RNA–Protein interactions for RNA: ENST00000487239.5

CAD-209, Transcript of carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase, humanhuman

TSL 3

Gene CAD, Length 748 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Exosome, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAD-209ENST00000487239 NHSL1Q5SYE7 1610 aa20.6■□□□□ 0.89
CAD-209ENST00000487239 PRAG1Q86YV5 1406 aa20.59■□□□□ 0.89
CAD-209ENST00000487239 FOXO3O43524 673 aa20.58■□□□□ 0.89
CAD-209ENST00000487239 XPCQ01831 940 aaPredicted RBP20.58■□□□□ 0.89
CAD-209ENST00000487239 UPF1Q92900 1129 aaKnown RBP eCLIP20.58■□□□□ 0.89
CAD-209ENST00000487239 SETD1AO15047 1707 aaKnown RBP20.58■□□□□ 0.88
CAD-209ENST00000487239 ACIN1Q9UKV3 1341 aaKnown RBP20.57■□□□□ 0.88
CAD-209ENST00000487239 LRPPRCP42704 1394 aaKnown RBP20.57■□□□□ 0.88
CAD-209ENST00000487239 PPLO60437 1756 aa20.57■□□□□ 0.88
CAD-209ENST00000487239 NPHP3Q7Z494 1330 aa20.56■□□□□ 0.88
CAD-209ENST00000487239 RBM6P78332 1123 aaKnown RBP20.55■□□□□ 0.88
CAD-209ENST00000487239 ABCC11Q96J66 1382 aa20.55■□□□□ 0.88
CAD-209ENST00000487239 PLEKHH1Q9ULM0 1364 aa20.55■□□□□ 0.88
CAD-209ENST00000487239 CFAP70Q5T0N1 1121 aa20.53■□□□□ 0.88
CAD-209ENST00000487239 USP21Q9UK80 565 aa20.53■□□□□ 0.88
CAD-209ENST00000487239 PIK3C2GO75747 1445 aa20.53■□□□□ 0.88
CAD-209ENST00000487239 C14orf93Q9H972 538 aaKnown RBP20.52■□□□□ 0.88
CAD-209ENST00000487239 TECPR2O15040 1411 aa20.52■□□□□ 0.87
CAD-209ENST00000487239 YTHDC2Q9H6S0 1430 aaKnown RBP20.51■□□□□ 0.87
CAD-209ENST00000487239 RAB3GAP2Q9H2M9 1393 aa20.5■□□□□ 0.87
CAD-209ENST00000487239 SAFB2Q14151 953 aaKnown RBP eCLIP20.49■□□□□ 0.87
CAD-209ENST00000487239 CDK12Q9NYV4 1490 aaPredicted RBP20.49■□□□□ 0.87
CAD-209ENST00000487239 CDC42BPGQ6DT37 1551 aa20.48■□□□□ 0.87
CAD-209ENST00000487239 FNBP4Q8N3X1 1017 aaPredicted RBP20.48■□□□□ 0.87
CAD-209ENST00000487239 TRPC5Q9UL62 973 aaPredicted RBP20.48■□□□□ 0.87
CAD-209ENST00000487239 DHX57Q6P158 1386 aaKnown RBP20.47■□□□□ 0.87
CAD-209ENST00000487239 SIRT1Q96EB6 747 aa20.47■□□□□ 0.87
CAD-209ENST00000487239 PRAM1Q96QH2 718 aa20.46■□□□□ 0.87
CAD-209ENST00000487239 LAMC1P11047 1609 aa20.45■□□□□ 0.87
CAD-209ENST00000487239 RGS12O14924 1447 aa20.45■□□□□ 0.86
CAD-209ENST00000487239 KRT28Q7Z3Y7 464 aa20.45■□□□□ 0.86
CAD-209ENST00000487239 POGKQ9P215 609 aa20.45■□□□□ 0.86
CAD-209ENST00000487239 PXDNQ92626 1479 aa20.44■□□□□ 0.86
CAD-209ENST00000487239 PLEKHG5O94827 1062 aa20.44■□□□□ 0.86
CAD-209ENST00000487239 KDM2AQ9Y2K7 1162 aa20.44■□□□□ 0.86
CAD-209ENST00000487239 PHF8Q9UPP1 1060 aa20.42■□□□□ 0.86
CAD-209ENST00000487239 DCAF11Q8TEB1 546 aa20.41■□□□□ 0.86
CAD-209ENST00000487239 SPATA31A3Q5VYP0 1347 aa20.41■□□□□ 0.86
CAD-209ENST00000487239 MYOM2P54296 1465 aa20.41■□□□□ 0.86
CAD-209ENST00000487239 HAP1P54257 671 aaPredicted RBP20.4■□□□□ 0.86
CAD-209ENST00000487239 PSME1Q06323 249 aa20.4■□□□□ 0.86
CAD-209ENST00000487239 LMOD2Q6P5Q4 547 aa20.4■□□□□ 0.86
CAD-209ENST00000487239 NRXN1Q9ULB1 1477 aa20.4■□□□□ 0.86
CAD-209ENST00000487239 TRAK1Q9UPV9 953 aa20.4■□□□□ 0.86
CAD-209ENST00000487239 IFT172Q9UG01 1749 aa20.39■□□□□ 0.86
CAD-209ENST00000487239 HIRIP3Q9BW71 556 aaPredicted RBP20.38■□□□□ 0.85
CAD-209ENST00000487239 PMFBP1Q8TBY8 1022 aa20.37■□□□□ 0.85
CAD-209ENST00000487239 ATRNO75882 1429 aa20.36■□□□□ 0.85
CAD-209ENST00000487239 CABLES1Q8TDN4 633 aa20.36■□□□□ 0.85
CAD-209ENST00000487239 GJD4Q96KN9 370 aaPredicted RBP20.36■□□□□ 0.85
CAD-209ENST00000487239 BCL9LQ86UU0 1499 aa20.36■□□□□ 0.85
CAD-209ENST00000487239 ATAD2Q6PL18 1390 aa20.35■□□□□ 0.85
CAD-209ENST00000487239 COL22A1Q8NFW1 1626 aaPredicted RBP20.35■□□□□ 0.85
CAD-209ENST00000487239 MINK1Q8N4C8 1332 aaPredicted RBP20.34■□□□□ 0.85
CAD-209ENST00000487239 KNDC1Q76NI1 1749 aa20.34■□□□□ 0.85
CAD-209ENST00000487239 UNC5CLQ8IV45 518 aa20.34■□□□□ 0.85
CAD-209ENST00000487239 FMN2Q9NZ56 1722 aa20.31■□□□□ 0.84
CAD-209ENST00000487239 HRCP23327 699 aa20.31■□□□□ 0.84
CAD-209ENST00000487239 TNS3Q68CZ2 1445 aa20.3■□□□□ 0.84
CAD-209ENST00000487239 STAC3Q96MF2 364 aa20.29■□□□□ 0.84
CAD-209ENST00000487239 CCDC9Q9Y3X0 531 aaKnown RBP20.28■□□□□ 0.84
CAD-209ENST00000487239 SBNO1A3KN83 1393 aa20.28■□□□□ 0.84
CAD-209ENST00000487239 DLC1Q96QB1 1528 aa20.27■□□□□ 0.84
CAD-209ENST00000487239 KIF1AQ12756 1690 aa20.27■□□□□ 0.84
CAD-209ENST00000487239 WASLO00401 505 aaPredicted RBP20.27■□□□□ 0.84
CAD-209ENST00000487239 ADGRB1O14514 1584 aa20.26■□□□□ 0.83
CAD-209ENST00000487239 ARHGEF10O15013 1369 aa20.26■□□□□ 0.83
CAD-209ENST00000487239 ANKARQ7Z5J8 1434 aa20.26■□□□□ 0.83
CAD-209ENST00000487239 GPRASP1Q5JY77 1395 aa20.25■□□□□ 0.83
CAD-209ENST00000487239 NGDNQ8NEJ9 315 aaKnown RBP20.25■□□□□ 0.83
CAD-209ENST00000487239 SLIT2O94813 1529 aa20.25■□□□□ 0.83
CAD-209ENST00000487239 PRR36Q9H6K5 1346 aa20.25■□□□□ 0.83
CAD-209ENST00000487239 FAM83GA6ND36 823 aa20.24■□□□□ 0.83
CAD-209ENST00000487239 PAK3O75914 559 aaPredicted RBP20.24■□□□□ 0.83
CAD-209ENST00000487239 RALGAPBQ86X10 1494 aa20.24■□□□□ 0.83
CAD-209ENST00000487239 VPS72Q15906 364 aa20.23■□□□□ 0.83
CAD-209ENST00000487239 EIF3AQ14152 1382 aaKnown RBP20.22■□□□□ 0.83
CAD-209ENST00000487239 SRCAPQ6ZRS2 3230 aa20.22■□□□□ 0.83
CAD-209ENST00000487239 CCDC125Q86Z20 511 aa20.22■□□□□ 0.83
CAD-209ENST00000487239 SEPT12Q8IYM1 358 aa20.22■□□□□ 0.83
CAD-209ENST00000487239 EP400Q96L91 3159 aa20.21■□□□□ 0.83
CAD-209ENST00000487239 A0A0G2JS52 829 aa20.19■□□□□ 0.82
CAD-209ENST00000487239 MYT1Q01538 1121 aa20.19■□□□□ 0.82
CAD-209ENST00000487239 NUDT16Q96DE0 195 aaKnown RBP20.19■□□□□ 0.82
CAD-209ENST00000487239 USP32Q8NFA0 1604 aa20.19■□□□□ 0.82
CAD-209ENST00000487239 BTG4Q9NY30 223 aa20.18■□□□□ 0.82
CAD-209ENST00000487239 ZRANB1Q9UGI0 708 aa20.18■□□□□ 0.82
CAD-209ENST00000487239 RGPD8O14715 1765 aaPredicted RBP20.18■□□□□ 0.82
CAD-209ENST00000487239 CDK19Q9BWU1 502 aa20.17■□□□□ 0.82
CAD-209ENST00000487239 ADGRB2O60241 1585 aa20.17■□□□□ 0.82
CAD-209ENST00000487239 TULP4Q9NRJ4 1543 aa20.16■□□□□ 0.82
CAD-209ENST00000487239 MARF1Q9Y4F3 1742 aaKnown RBP20.16■□□□□ 0.82
CAD-209ENST00000487239 GLI3P10071 1580 aa20.15■□□□□ 0.82
CAD-209ENST00000487239 ONECUT3O60422 494 aaPredicted RBP20.14■□□□□ 0.81
CAD-209ENST00000487239 SF3B2Q13435 895 aaKnown RBP20.14■□□□□ 0.81
CAD-209ENST00000487239 NBPF1Q3BBV0 1214 aa20.14■□□□□ 0.81
CAD-209ENST00000487239 KRT27Q7Z3Y8 459 aa20.14■□□□□ 0.81
CAD-209ENST00000487239 FAM98CQ17RN3 349 aaKnown RBP20.13■□□□□ 0.81
CAD-209ENST00000487239 NUTM2GQ5VZR2 741 aa20.12■□□□□ 0.81
CAD-209ENST00000487239 PRDM11Q9NQV5 511 aa20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms