RNA–Protein interactions for RNA: ENST00000486881.1

CHL1-214, Transcript of cell adhesion molecule L1 like, humanhuman

TSL 4

Gene CHL1, Length 555 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1-214ENST00000486881 SLC24A3Q9HC58 644 aa9.54□□□□□ -0.88
CHL1-214ENST00000486881 FCF1Q9Y324 198 aaKnown RBP9.54□□□□□ -0.88
CHL1-214ENST00000486881 RPIAP49247 311 aa9.53□□□□□ -0.88
CHL1-214ENST00000486881 FOXC1Q12948 553 aa9.53□□□□□ -0.88
CHL1-214ENST00000486881 CD2BP2O95400 341 aaKnown RBP9.52□□□□□ -0.89
CHL1-214ENST00000486881 CD46P15529 392 aa9.52□□□□□ -0.89
CHL1-214ENST00000486881 FAM217BQ9NTX9 383 aaPredicted RBP9.52□□□□□ -0.89
CHL1-214ENST00000486881 PRDM9Q9NQV7 894 aa9.51□□□□□ -0.89
CHL1-214ENST00000486881 PKD2L1Q9P0L9 805 aa9.51□□□□□ -0.89
CHL1-214ENST00000486881 RNF19BQ6ZMZ0 732 aa9.5□□□□□ -0.89
CHL1-214ENST00000486881 SSTR3P32745 418 aaPredicted RBP9.49□□□□□ -0.89
CHL1-214ENST00000486881 USP46P62068 366 aa9.49□□□□□ -0.89
CHL1-214ENST00000486881 PDE4DQ08499 809 aa9.49□□□□□ -0.89
CHL1-214ENST00000486881 Q3C1V9 767 aa9.49□□□□□ -0.89
CHL1-214ENST00000486881 MSS51Q4VC12 460 aa9.49□□□□□ -0.89
CHL1-214ENST00000486881 GIGYF2Q6Y7W6 1299 aaKnown RBP9.49□□□□□ -0.89
CHL1-214ENST00000486881 ZBTB24O43167 697 aaPredicted RBP9.48□□□□□ -0.89
CHL1-214ENST00000486881 KDM4AO75164 1064 aa9.48□□□□□ -0.89
CHL1-214ENST00000486881 NUTM1Q86Y26 1132 aa9.47□□□□□ -0.89
CHL1-214ENST00000486881 PARP9Q8IXQ6 854 aa9.47□□□□□ -0.89
CHL1-214ENST00000486881 DIXDC1Q155Q3 683 aa9.46□□□□□ -0.9
CHL1-214ENST00000486881 REPIN1Q9BWE0 567 aaKnown RBP9.45□□□□□ -0.9
CHL1-214ENST00000486881 TPRNQ4KMQ1 711 aa9.44□□□□□ -0.9
CHL1-214ENST00000486881 CYP4X1Q8N118 509 aa9.44□□□□□ -0.9
CHL1-214ENST00000486881 ZNF775Q96BV0 537 aaPredicted RBP9.44□□□□□ -0.9
CHL1-214ENST00000486881 USB1Q9BQ65 265 aaKnown RBP9.44□□□□□ -0.9
CHL1-214ENST00000486881 POTECB2RU33 542 aa9.43□□□□□ -0.9
CHL1-214ENST00000486881 ST8SIA5O15466 376 aa9.43□□□□□ -0.9
CHL1-214ENST00000486881 AAASQ9NRG9 546 aa9.43□□□□□ -0.9
CHL1-214ENST00000486881 MMP16P51512 607 aa9.42□□□□□ -0.9
CHL1-214ENST00000486881 BEGAINQ9BUH8 593 aa9.42□□□□□ -0.9
CHL1-214ENST00000486881 TOR4AQ9NXH8 423 aa9.42□□□□□ -0.9
CHL1-214ENST00000486881 HLA-CQ95604 372 aa9.41□□□□□ -0.9
CHL1-214ENST00000486881 HOXA2O43364 376 aa9.4□□□□□ -0.9
CHL1-214ENST00000486881 TTC24A2A3L6 582 aaPredicted RBP9.39□□□□□ -0.91
CHL1-214ENST00000486881 DXOO77932 396 aaKnown RBP9.38□□□□□ -0.91
CHL1-214ENST00000486881 TRIM32Q13049 653 aa9.38□□□□□ -0.91
CHL1-214ENST00000486881 CCDC24Q8N4L8 307 aa9.38□□□□□ -0.91
CHL1-214ENST00000486881 WNT7AO00755 349 aa9.37□□□□□ -0.91
CHL1-214ENST00000486881 AVPP01185 164 aa9.37□□□□□ -0.91
CHL1-214ENST00000486881 MS4A1P11836 297 aa9.37□□□□□ -0.91
CHL1-214ENST00000486881 GUCA2AQ02747 115 aa9.37□□□□□ -0.91
CHL1-214ENST00000486881 AXIN1O15169 862 aa9.36□□□□□ -0.91
CHL1-214ENST00000486881 CRIPAKQ8N1N5 446 aa9.36□□□□□ -0.91
CHL1-214ENST00000486881 SPIRE2Q8WWL2 714 aa9.36□□□□□ -0.91
CHL1-214ENST00000486881 GJA5P36382 358 aa9.35□□□□□ -0.91
CHL1-214ENST00000486881 SNIP1Q8TAD8 396 aaKnown RBP9.35□□□□□ -0.91
CHL1-214ENST00000486881 SYMPKQ92797 1274 aaKnown RBP9.35□□□□□ -0.91
CHL1-214ENST00000486881 DACH1Q9UI36 760 aa9.35□□□□□ -0.91
CHL1-214ENST00000486881 DDRGK1Q96HY6 314 aa9.34□□□□□ -0.91
CHL1-214ENST00000486881 TBC1D2Q9BYX2 928 aa9.34□□□□□ -0.91
CHL1-214ENST00000486881 RSPH6AQ9H0K4 717 aa9.34□□□□□ -0.91
CHL1-214ENST00000486881 KDM4CQ9H3R0 1056 aa9.34□□□□□ -0.91
CHL1-214ENST00000486881 FDX1P10109 184 aa9.33□□□□□ -0.92
CHL1-214ENST00000486881 CTC1Q2NKJ3 1217 aa9.33□□□□□ -0.92
CHL1-214ENST00000486881 MRGPRX2Q96LB1 330 aa9.33□□□□□ -0.92
CHL1-214ENST00000486881 JUNDP17535 347 aa9.32□□□□□ -0.92
CHL1-214ENST00000486881 SMPD1P17405 629 aa9.31□□□□□ -0.92
CHL1-214ENST00000486881 SMCPP49901 116 aaPredicted RBP9.31□□□□□ -0.92
CHL1-214ENST00000486881 NEUROD2Q15784 382 aa9.3□□□□□ -0.92
CHL1-214ENST00000486881 RC3H1Q5TC82 1133 aaKnown RBP9.3□□□□□ -0.92
CHL1-214ENST00000486881 RETREG3Q86VR2 466 aa9.3□□□□□ -0.92
CHL1-214ENST00000486881 GPBP1L1Q9HC44 474 aaPredicted RBP9.3□□□□□ -0.92
CHL1-214ENST00000486881 MOXD2PA6NHM9 499 aa9.29□□□□□ -0.92
CHL1-214ENST00000486881 SPDYE5A6NIY4 337 aa9.29□□□□□ -0.92
CHL1-214ENST00000486881 C6orf229H3BNL8 230 aa9.29□□□□□ -0.92
CHL1-214ENST00000486881 J3QL48 77 aa9.29□□□□□ -0.92
CHL1-214ENST00000486881 RSBN1LQ6PCB5 846 aaPredicted RBP9.29□□□□□ -0.92
CHL1-214ENST00000486881 GMPR2Q9P2T1 348 aaKnown RBP9.29□□□□□ -0.92
CHL1-214ENST00000486881 C11orf95C9JLR9 678 aaPredicted RBP9.28□□□□□ -0.92
CHL1-214ENST00000486881 WNT7BP56706 349 aa9.28□□□□□ -0.92
CHL1-214ENST00000486881 SKOR1P84550 965 aa9.28□□□□□ -0.92
CHL1-214ENST00000486881 PCDHGC3Q9UN70 934 aa9.28□□□□□ -0.92
CHL1-214ENST00000486881 SPTLC1O15269 473 aa9.27□□□□□ -0.93
CHL1-214ENST00000486881 NDUFV2P19404 249 aa9.27□□□□□ -0.93
CHL1-214ENST00000486881 MTMR2Q13614 643 aa9.27□□□□□ -0.93
CHL1-214ENST00000486881 RIC3Q7Z5B4 369 aa9.27□□□□□ -0.93
CHL1-214ENST00000486881 NUDT12Q9BQG2 462 aa9.27□□□□□ -0.93
CHL1-214ENST00000486881 TUSC1Q2TAM9 212 aa9.26□□□□□ -0.93
CHL1-214ENST00000486881 MYSM1Q5VVJ2 828 aa9.26□□□□□ -0.93
CHL1-214ENST00000486881 PRPF38BQ5VTL8 546 aaKnown RBP9.25□□□□□ -0.93
CHL1-214ENST00000486881 PTCRAQ6ISU1 281 aaPredicted RBP9.25□□□□□ -0.93
CHL1-214ENST00000486881 TREML4Q6UXN2 200 aa9.25□□□□□ -0.93
CHL1-214ENST00000486881 HPS1Q92902 700 aa9.25□□□□□ -0.93
CHL1-214ENST00000486881 ZBTB3Q9H5J0 574 aa9.25□□□□□ -0.93
CHL1-214ENST00000486881 CLK2P49760 499 aaKnown RBP9.24□□□□□ -0.93
CHL1-214ENST00000486881 FAM117AQ9C073 453 aa9.24□□□□□ -0.93
CHL1-214ENST00000486881 SH3D19Q5HYK7 790 aa9.23□□□□□ -0.93
CHL1-214ENST00000486881 ATP13A2Q9NQ11 1180 aa9.23□□□□□ -0.93
CHL1-214ENST00000486881 ALDH1A1P00352 501 aa9.22□□□□□ -0.93
CHL1-214ENST00000486881 BRPF1P55201 1214 aaPredicted RBP9.22□□□□□ -0.93
CHL1-214ENST00000486881 CCNYL3P0C7X3 344 aa9.21□□□□□ -0.94
CHL1-214ENST00000486881 SKIV2LQ15477 1246 aaKnown RBP9.21□□□□□ -0.94
CHL1-214ENST00000486881 EHBP1Q8NDI1 1231 aa9.21□□□□□ -0.94
CHL1-214ENST00000486881 DESI1Q6ICB0 168 aa9.2□□□□□ -0.94
CHL1-214ENST00000486881 PRR7Q8TB68 274 aa9.2□□□□□ -0.94
CHL1-214ENST00000486881 ATP1B4Q9UN42 357 aaPredicted RBP9.2□□□□□ -0.94
CHL1-214ENST00000486881 NUTM2BA6NNL0 878 aaPredicted RBP9.19□□□□□ -0.94
CHL1-214ENST00000486881 NUTM2EB1AL46 878 aaPredicted RBP9.19□□□□□ -0.94
CHL1-214ENST00000486881 PTPRNQ16849 979 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms