RNA–Protein interactions for RNA: ENST00000487294.1

R3HDM1-218, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 587 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-218ENST00000487294 ADCY10Q96PN6 1610 aa9.06□□□□□ -0.96
R3HDM1-218ENST00000487294 GFRA3O60609 400 aa9.06□□□□□ -0.96
R3HDM1-218ENST00000487294 FAM69CQ0P6D2 419 aa9.06□□□□□ -0.96
R3HDM1-218ENST00000487294 PPP1R18Q6NYC8 613 aa9.06□□□□□ -0.96
R3HDM1-218ENST00000487294 IGF1RP08069 1367 aa9.05□□□□□ -0.96
R3HDM1-218ENST00000487294 SLC4A3P48751 1232 aa9.05□□□□□ -0.96
R3HDM1-218ENST00000487294 NRG2O14511 850 aaPredicted RBP9.04□□□□□ -0.96
R3HDM1-218ENST00000487294 SWT1Q5T5J6 900 aaKnown RBP9.04□□□□□ -0.96
R3HDM1-218ENST00000487294 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.04□□□□□ -0.96
R3HDM1-218ENST00000487294 RBM46Q8TBY0 533 aaKnown RBP9.03□□□□□ -0.96
R3HDM1-218ENST00000487294 PRR14Q9BWN1 585 aa9.03□□□□□ -0.96
R3HDM1-218ENST00000487294 KIF27Q86VH2 1401 aa9.03□□□□□ -0.96
R3HDM1-218ENST00000487294 CUL7Q14999 1698 aa9.03□□□□□ -0.96
R3HDM1-218ENST00000487294 GGCXP38435 758 aa9.02□□□□□ -0.97
R3HDM1-218ENST00000487294 PXYLP1Q8TE99 480 aa9.02□□□□□ -0.97
R3HDM1-218ENST00000487294 ZNF516Q92618 1163 aa9.02□□□□□ -0.97
R3HDM1-218ENST00000487294 TRAF7Q6Q0C0 670 aa9.01□□□□□ -0.97
R3HDM1-218ENST00000487294 KDM6BO15054 1643 aa9.01□□□□□ -0.97
R3HDM1-218ENST00000487294 RCCD1A6NED2 376 aa9□□□□□ -0.97
R3HDM1-218ENST00000487294 OATP04181 439 aa9□□□□□ -0.97
R3HDM1-218ENST00000487294 METTL3Q86U44 580 aaKnown RBP9□□□□□ -0.97
R3HDM1-218ENST00000487294 GLI2P10070 1586 aa8.99□□□□□ -0.97
R3HDM1-218ENST00000487294 LCE2BO14633 110 aa8.99□□□□□ -0.97
R3HDM1-218ENST00000487294 DNAJB2P25686 324 aa8.99□□□□□ -0.97
R3HDM1-218ENST00000487294 TMUB1Q9BVT8 246 aa8.99□□□□□ -0.97
R3HDM1-218ENST00000487294 ABCC2Q92887 1545 aa8.99□□□□□ -0.97
R3HDM1-218ENST00000487294 PTPRGP23470 1445 aa8.98□□□□□ -0.97
R3HDM1-218ENST00000487294 UHRF1BP1LA0JNW5 1464 aa8.98□□□□□ -0.97
R3HDM1-218ENST00000487294 COPS2P61201 443 aa8.98□□□□□ -0.97
R3HDM1-218ENST00000487294 ZC3H15Q8WU90 426 aaKnown RBP8.98□□□□□ -0.97
R3HDM1-218ENST00000487294 BCANQ96GW7 911 aa8.98□□□□□ -0.97
R3HDM1-218ENST00000487294 TMEM134Q9H6X4 195 aa8.98□□□□□ -0.97
R3HDM1-218ENST00000487294 TNIKQ9UKE5 1360 aa8.98□□□□□ -0.97
R3HDM1-218ENST00000487294 PLB1Q6P1J6 1458 aa8.97□□□□□ -0.97
R3HDM1-218ENST00000487294 MAP2K5Q13163 448 aa8.97□□□□□ -0.97
R3HDM1-218ENST00000487294 NKX2-3Q8TAU0 364 aa8.97□□□□□ -0.97
R3HDM1-218ENST00000487294 PHOX2BQ99453 314 aa8.97□□□□□ -0.97
R3HDM1-218ENST00000487294 CARMIL1Q5VZK9 1371 aa8.97□□□□□ -0.97
R3HDM1-218ENST00000487294 CARMIL2Q6F5E8 1435 aa8.97□□□□□ -0.97
R3HDM1-218ENST00000487294 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.96□□□□□ -0.98
R3HDM1-218ENST00000487294 IRF6O14896 467 aa8.96□□□□□ -0.98
R3HDM1-218ENST00000487294 ZPR1O75312 459 aa8.96□□□□□ -0.98
R3HDM1-218ENST00000487294 ZMYND10O75800 440 aa8.95□□□□□ -0.98
R3HDM1-218ENST00000487294 PCDHB3Q9Y5E6 796 aa8.95□□□□□ -0.98
R3HDM1-218ENST00000487294 PPRC1Q5VV67 1664 aaKnown RBP8.94□□□□□ -0.98
R3HDM1-218ENST00000487294 NLRP7Q8WX94 980 aa8.94□□□□□ -0.98
R3HDM1-218ENST00000487294 MINK1Q8N4C8 1332 aaPredicted RBP8.94□□□□□ -0.98
R3HDM1-218ENST00000487294 ASXL2Q76L83 1435 aa8.94□□□□□ -0.98
R3HDM1-218ENST00000487294 KDM5BQ9UGL1 1544 aa8.94□□□□□ -0.98
R3HDM1-218ENST00000487294 IQGAP2Q13576 1575 aa8.94□□□□□ -0.98
R3HDM1-218ENST00000487294 PDZRN3Q9UPQ7 1066 aa8.93□□□□□ -0.98
R3HDM1-218ENST00000487294 UACAQ9BZF9 1416 aa8.93□□□□□ -0.98
R3HDM1-218ENST00000487294 DISP1Q96F81 1524 aa8.93□□□□□ -0.98
R3HDM1-218ENST00000487294 TSPOAP1O95153 1857 aa8.93□□□□□ -0.98
R3HDM1-218ENST00000487294 BARGINQ6ZT62 677 aa8.92□□□□□ -0.98
R3HDM1-218ENST00000487294 UGGT2Q9NYU1 1516 aa8.91□□□□□ -0.98
R3HDM1-218ENST00000487294 CCDC102AQ96A19 550 aa8.91□□□□□ -0.98
R3HDM1-218ENST00000487294 MAP3K4Q9Y6R4 1608 aa8.91□□□□□ -0.98
R3HDM1-218ENST00000487294 EPRSP07814 1512 aaKnown RBP8.9□□□□□ -0.98
R3HDM1-218ENST00000487294 COL17A1Q9UMD9 1497 aaPredicted RBP8.9□□□□□ -0.98
R3HDM1-218ENST00000487294 KMT5BQ4FZB7 885 aa8.9□□□□□ -0.98
R3HDM1-218ENST00000487294 BLOC1S3Q6QNY0 202 aa8.9□□□□□ -0.98
R3HDM1-218ENST00000487294 SLC10A3P09131 477 aa8.89□□□□□ -0.99
R3HDM1-218ENST00000487294 KRI1Q8N9T8 703 aaKnown RBP8.89□□□□□ -0.99
R3HDM1-218ENST00000487294 DAXXQ9UER7 740 aaPredicted RBP8.89□□□□□ -0.99
R3HDM1-218ENST00000487294 TEX14Q8IWB6 1497 aa8.89□□□□□ -0.99
R3HDM1-218ENST00000487294 ACTN4O43707 911 aaKnown RBP8.88□□□□□ -0.99
R3HDM1-218ENST00000487294 ADGRL1O94910 1474 aa8.88□□□□□ -0.99
R3HDM1-218ENST00000487294 RNF223E7ERA6 249 aa8.87□□□□□ -0.99
R3HDM1-218ENST00000487294 RAPGEF2Q9Y4G8 1499 aa8.87□□□□□ -0.99
R3HDM1-218ENST00000487294 CFHP08603 1231 aa8.86□□□□□ -0.99
R3HDM1-218ENST00000487294 SLC19A1P41440 591 aa8.86□□□□□ -0.99
R3HDM1-218ENST00000487294 ANKLE1Q8NAG6 615 aa8.86□□□□□ -0.99
R3HDM1-218ENST00000487294 KIAA0556O60303 1618 aa8.85□□□□□ -0.99
R3HDM1-218ENST00000487294 ZCCHC11Q5TAX3 1644 aaKnown RBP8.85□□□□□ -0.99
R3HDM1-218ENST00000487294 TLL1O43897 1013 aa8.85□□□□□ -0.99
R3HDM1-218ENST00000487294 MAGI3Q5TCQ9 1506 aa8.85□□□□□ -0.99
R3HDM1-218ENST00000487294 WDR7Q9Y4E6 1490 aa8.84□□□□□ -0.99
R3HDM1-218ENST00000487294 DDX11L8A8MPP1 907 aa8.84□□□□□ -0.99
R3HDM1-218ENST00000487294 MDM2Q00987 491 aaPredicted RBP8.83□□□□□ -1
R3HDM1-218ENST00000487294 TRIM67Q6ZTA4 783 aa8.83□□□□□ -1
R3HDM1-218ENST00000487294 NR1I2O75469 434 aa8.82□□□□□ -1
R3HDM1-218ENST00000487294 ADH1BP00325 375 aa8.82□□□□□ -1
R3HDM1-218ENST00000487294 PRR20EP86478 221 aa8.82□□□□□ -1
R3HDM1-218ENST00000487294 PRR20CP86479 221 aa8.82□□□□□ -1
R3HDM1-218ENST00000487294 PRR20DP86480 221 aa8.82□□□□□ -1
R3HDM1-218ENST00000487294 PRR20BP86481 221 aa8.82□□□□□ -1
R3HDM1-218ENST00000487294 PRR20AP86496 221 aa8.82□□□□□ -1
R3HDM1-218ENST00000487294 SPRYD7Q5W111 196 aa8.82□□□□□ -1
R3HDM1-218ENST00000487294 ZNF787Q6DD87 383 aa8.82□□□□□ -1
R3HDM1-218ENST00000487294 EMID1Q96A84 441 aaPredicted RBP8.82□□□□□ -1
R3HDM1-218ENST00000487294 TTBK1Q5TCY1 1321 aaPredicted RBP8.81□□□□□ -1
R3HDM1-218ENST00000487294 S1PR4O95977 384 aa8.81□□□□□ -1
R3HDM1-218ENST00000487294 RSPH4AQ5TD94 716 aa8.81□□□□□ -1
R3HDM1-218ENST00000487294 ZNF598Q86UK7 904 aaKnown RBP8.81□□□□□ -1
R3HDM1-218ENST00000487294 SULF1Q8IWU6 871 aa8.81□□□□□ -1
R3HDM1-218ENST00000487294 RDH13Q8NBN7 331 aa8.81□□□□□ -1
R3HDM1-218ENST00000487294 REPIN1Q9BWE0 567 aaKnown RBP8.81□□□□□ -1
R3HDM1-218ENST00000487294 GOLGA3Q08378 1498 aa8.81□□□□□ -1
R3HDM1-218ENST00000487294 ABCA8O94911 1581 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms