RNA–Protein interactions for RNA: ENST00000486964.5

POLR1A-208, Transcript of RNA polymerase I subunit A, humanhuman

TSL 5

Gene POLR1A, Length 1,427 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1A-208ENST00000486964 PANK3Q9H999 370 aa13.05□□□□□ -0.32
POLR1A-208ENST00000486964 SETD1AO15047 1707 aaKnown RBP13.04□□□□□ -0.32
POLR1A-208ENST00000486964 PPP4R3CPQ6ZMV5 832 aa13.04□□□□□ -0.32
POLR1A-208ENST00000486964 TBX22Q9Y458 520 aa13.04□□□□□ -0.32
POLR1A-208ENST00000486964 TECPR2O15040 1411 aa13.03□□□□□ -0.32
POLR1A-208ENST00000486964 STK26Q9P289 416 aa13.03□□□□□ -0.32
POLR1A-208ENST00000486964 EID1Q9Y6B2 187 aa13.03□□□□□ -0.32
POLR1A-208ENST00000486964 ILDR2Q71H61 639 aa13.01□□□□□ -0.33
POLR1A-208ENST00000486964 PRAM1Q96QH2 718 aa13.01□□□□□ -0.33
POLR1A-208ENST00000486964 KTN1Q86UP2 1357 aaKnown RBP13.01□□□□□ -0.33
POLR1A-208ENST00000486964 ARHGEF28Q8N1W1 1705 aaKnown RBP13.01□□□□□ -0.33
POLR1A-208ENST00000486964 CEP170BQ9Y4F5 1589 aaPredicted RBP13□□□□□ -0.33
POLR1A-208ENST00000486964 FAM135BQ49AJ0 1406 aa13□□□□□ -0.33
POLR1A-208ENST00000486964 EVC2Q86UK5 1308 aa13□□□□□ -0.33
POLR1A-208ENST00000486964 SOCS7O14512 581 aa13□□□□□ -0.33
POLR1A-208ENST00000486964 RALBP1Q15311 655 aa12.99□□□□□ -0.33
POLR1A-208ENST00000486964 TULP4Q9NRJ4 1543 aa12.99□□□□□ -0.33
POLR1A-208ENST00000486964 NPC1L1Q9UHC9 1359 aa12.98□□□□□ -0.33
POLR1A-208ENST00000486964 HNRNPUQ00839 825 aaKnown RBP eCLIP12.98□□□□□ -0.33
POLR1A-208ENST00000486964 AMER1Q5JTC6 1135 aaPredicted RBP12.98□□□□□ -0.33
POLR1A-208ENST00000486964 ANP32EQ9BTT0 268 aa12.98□□□□□ -0.33
POLR1A-208ENST00000486964 CARD14Q9BXL6 1004 aa12.98□□□□□ -0.33
POLR1A-208ENST00000486964 PARD3Q8TEW0 1356 aa12.98□□□□□ -0.33
POLR1A-208ENST00000486964 CCDC184Q52MB2 194 aa12.97□□□□□ -0.33
POLR1A-208ENST00000486964 WAPLQ7Z5K2 1190 aa12.97□□□□□ -0.33
POLR1A-208ENST00000486964 BCANQ96GW7 911 aa12.97□□□□□ -0.33
POLR1A-208ENST00000486964 POGKQ9P215 609 aa12.97□□□□□ -0.33
POLR1A-208ENST00000486964 PTPRUQ92729 1446 aa12.97□□□□□ -0.33
POLR1A-208ENST00000486964 PLEKHH1Q9ULM0 1364 aa12.97□□□□□ -0.33
POLR1A-208ENST00000486964 QRICH2Q9H0J4 1663 aa12.97□□□□□ -0.33
POLR1A-208ENST00000486964 ANKLE2Q86XL3 938 aa12.96□□□□□ -0.33
POLR1A-208ENST00000486964 DMRT2Q9Y5R5 561 aa12.96□□□□□ -0.33
POLR1A-208ENST00000486964 ZNF142P52746 1687 aaPredicted RBP12.96□□□□□ -0.33
POLR1A-208ENST00000486964 SLC26A8Q96RN1 970 aa12.96□□□□□ -0.34
POLR1A-208ENST00000486964 PIK3R4Q99570 1358 aa12.95□□□□□ -0.34
POLR1A-208ENST00000486964 MYOM1P52179 1685 aa12.95□□□□□ -0.34
POLR1A-208ENST00000486964 SLC12A5Q9H2X9 1139 aa12.95□□□□□ -0.34
POLR1A-208ENST00000486964 ROBO2Q9HCK4 1378 aa12.94□□□□□ -0.34
POLR1A-208ENST00000486964 CPS1P31327 1500 aa12.94□□□□□ -0.34
POLR1A-208ENST00000486964 MINK1Q8N4C8 1332 aaPredicted RBP12.94□□□□□ -0.34
POLR1A-208ENST00000486964 SAFB2Q14151 953 aaKnown RBP eCLIP12.94□□□□□ -0.34
POLR1A-208ENST00000486964 CDK19Q9BWU1 502 aa12.94□□□□□ -0.34
POLR1A-208ENST00000486964 CABP2Q9NPB3 220 aa12.94□□□□□ -0.34
POLR1A-208ENST00000486964 NINLQ9Y2I6 1382 aa12.93□□□□□ -0.34
POLR1A-208ENST00000486964 ZBED9Q6R2W3 1325 aa12.93□□□□□ -0.34
POLR1A-208ENST00000486964 MYBBP1AQ9BQG0 1328 aaKnown RBP12.93□□□□□ -0.34
POLR1A-208ENST00000486964 LTBP4Q8N2S1 1624 aa12.93□□□□□ -0.34
POLR1A-208ENST00000486964 DIP2AQ14689 1571 aa12.93□□□□□ -0.34
POLR1A-208ENST00000486964 KNSTRNQ9Y448 316 aa12.93□□□□□ -0.34
POLR1A-208ENST00000486964 KNDC1Q76NI1 1749 aa12.92□□□□□ -0.34
POLR1A-208ENST00000486964 AMOTL2Q9Y2J4 779 aa12.92□□□□□ -0.34
POLR1A-208ENST00000486964 ATAD2Q6PL18 1390 aa12.92□□□□□ -0.34
POLR1A-208ENST00000486964 IQSEC2Q5JU85 1478 aa12.92□□□□□ -0.34
POLR1A-208ENST00000486964 WASLO00401 505 aaPredicted RBP12.91□□□□□ -0.34
POLR1A-208ENST00000486964 BRD4O60885 1362 aaPredicted RBP12.91□□□□□ -0.34
POLR1A-208ENST00000486964 ANKRD36BQ8N2N9 1353 aa12.9□□□□□ -0.34
POLR1A-208ENST00000486964 PTCH1Q13635 1447 aa12.9□□□□□ -0.34
POLR1A-208ENST00000486964 PNISRQ8TF01 805 aaKnown RBP12.89□□□□□ -0.35
POLR1A-208ENST00000486964 MRS2Q9HD23 443 aa12.89□□□□□ -0.35
POLR1A-208ENST00000486964 CD163L1Q9NR16 1453 aa12.89□□□□□ -0.35
POLR1A-208ENST00000486964 SRPK2P78362 688 aaKnown RBP12.88□□□□□ -0.35
POLR1A-208ENST00000486964 CC2D1BQ5T0F9 858 aaKnown RBP12.88□□□□□ -0.35
POLR1A-208ENST00000486964 NLRP13Q86W25 1043 aa12.88□□□□□ -0.35
POLR1A-208ENST00000486964 TMC1Q8TDI8 760 aa12.88□□□□□ -0.35
POLR1A-208ENST00000486964 RBM19Q9Y4C8 960 aaKnown RBP12.88□□□□□ -0.35
POLR1A-208ENST00000486964 PPP4R2Q9NY27 417 aa12.88□□□□□ -0.35
POLR1A-208ENST00000486964 NPHP4O75161 1426 aaPredicted RBP12.86□□□□□ -0.35
POLR1A-208ENST00000486964 FANCIQ9NVI1 1328 aa12.86□□□□□ -0.35
POLR1A-208ENST00000486964 KCNA6P17658 529 aa12.86□□□□□ -0.35
POLR1A-208ENST00000486964 PPP2R1AP30153 589 aa12.86□□□□□ -0.35
POLR1A-208ENST00000486964 CABP1Q9NZU7 370 aa12.86□□□□□ -0.35
POLR1A-208ENST00000486964 NCKAP5LQ9HCH0 1330 aa12.85□□□□□ -0.35
POLR1A-208ENST00000486964 XRN1Q8IZH2 1706 aaKnown RBP12.85□□□□□ -0.35
POLR1A-208ENST00000486964 ADGRB2O60241 1585 aa12.85□□□□□ -0.35
POLR1A-208ENST00000486964 NSD3Q9BZ95 1437 aa12.85□□□□□ -0.35
POLR1A-208ENST00000486964 NUDT16Q96DE0 195 aaKnown RBP12.85□□□□□ -0.35
POLR1A-208ENST00000486964 CCDC61Q9Y6R9 512 aa12.85□□□□□ -0.35
POLR1A-208ENST00000486964 A0A1W2PP64 1363 aa12.84□□□□□ -0.35
POLR1A-208ENST00000486964 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.84□□□□□ -0.35
POLR1A-208ENST00000486964 CPSF1Q10570 1443 aaKnown RBP12.84□□□□□ -0.35
POLR1A-208ENST00000486964 NCBP3Q53F19 620 aaKnown RBP12.84□□□□□ -0.35
POLR1A-208ENST00000486964 TERF2IPQ9NYB0 399 aa12.84□□□□□ -0.35
POLR1A-208ENST00000486964 PRR36Q9H6K5 1346 aa12.84□□□□□ -0.35
POLR1A-208ENST00000486964 PLEKHG3A1L390 1219 aa12.83□□□□□ -0.36
POLR1A-208ENST00000486964 CNGB1Q14028 1251 aaPredicted RBP12.83□□□□□ -0.36
POLR1A-208ENST00000486964 NSD2O96028 1365 aa12.83□□□□□ -0.36
POLR1A-208ENST00000486964 USP32Q8NFA0 1604 aa12.83□□□□□ -0.36
POLR1A-208ENST00000486964 SMG6Q86US8 1419 aaKnown RBP12.82□□□□□ -0.36
POLR1A-208ENST00000486964 CGNL1Q0VF96 1302 aa12.82□□□□□ -0.36
POLR1A-208ENST00000486964 INSRP06213 1382 aa12.82□□□□□ -0.36
POLR1A-208ENST00000486964 ATP7BP35670 1465 aa12.82□□□□□ -0.36
POLR1A-208ENST00000486964 FYB1O15117 783 aa12.8□□□□□ -0.36
POLR1A-208ENST00000486964 HDGFL2Q7Z4V5 671 aaPredicted RBP12.8□□□□□ -0.36
POLR1A-208ENST00000486964 FAM9BQ8IZU0 186 aa12.8□□□□□ -0.36
POLR1A-208ENST00000486964 ZNF692Q9BU19 519 aaPredicted RBP12.79□□□□□ -0.36
POLR1A-208ENST00000486964 PPIP5K1Q6PFW1 1433 aa12.79□□□□□ -0.36
POLR1A-208ENST00000486964 CHD2O14647 1828 aaKnown RBP12.79□□□□□ -0.36
POLR1A-208ENST00000486964 MORC1Q86VD1 984 aa12.78□□□□□ -0.36
POLR1A-208ENST00000486964 ANKARQ7Z5J8 1434 aa12.76□□□□□ -0.37
POLR1A-208ENST00000486964 POLR3AO14802 1390 aaPredicted RBP12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms