RNA–Protein interactions for RNA: ENST00000487299.5

DPPA4-206, Transcript of developmental pluripotency associated 4, humanhuman

TSL 2

Gene DPPA4, Length 731 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DPPA4-206ENST00000487299 ZNF326Q5BKZ1 582 aaKnown RBP14.86□□□□□ -0.03
DPPA4-206ENST00000487299 ADGRL3Q9HAR2 1447 aa14.84□□□□□ -0.03
DPPA4-206ENST00000487299 DDX17Q92841 729 aaKnown RBP14.84□□□□□ -0.03
DPPA4-206ENST00000487299 SETD5Q9C0A6 1442 aa14.83□□□□□ -0.03
DPPA4-206ENST00000487299 KIF1BO60333 1816 aa14.82□□□□□ -0.04
DPPA4-206ENST00000487299 PITPNM1O00562 1244 aa14.81□□□□□ -0.04
DPPA4-206ENST00000487299 ROBO2Q9HCK4 1378 aa14.81□□□□□ -0.04
DPPA4-206ENST00000487299 HFM1A2PYH4 1435 aa14.81□□□□□ -0.04
DPPA4-206ENST00000487299 MEX3CQ5U5Q3 659 aaKnown RBP14.8□□□□□ -0.04
DPPA4-206ENST00000487299 PTCH1Q13635 1447 aa14.8□□□□□ -0.04
DPPA4-206ENST00000487299 NUTM2BA6NNL0 878 aaPredicted RBP14.79□□□□□ -0.04
DPPA4-206ENST00000487299 NUTM2EB1AL46 878 aaPredicted RBP14.79□□□□□ -0.04
DPPA4-206ENST00000487299 C1orf167Q5SNV9 1468 aa14.79□□□□□ -0.04
DPPA4-206ENST00000487299 NUTM2AQ8IVF1 878 aaPredicted RBP14.79□□□□□ -0.04
DPPA4-206ENST00000487299 PRAG1Q86YV5 1406 aa14.78□□□□□ -0.04
DPPA4-206ENST00000487299 PNPLA6Q8IY17 1366 aa14.78□□□□□ -0.04
DPPA4-206ENST00000487299 ZNF772Q68DY9 489 aaPredicted RBP14.78□□□□□ -0.04
DPPA4-206ENST00000487299 TRIM52Q96A61 297 aa14.78□□□□□ -0.04
DPPA4-206ENST00000487299 LAMC1P11047 1609 aa14.77□□□□□ -0.04
DPPA4-206ENST00000487299 PPLO60437 1756 aa14.77□□□□□ -0.05
DPPA4-206ENST00000487299 AFF2P51816 1311 aa14.76□□□□□ -0.05
DPPA4-206ENST00000487299 FXR2P51116 673 aaKnown RBP eCLIP14.76□□□□□ -0.05
DPPA4-206ENST00000487299 UPF1Q92900 1129 aaKnown RBP eCLIP14.76□□□□□ -0.05
DPPA4-206ENST00000487299 ORAI2Q96SN7 254 aa14.74□□□□□ -0.05
DPPA4-206ENST00000487299 HAX1O00165 279 aa14.73□□□□□ -0.05
DPPA4-206ENST00000487299 LRRC59Q96AG4 307 aaKnown RBP14.73□□□□□ -0.05
DPPA4-206ENST00000487299 CDK12Q9NYV4 1490 aaPredicted RBP14.73□□□□□ -0.05
DPPA4-206ENST00000487299 RGS12O14924 1447 aa14.73□□□□□ -0.05
DPPA4-206ENST00000487299 SOS2Q07890 1332 aaPredicted RBP14.72□□□□□ -0.05
DPPA4-206ENST00000487299 VGFO15240 615 aaPredicted RBP14.72□□□□□ -0.05
DPPA4-206ENST00000487299 RXRBP28702 533 aa14.72□□□□□ -0.05
DPPA4-206ENST00000487299 RPGRIP1LQ68CZ1 1315 aa14.71□□□□□ -0.05
DPPA4-206ENST00000487299 ADGRF5Q8IZF2 1346 aa14.71□□□□□ -0.05
DPPA4-206ENST00000487299 C8orf37Q96NL8 207 aa14.71□□□□□ -0.05
DPPA4-206ENST00000487299 SPATA31E1Q6ZUB1 1445 aa14.71□□□□□ -0.05
DPPA4-206ENST00000487299 SRCAPQ6ZRS2 3230 aa14.69□□□□□ -0.06
DPPA4-206ENST00000487299 IFT172Q9UG01 1749 aa14.69□□□□□ -0.06
DPPA4-206ENST00000487299 CDC42BPGQ6DT37 1551 aa14.68□□□□□ -0.06
DPPA4-206ENST00000487299 COL22A1Q8NFW1 1626 aaPredicted RBP14.67□□□□□ -0.06
DPPA4-206ENST00000487299 ADAMTS2O95450 1211 aa14.67□□□□□ -0.06
DPPA4-206ENST00000487299 EP400Q96L91 3159 aa14.67□□□□□ -0.06
DPPA4-206ENST00000487299 PLEKHH1Q9ULM0 1364 aa14.67□□□□□ -0.06
DPPA4-206ENST00000487299 TECPR2O15040 1411 aa14.66□□□□□ -0.06
DPPA4-206ENST00000487299 MYOM2P54296 1465 aa14.66□□□□□ -0.06
DPPA4-206ENST00000487299 PXDNQ92626 1479 aa14.66□□□□□ -0.06
DPPA4-206ENST00000487299 QTRT2Q9H974 415 aaKnown RBP14.66□□□□□ -0.06
DPPA4-206ENST00000487299 ZBTB22O15209 634 aa14.65□□□□□ -0.06
DPPA4-206ENST00000487299 RBM6P78332 1123 aaKnown RBP14.65□□□□□ -0.06
DPPA4-206ENST00000487299 CCDC144AA2RUR9 1427 aa14.65□□□□□ -0.06
DPPA4-206ENST00000487299 RGL3Q3MIN7 710 aa14.64□□□□□ -0.07
DPPA4-206ENST00000487299 WAPLQ7Z5K2 1190 aa14.64□□□□□ -0.07
DPPA4-206ENST00000487299 PIK3C2GO75747 1445 aa14.64□□□□□ -0.07
DPPA4-206ENST00000487299 KNDC1Q76NI1 1749 aa14.63□□□□□ -0.07
DPPA4-206ENST00000487299 LRPPRCP42704 1394 aaKnown RBP14.63□□□□□ -0.07
DPPA4-206ENST00000487299 TMEM132EQ6IEE7 984 aa14.63□□□□□ -0.07
DPPA4-206ENST00000487299 MPHOSPH9Q99550 1183 aa14.63□□□□□ -0.07
DPPA4-206ENST00000487299 ATRNO75882 1429 aa14.62□□□□□ -0.07
DPPA4-206ENST00000487299 XPCQ01831 940 aaPredicted RBP14.62□□□□□ -0.07
DPPA4-206ENST00000487299 FNBP4Q8N3X1 1017 aaPredicted RBP14.62□□□□□ -0.07
DPPA4-206ENST00000487299 NGLY1Q96IV0 654 aa14.62□□□□□ -0.07
DPPA4-206ENST00000487299 STK26Q9P289 416 aa14.62□□□□□ -0.07
DPPA4-206ENST00000487299 ESCO1Q5FWF5 840 aa14.61□□□□□ -0.07
DPPA4-206ENST00000487299 ABCC11Q96J66 1382 aa14.6□□□□□ -0.07
DPPA4-206ENST00000487299 ANKRD30BQ9BXX2 1392 aa14.6□□□□□ -0.07
DPPA4-206ENST00000487299 NUTM2FA1L443 756 aa14.6□□□□□ -0.07
DPPA4-206ENST00000487299 USP21Q9UK80 565 aa14.6□□□□□ -0.07
DPPA4-206ENST00000487299 BCL9LQ86UU0 1499 aa14.6□□□□□ -0.07
DPPA4-206ENST00000487299 FMN2Q9NZ56 1722 aa14.6□□□□□ -0.07
DPPA4-206ENST00000487299 YTHDC2Q9H6S0 1430 aaKnown RBP14.59□□□□□ -0.07
DPPA4-206ENST00000487299 FOXO3O43524 673 aa14.59□□□□□ -0.07
DPPA4-206ENST00000487299 NPHP3Q7Z494 1330 aa14.59□□□□□ -0.07
DPPA4-206ENST00000487299 NRXN1Q9ULB1 1477 aa14.58□□□□□ -0.08
DPPA4-206ENST00000487299 ATXN8OSP0DMR3 200 aa14.58□□□□□ -0.08
DPPA4-206ENST00000487299 MARF1Q9Y4F3 1742 aaKnown RBP14.58□□□□□ -0.08
DPPA4-206ENST00000487299 TRPC5Q9UL62 973 aaPredicted RBP14.57□□□□□ -0.08
DPPA4-206ENST00000487299 SPDYE2BA6NHP3 402 aa14.55□□□□□ -0.08
DPPA4-206ENST00000487299 SPDYE6P0CI01 402 aa14.55□□□□□ -0.08
DPPA4-206ENST00000487299 SPDYE2Q495Y8 402 aa14.55□□□□□ -0.08
DPPA4-206ENST00000487299 CFAP70Q5T0N1 1121 aa14.54□□□□□ -0.08
DPPA4-206ENST00000487299 C14orf93Q9H972 538 aaKnown RBP14.54□□□□□ -0.08
DPPA4-206ENST00000487299 RGPD8O14715 1765 aaPredicted RBP14.54□□□□□ -0.08
DPPA4-206ENST00000487299 KIF1AQ12756 1690 aa14.53□□□□□ -0.08
DPPA4-206ENST00000487299 SLIT2O94813 1529 aa14.53□□□□□ -0.08
DPPA4-206ENST00000487299 ATAD2Q6PL18 1390 aa14.53□□□□□ -0.08
DPPA4-206ENST00000487299 SPATA31A3Q5VYP0 1347 aa14.53□□□□□ -0.08
DPPA4-206ENST00000487299 EVX2Q03828 476 aa14.53□□□□□ -0.08
DPPA4-206ENST00000487299 GLI3P10071 1580 aa14.52□□□□□ -0.08
DPPA4-206ENST00000487299 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.52□□□□□ -0.09
DPPA4-206ENST00000487299 USP32Q8NFA0 1604 aa14.52□□□□□ -0.09
DPPA4-206ENST00000487299 SIRT1Q96EB6 747 aa14.51□□□□□ -0.09
DPPA4-206ENST00000487299 ADGRB1O14514 1584 aa14.51□□□□□ -0.09
DPPA4-206ENST00000487299 RALGAPBQ86X10 1494 aa14.5□□□□□ -0.09
DPPA4-206ENST00000487299 RAB3GAP2Q9H2M9 1393 aa14.49□□□□□ -0.09
DPPA4-206ENST00000487299 KRT28Q7Z3Y7 464 aa14.49□□□□□ -0.09
DPPA4-206ENST00000487299 GJD4Q96KN9 370 aaPredicted RBP14.49□□□□□ -0.09
DPPA4-206ENST00000487299 ABCA3Q99758 1704 aa14.49□□□□□ -0.09
DPPA4-206ENST00000487299 TNS3Q68CZ2 1445 aa14.49□□□□□ -0.09
DPPA4-206ENST00000487299 DLC1Q96QB1 1528 aa14.48□□□□□ -0.09
DPPA4-206ENST00000487299 SAFB2Q14151 953 aaKnown RBP eCLIP14.48□□□□□ -0.09
DPPA4-206ENST00000487299 PRAM1Q96QH2 718 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms