■□□□□ 0.74
GCA-210ENST00000487445 CPSF1Q10570 1443 aaKnown RBP19.69■□□□□ 0.74
GCA-210ENST00000487445 LRRC7Q96NW7 1537 aa19.69■□□□□ 0.74
GCA-210ENST00000487445 CADPS2Q86UW7 1296 aa19.69■□□□□ 0.74
GCA-210ENST00000487445 PHF8Q9UPP1 1060 aa19.69■□□□□ 0.74
GCA-210ENST00000487445 PARD3Q8TEW0 1356 aa19.69■□□□□ 0.74
GCA-210ENST00000487445 NPC1L1Q9UHC9 1359 aa19.68■□□□□ 0.74
GCA-210ENST00000487445 ORAI2Q96SN7 254 aa19.68■□□□□ 0.74
GCA-210ENST00000487445 GGNBP2Q9H3C7 697 aa19.68■□□□□ 0.74
GCA-210ENST00000487445 MYBBP1AQ9BQG0 1328 aaKnown RBP19.68■□□□□ 0.74
GCA-210ENST00000487445 MORC1Q86VD1 984 aa19.67■□□□□ 0.74
GCA-210ENST00000487445 FYB1O15117 783 aa19.67■□□□□ 0.74
GCA-210ENST00000487445 TNNT2P45379 298 aaPredicted RBP19.67■□□□□ 0.74
GCA-210ENST00000487445 CCDC184Q52MB2 194 aa19.67■□□□□ 0.74
GCA-210ENST00000487445 MRS2Q9HD23 443 aa19.66■□□□□ 0.74
GCA-210ENST00000487445 USP32Q8NFA0 1604 aa19.65■□□□□ 0.74
GCA-210ENST00000487445 EDC4Q6P2E9 1401 aaKnown RBP19.64■□□□□ 0.73
GCA-210ENST00000487445 FMN2Q9NZ56 1722 aa19.64■□□□□ 0.73
GCA-210ENST00000487445 NME9Q86XW9 330 aa19.63■□□□□ 0.73
GCA-210ENST00000487445 POLR3AO14802 1390 aaPredicted RBP19.63■□□□□ 0.73
GCA-210ENST00000487445 DCCP43146 1447 aa19.63■□□□□ 0.73
GCA-210ENST00000487445 C1orf167Q5SNV9 1468 aa19.63■□□□□ 0.73
GCA-210ENST00000487445 TTC21BQ7Z4L5 1316 aa19.62■□□□□ 0.73
GCA-210ENST00000487445 FOXO3O43524 673 aa19.62■□□□□ 0.73
GCA-210ENST00000487445 PPP2R1AP30153 589 aa19.62■□□□□ 0.73
GCA-210ENST00000487445 PSME1Q06323 249 aa19.62■□□□□ 0.73
GCA-210ENST00000487445 NLRP13Q86W25 1043 aa19.62■□□□□ 0.73
GCA-210ENST00000487445 NSD2O96028 1365 aa19.62■□□□□ 0.73
GCA-210ENST00000487445 USP6P35125 1406 aa19.62■□□□□ 0.73
GCA-210ENST00000487445 YTHDC1Q96MU7 727 aaKnown RBP19.61■□□□□ 0.73
GCA-210ENST00000487445 PAK3O75914 559 aaPredicted RBP19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms