RNA–Protein interactions for RNA: ENST00000487241.1

TRIM5-210, Transcript of tripartite motif containing 5, human

TSL 1 (best)

Gene TRIM5, Length 756 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRIM5-210	ENST00000487241	NCOA3	Q9Y6Q9	1424 aa		11.76	□□□□□ -0.53
TRIM5-210	ENST00000487241	NRXN3	Q9Y4C0	1643 aa		11.75	□□□□□ -0.53
TRIM5-210	ENST00000487241	NEXMIF	Q5QGS0	1516 aa		11.75	□□□□□ -0.53
TRIM5-210	ENST00000487241	SETBP1	Q9Y6X0	1596 aa		11.75	□□□□□ -0.53
TRIM5-210	ENST00000487241	RTN4	Q9NQC3	1192 aa	Known RBP	11.74	□□□□□ -0.53
TRIM5-210	ENST00000487241	RXRB	P28702	533 aa		11.73	□□□□□ -0.53
TRIM5-210	ENST00000487241	AKT1S1	Q96B36	256 aa		11.73	□□□□□ -0.53
TRIM5-210	ENST00000487241	PTPRU	Q92729	1446 aa		11.72	□□□□□ -0.53
TRIM5-210	ENST00000487241	BRINP3	Q76B58	766 aa		11.72	□□□□□ -0.53
TRIM5-210	ENST00000487241	AMER1	Q5JTC6	1135 aa	Predicted RBP	11.71	□□□□□ -0.53
TRIM5-210	ENST00000487241	XRN1	Q8IZH2	1706 aa	Known RBP	11.71	□□□□□ -0.54
TRIM5-210	ENST00000487241	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	11.71	□□□□□ -0.54
TRIM5-210	ENST00000487241	MET	P08581	1390 aa		11.7	□□□□□ -0.54
TRIM5-210	ENST00000487241	VGF	O15240	615 aa	Predicted RBP	11.7	□□□□□ -0.54
TRIM5-210	ENST00000487241	LRRC59	Q96AG4	307 aa	Known RBP	11.7	□□□□□ -0.54
TRIM5-210	ENST00000487241	RPGRIP1L	Q68CZ1	1315 aa		11.69	□□□□□ -0.54
TRIM5-210	ENST00000487241	MPHOSPH9	Q99550	1183 aa		11.69	□□□□□ -0.54
TRIM5-210	ENST00000487241	CCDC144A	A2RUR9	1427 aa		11.69	□□□□□ -0.54
TRIM5-210	ENST00000487241	LRP6	O75581	1613 aa		11.68	□□□□□ -0.54
TRIM5-210	ENST00000487241	COL16A1	Q07092	1604 aa	Predicted RBP	11.68	□□□□□ -0.54
TRIM5-210	ENST00000487241	AFF2	P51816	1311 aa		11.68	□□□□□ -0.54
TRIM5-210	ENST00000487241	C8orf37	Q96NL8	207 aa		11.68	□□□□□ -0.54
TRIM5-210	ENST00000487241	PPL	O60437	1756 aa		11.68	□□□□□ -0.54
TRIM5-210	ENST00000487241	ACIN1	Q9UKV3	1341 aa	Known RBP	11.67	□□□□□ -0.54
TRIM5-210	ENST00000487241	DDX17	Q92841	729 aa	Known RBP	11.67	□□□□□ -0.54
TRIM5-210	ENST00000487241	SETD5	Q9C0A6	1442 aa		11.67	□□□□□ -0.54
TRIM5-210	ENST00000487241	IFNLR1	Q8IU57	520 aa	Predicted RBP	11.66	□□□□□ -0.54
TRIM5-210	ENST00000487241	NGLY1	Q96IV0	654 aa		11.66	□□□□□ -0.54
TRIM5-210	ENST00000487241	QTRT2	Q9H974	415 aa	Known RBP	11.66	□□□□□ -0.54
TRIM5-210	ENST00000487241	DCC	P43146	1447 aa		11.66	□□□□□ -0.54
TRIM5-210	ENST00000487241	AHDC1	Q5TGY3	1603 aa	Predicted RBP	11.65	□□□□□ -0.54
TRIM5-210	ENST00000487241	ADAMTS2	O95450	1211 aa		11.65	□□□□□ -0.54
TRIM5-210	ENST00000487241	RGL3	Q3MIN7	710 aa		11.64	□□□□□ -0.55
TRIM5-210	ENST00000487241	REM2	Q8IYK8	340 aa	Predicted RBP	11.64	□□□□□ -0.55
TRIM5-210	ENST00000487241	NALCN	Q8IZF0	1738 aa		11.63	□□□□□ -0.55
TRIM5-210	ENST00000487241	ADGRL3	Q9HAR2	1447 aa		11.63	□□□□□ -0.55
TRIM5-210	ENST00000487241	RBM6	P78332	1123 aa	Known RBP	11.63	□□□□□ -0.55
TRIM5-210	ENST00000487241	RAB3GAP2	Q9H2M9	1393 aa		11.63	□□□□□ -0.55
TRIM5-210	ENST00000487241	MST1R	Q04912	1400 aa		11.62	□□□□□ -0.55
TRIM5-210	ENST00000487241	PTCH1	Q13635	1447 aa		11.62	□□□□□ -0.55
TRIM5-210	ENST00000487241	SPATA31E1	Q6ZUB1	1445 aa		11.62	□□□□□ -0.55
TRIM5-210	ENST00000487241	ASXL1	Q8IXJ9	1541 aa		11.62	□□□□□ -0.55
TRIM5-210	ENST00000487241	ZRANB1	Q9UGI0	708 aa		11.62	□□□□□ -0.55
TRIM5-210	ENST00000487241	IFT172	Q9UG01	1749 aa		11.62	□□□□□ -0.55
TRIM5-210	ENST00000487241	SHPRH	Q149N8	1683 aa		11.62	□□□□□ -0.55
TRIM5-210	ENST00000487241	ANKRD30B	Q9BXX2	1392 aa		11.61	□□□□□ -0.55
TRIM5-210	ENST00000487241	ROBO2	Q9HCK4	1378 aa		11.61	□□□□□ -0.55
TRIM5-210	ENST00000487241	CDK12	Q9NYV4	1490 aa	Predicted RBP	11.61	□□□□□ -0.55
TRIM5-210	ENST00000487241	ADGRF5	Q8IZF2	1346 aa		11.6	□□□□□ -0.55
TRIM5-210	ENST00000487241	SPDYE1	Q8NFV5	336 aa	Predicted RBP	11.6	□□□□□ -0.55
TRIM5-210	ENST00000487241	PRAG1	Q86YV5	1406 aa		11.6	□□□□□ -0.55
TRIM5-210	ENST00000487241	PNPLA6	Q8IY17	1366 aa		11.59	□□□□□ -0.55
TRIM5-210	ENST00000487241	MIER1	Q8N108	512 aa		11.59	□□□□□ -0.55
TRIM5-210	ENST00000487241	ORAI2	Q96SN7	254 aa		11.59	□□□□□ -0.55
TRIM5-210	ENST00000487241	USP21	Q9UK80	565 aa		11.59	□□□□□ -0.55
TRIM5-210	ENST00000487241	NHSL1	Q5SYE7	1610 aa		11.58	□□□□□ -0.56
TRIM5-210	ENST00000487241	ESCO1	Q5FWF5	840 aa		11.57	□□□□□ -0.56
TRIM5-210	ENST00000487241	PLCD3	Q8N3E9	789 aa		11.57	□□□□□ -0.56
TRIM5-210	ENST00000487241	PCGF6	Q9BYE7	350 aa		11.57	□□□□□ -0.56
TRIM5-210	ENST00000487241	PIK3C2G	O75747	1445 aa		11.57	□□□□□ -0.56
TRIM5-210	ENST00000487241	C1orf167	Q5SNV9	1468 aa		11.57	□□□□□ -0.56
TRIM5-210	ENST00000487241	RGS12	O14924	1447 aa		11.56	□□□□□ -0.56
TRIM5-210	ENST00000487241	STK26	Q9P289	416 aa		11.56	□□□□□ -0.56
TRIM5-210	ENST00000487241	TRPC5	Q9UL62	973 aa	Predicted RBP	11.56	□□□□□ -0.56
TRIM5-210	ENST00000487241	CLEC11A	Q9Y240	323 aa		11.56	□□□□□ -0.56
TRIM5-210	ENST00000487241	TMEM132E	Q6IEE7	984 aa		11.55	□□□□□ -0.56
TRIM5-210	ENST00000487241	KNDC1	Q76NI1	1749 aa		11.55	□□□□□ -0.56
TRIM5-210	ENST00000487241	LRPPRC	P42704	1394 aa	Known RBP	11.54	□□□□□ -0.56
TRIM5-210	ENST00000487241	TECPR2	O15040	1411 aa		11.54	□□□□□ -0.56
TRIM5-210	ENST00000487241	KLHL34	Q8N239	644 aa		11.54	□□□□□ -0.56
TRIM5-210	ENST00000487241	MYOM2	P54296	1465 aa		11.54	□□□□□ -0.56
TRIM5-210	ENST00000487241	SOS2	Q07890	1332 aa	Predicted RBP	11.54	□□□□□ -0.56
TRIM5-210	ENST00000487241	CDC42BPG	Q6DT37	1551 aa		11.54	□□□□□ -0.56
TRIM5-210	ENST00000487241	LAMC1	P11047	1609 aa		11.53	□□□□□ -0.56
TRIM5-210	ENST00000487241	NUTM2F	A1L443	756 aa		11.53	□□□□□ -0.56
TRIM5-210	ENST00000487241	HRC	P23327	699 aa		11.53	□□□□□ -0.56
TRIM5-210	ENST00000487241	XPC	Q01831	940 aa	Predicted RBP	11.53	□□□□□ -0.56
TRIM5-210	ENST00000487241	NPHP3	Q7Z494	1330 aa		11.53	□□□□□ -0.56
TRIM5-210	ENST00000487241	ATAD2	Q6PL18	1390 aa		11.53	□□□□□ -0.56
TRIM5-210	ENST00000487241	ABCC11	Q96J66	1382 aa		11.53	□□□□□ -0.56
TRIM5-210	ENST00000487241	YTHDC2	Q9H6S0	1430 aa	Known RBP	11.52	□□□□□ -0.56
TRIM5-210	ENST00000487241	NRXN1	Q9ULB1	1477 aa		11.52	□□□□□ -0.56
TRIM5-210	ENST00000487241	FOXO3	O43524	673 aa		11.52	□□□□□ -0.57
TRIM5-210	ENST00000487241	TRIM26	Q12899	539 aa	Predicted RBP	11.52	□□□□□ -0.57
TRIM5-210	ENST00000487241	WAPL	Q7Z5K2	1190 aa		11.52	□□□□□ -0.57
TRIM5-210	ENST00000487241	C14orf93	Q9H972	538 aa	Known RBP	11.52	□□□□□ -0.57
TRIM5-210	ENST00000487241	CFAP70	Q5T0N1	1121 aa		11.51	□□□□□ -0.57
TRIM5-210	ENST00000487241	FNBP4	Q8N3X1	1017 aa	Predicted RBP	11.51	□□□□□ -0.57
TRIM5-210	ENST00000487241	DHX57	Q6P158	1386 aa	Known RBP	11.51	□□□□□ -0.57
TRIM5-210	ENST00000487241	PLEKHH1	Q9ULM0	1364 aa		11.51	□□□□□ -0.57
TRIM5-210	ENST00000487241	HAP1	P54257	671 aa	Predicted RBP	11.5	□□□□□ -0.57
TRIM5-210	ENST00000487241	PITPNM1	O00562	1244 aa		11.49	□□□□□ -0.57
TRIM5-210	ENST00000487241	PLEKHG5	O94827	1062 aa		11.49	□□□□□ -0.57
TRIM5-210	ENST00000487241	PRR29	P0C7W0	189 aa		11.49	□□□□□ -0.57
TRIM5-210	ENST00000487241	IFFO2	Q5TF58	517 aa		11.49	□□□□□ -0.57
TRIM5-210	ENST00000487241	DCAF11	Q8TEB1	546 aa		11.48	□□□□□ -0.57
TRIM5-210	ENST00000487241	SIRT1	Q96EB6	747 aa		11.48	□□□□□ -0.57
TRIM5-210	ENST00000487241	KDM2A	Q9Y2K7	1162 aa		11.48	□□□□□ -0.57
TRIM5-210	ENST00000487241	FMN2	Q9NZ56	1722 aa		11.47	□□□□□ -0.57
TRIM5-210	ENST00000487241	CCDC125	Q86Z20	511 aa		11.47	□□□□□ -0.57

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