RNA–Protein interactions for RNA: ENST00000486941.1

SNRNP40-205, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-205ENST00000486941 PKDCCQ504Y2 493 aa9.76□□□□□ -0.85
SNRNP40-205ENST00000486941 SYMPKQ92797 1274 aaKnown RBP9.76□□□□□ -0.85
SNRNP40-205ENST00000486941 TOR4AQ9NXH8 423 aa9.76□□□□□ -0.85
SNRNP40-205ENST00000486941 ST8SIA5O15466 376 aa9.75□□□□□ -0.85
SNRNP40-205ENST00000486941 HOXA2O43364 376 aa9.75□□□□□ -0.85
SNRNP40-205ENST00000486941 LMOD2Q6P5Q4 547 aa9.75□□□□□ -0.85
SNRNP40-205ENST00000486941 GPCPD1Q9NPB8 672 aa9.75□□□□□ -0.85
SNRNP40-205ENST00000486941 DXOO77932 396 aaKnown RBP9.73□□□□□ -0.85
SNRNP40-205ENST00000486941 USB1Q9BQ65 265 aaKnown RBP9.73□□□□□ -0.85
SNRNP40-205ENST00000486941 AAASQ9NRG9 546 aa9.73□□□□□ -0.85
SNRNP40-205ENST00000486941 DACH1Q9UI36 760 aa9.73□□□□□ -0.85
SNRNP40-205ENST00000486941 TULP1O00294 542 aaPredicted RBP9.72□□□□□ -0.85
SNRNP40-205ENST00000486941 ZMYND10O75800 440 aa9.72□□□□□ -0.85
SNRNP40-205ENST00000486941 GRIPAP1Q4V328 841 aa9.72□□□□□ -0.85
SNRNP40-205ENST00000486941 BARGINQ6ZT62 677 aa9.72□□□□□ -0.85
SNRNP40-205ENST00000486941 ZNF775Q96BV0 537 aaPredicted RBP9.72□□□□□ -0.85
SNRNP40-205ENST00000486941 CD2BP2O95400 341 aaKnown RBP9.71□□□□□ -0.86
SNRNP40-205ENST00000486941 CLCN1P35523 988 aa9.71□□□□□ -0.86
SNRNP40-205ENST00000486941 Q3C1V9 767 aa9.71□□□□□ -0.86
SNRNP40-205ENST00000486941 PCDHGC3Q9UN70 934 aa9.71□□□□□ -0.86
SNRNP40-205ENST00000486941 ZC3H15Q8WU90 426 aaKnown RBP9.7□□□□□ -0.86
SNRNP40-205ENST00000486941 USP46P62068 366 aa9.69□□□□□ -0.86
SNRNP40-205ENST00000486941 TRIM32Q13049 653 aa9.68□□□□□ -0.86
SNRNP40-205ENST00000486941 AVPP01185 164 aa9.67□□□□□ -0.86
SNRNP40-205ENST00000486941 SSTR3P32745 418 aaPredicted RBP9.67□□□□□ -0.86
SNRNP40-205ENST00000486941 SKOR1P84550 965 aa9.66□□□□□ -0.86
SNRNP40-205ENST00000486941 PTCRAQ6ISU1 281 aaPredicted RBP9.66□□□□□ -0.86
SNRNP40-205ENST00000486941 SPIRE2Q8WWL2 714 aa9.66□□□□□ -0.86
SNRNP40-205ENST00000486941 NDUFV2P19404 249 aa9.65□□□□□ -0.86
SNRNP40-205ENST00000486941 WNT7AO00755 349 aa9.64□□□□□ -0.87
SNRNP40-205ENST00000486941 SMPD1P17405 629 aa9.64□□□□□ -0.87
SNRNP40-205ENST00000486941 CYP4X1Q8N118 509 aa9.64□□□□□ -0.87
SNRNP40-205ENST00000486941 CRIPAKQ8N1N5 446 aa9.64□□□□□ -0.87
SNRNP40-205ENST00000486941 KRI1Q8N9T8 703 aaKnown RBP9.64□□□□□ -0.87
SNRNP40-205ENST00000486941 MRGPRX2Q96LB1 330 aa9.64□□□□□ -0.87
SNRNP40-205ENST00000486941 J3QL48 77 aa9.63□□□□□ -0.87
SNRNP40-205ENST00000486941 ZBTB24O43167 697 aaPredicted RBP9.63□□□□□ -0.87
SNRNP40-205ENST00000486941 AMHR2Q16671 573 aa9.63□□□□□ -0.87
SNRNP40-205ENST00000486941 MOXD2PA6NHM9 499 aa9.62□□□□□ -0.87
SNRNP40-205ENST00000486941 JUNDP17535 347 aa9.62□□□□□ -0.87
SNRNP40-205ENST00000486941 CCDC24Q8N4L8 307 aa9.62□□□□□ -0.87
SNRNP40-205ENST00000486941 FDX1P10109 184 aa9.61□□□□□ -0.87
SNRNP40-205ENST00000486941 NUTM1Q86Y26 1132 aa9.61□□□□□ -0.87
SNRNP40-205ENST00000486941 GIGYF2Q6Y7W6 1299 aaKnown RBP9.6□□□□□ -0.87
SNRNP40-205ENST00000486941 RETREG3Q86VR2 466 aa9.6□□□□□ -0.87
SNRNP40-205ENST00000486941 SNIP1Q8TAD8 396 aaKnown RBP9.59□□□□□ -0.87
SNRNP40-205ENST00000486941 TTC24A2A3L6 582 aaPredicted RBP9.58□□□□□ -0.88
SNRNP40-205ENST00000486941 TRIM66O15016 1216 aa9.58□□□□□ -0.88
SNRNP40-205ENST00000486941 MS4A1P11836 297 aa9.58□□□□□ -0.88
SNRNP40-205ENST00000486941 SMCPP49901 116 aaPredicted RBP9.58□□□□□ -0.88
SNRNP40-205ENST00000486941 LCE2AQ5TA79 106 aaPredicted RBP9.58□□□□□ -0.88
SNRNP40-205ENST00000486941 RC3H1Q5TC82 1133 aaKnown RBP9.58□□□□□ -0.88
SNRNP40-205ENST00000486941 PARP9Q8IXQ6 854 aa9.58□□□□□ -0.88
SNRNP40-205ENST00000486941 GMPR2Q9P2T1 348 aaKnown RBP9.58□□□□□ -0.88
SNRNP40-205ENST00000486941 TTLL12Q14166 644 aaPredicted RBP9.57□□□□□ -0.88
SNRNP40-205ENST00000486941 C6orf229H3BNL8 230 aa9.56□□□□□ -0.88
SNRNP40-205ENST00000486941 HPS1Q92902 700 aa9.56□□□□□ -0.88
SNRNP40-205ENST00000486941 NUDT12Q9BQG2 462 aa9.56□□□□□ -0.88
SNRNP40-205ENST00000486941 BEGAINQ9BUH8 593 aa9.56□□□□□ -0.88
SNRNP40-205ENST00000486941 AXIN1O15169 862 aa9.55□□□□□ -0.88
SNRNP40-205ENST00000486941 SIAH2O43255 324 aa9.55□□□□□ -0.88
SNRNP40-205ENST00000486941 PCDHB15Q9Y5E8 787 aa9.55□□□□□ -0.88
SNRNP40-205ENST00000486941 TBC1D2Q9BYX2 928 aa9.54□□□□□ -0.88
SNRNP40-205ENST00000486941 WNT7BP56706 349 aa9.53□□□□□ -0.88
SNRNP40-205ENST00000486941 CTC1Q2NKJ3 1217 aa9.53□□□□□ -0.88
SNRNP40-205ENST00000486941 SH3BP2P78314 561 aa9.52□□□□□ -0.89
SNRNP40-205ENST00000486941 PRR7Q8TB68 274 aa9.52□□□□□ -0.89
SNRNP40-205ENST00000486941 EVA1BQ9NVM1 165 aa9.51□□□□□ -0.89
SNRNP40-205ENST00000486941 RSBN1LQ6PCB5 846 aaPredicted RBP9.5□□□□□ -0.89
SNRNP40-205ENST00000486941 CFAP99D6REC4 459 aa9.49□□□□□ -0.89
SNRNP40-205ENST00000486941 CCNYL3P0C7X3 344 aa9.49□□□□□ -0.89
SNRNP40-205ENST00000486941 SNRPBP14678 240 aaKnown RBP9.49□□□□□ -0.89
SNRNP40-205ENST00000486941 LCE2CQ5TA81 110 aa9.49□□□□□ -0.89
SNRNP40-205ENST00000486941 ATP13A2Q9NQ11 1180 aa9.49□□□□□ -0.89
SNRNP40-205ENST00000486941 SPTLC1O15269 473 aa9.48□□□□□ -0.89
SNRNP40-205ENST00000486941 MTMR2Q13614 643 aa9.48□□□□□ -0.89
SNRNP40-205ENST00000486941 PTPRNQ16849 979 aa9.48□□□□□ -0.89
SNRNP40-205ENST00000486941 TREML4Q6UXN2 200 aa9.48□□□□□ -0.89
SNRNP40-205ENST00000486941 AK7Q96M32 723 aa9.48□□□□□ -0.89
SNRNP40-205ENST00000486941 UNC93B1Q9H1C4 597 aa9.48□□□□□ -0.89
SNRNP40-205ENST00000486941 C11orf95C9JLR9 678 aaPredicted RBP9.47□□□□□ -0.89
SNRNP40-205ENST00000486941 ALDH1A1P00352 501 aa9.47□□□□□ -0.89
SNRNP40-205ENST00000486941 KCNH2Q12809 1159 aa9.47□□□□□ -0.89
SNRNP40-205ENST00000486941 BAP1Q92560 729 aa9.47□□□□□ -0.89
SNRNP40-205ENST00000486941 LINC01559Q495D7 138 aa9.46□□□□□ -0.9
SNRNP40-205ENST00000486941 CABLES1Q8TDN4 633 aa9.46□□□□□ -0.9
SNRNP40-205ENST00000486941 HRCP23327 699 aa9.45□□□□□ -0.9
SNRNP40-205ENST00000486941 GJA5P36382 358 aa9.45□□□□□ -0.9
SNRNP40-205ENST00000486941 PDE4DQ08499 809 aa9.45□□□□□ -0.9
SNRNP40-205ENST00000486941 DESI1Q6ICB0 168 aa9.45□□□□□ -0.9
SNRNP40-205ENST00000486941 SLC24A3Q9HC58 644 aa9.45□□□□□ -0.9
SNRNP40-205ENST00000486941 LIMD1Q9UGP4 676 aa9.45□□□□□ -0.9
SNRNP40-205ENST00000486941 LYPD8Q6UX82 237 aa9.44□□□□□ -0.9
SNRNP40-205ENST00000486941 PER1O15534 1290 aaPredicted RBP9.43□□□□□ -0.9
SNRNP40-205ENST00000486941 RIC3Q7Z5B4 369 aa9.43□□□□□ -0.9
SNRNP40-205ENST00000486941 EHBP1Q8NDI1 1231 aa9.43□□□□□ -0.9
SNRNP40-205ENST00000486941 SPDYE5A6NIY4 337 aa9.42□□□□□ -0.9
SNRNP40-205ENST00000486941 NFX1Q12986 1120 aaKnown RBP9.42□□□□□ -0.9
SNRNP40-205ENST00000486941 QPCTQ16769 361 aa9.42□□□□□ -0.9
SNRNP40-205ENST00000486941 F12P00748 615 aaPredicted RBP9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms