RNA–Protein interactions for RNA: ENST00000486867.1

SF1-216, Transcript of splicing factor 1, humanhuman

TSL 3

Gene SF1, Length 875 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-216ENST00000486867 ATF3P18847 181 aa19.01■□□□□ 0.63
SF1-216ENST00000486867 C14orf37Q86TY3 774 aa19.01■□□□□ 0.63
SF1-216ENST00000486867 STK26Q9P289 416 aa19.01■□□□□ 0.63
SF1-216ENST00000486867 WAPLQ7Z5K2 1190 aa18.99■□□□□ 0.63
SF1-216ENST00000486867 PHLPP1O60346 1717 aa18.99■□□□□ 0.63
SF1-216ENST00000486867 RGPD8O14715 1765 aaPredicted RBP18.98■□□□□ 0.63
SF1-216ENST00000486867 COL16A1Q07092 1604 aaPredicted RBP18.98■□□□□ 0.63
SF1-216ENST00000486867 C1orf167Q5SNV9 1468 aa18.97■□□□□ 0.63
SF1-216ENST00000486867 HSPA1LP34931 641 aa18.97■□□□□ 0.63
SF1-216ENST00000486867 GPRASP1Q5JY77 1395 aa18.96■□□□□ 0.63
SF1-216ENST00000486867 TONSLQ96HA7 1378 aa18.96■□□□□ 0.63
SF1-216ENST00000486867 SCAF1Q9H7N4 1312 aaKnown RBP18.96■□□□□ 0.63
SF1-216ENST00000486867 NBPF1Q3BBV0 1214 aa18.95■□□□□ 0.62
SF1-216ENST00000486867 USP32Q8NFA0 1604 aa18.94■□□□□ 0.62
SF1-216ENST00000486867 PRAM1Q96QH2 718 aa18.94■□□□□ 0.62
SF1-216ENST00000486867 RALGAPBQ86X10 1494 aa18.94■□□□□ 0.62
SF1-216ENST00000486867 QRICH2Q9H0J4 1663 aa18.93■□□□□ 0.62
SF1-216ENST00000486867 NBPF8Q3BBV2 869 aa18.93■□□□□ 0.62
SF1-216ENST00000486867 BRINP3Q76B58 766 aa18.93■□□□□ 0.62
SF1-216ENST00000486867 TRAK1Q9UPV9 953 aa18.93■□□□□ 0.62
SF1-216ENST00000486867 KIF1AQ12756 1690 aa18.92■□□□□ 0.62
SF1-216ENST00000486867 TIMELESSQ9UNS1 1208 aa18.92■□□□□ 0.62
SF1-216ENST00000486867 SHPRHQ149N8 1683 aa18.9■□□□□ 0.62
SF1-216ENST00000486867 ITSN1Q15811 1721 aa18.89■□□□□ 0.61
SF1-216ENST00000486867 ANKARQ7Z5J8 1434 aa18.89■□□□□ 0.61
SF1-216ENST00000486867 POGKQ9P215 609 aa18.88■□□□□ 0.61
SF1-216ENST00000486867 TULP4Q9NRJ4 1543 aa18.88■□□□□ 0.61
SF1-216ENST00000486867 ROCK2O75116 1388 aaKnown RBP18.87■□□□□ 0.61
SF1-216ENST00000486867 TOPAZ1Q8N9V7 1692 aa18.86■□□□□ 0.61
SF1-216ENST00000486867 EIF3AQ14152 1382 aaKnown RBP18.84■□□□□ 0.61
SF1-216ENST00000486867 SAFB2Q14151 953 aaKnown RBP eCLIP18.83■□□□□ 0.6
SF1-216ENST00000486867 ORAI2Q96SN7 254 aa18.83■□□□□ 0.6
SF1-216ENST00000486867 MED1Q15648 1581 aaPredicted RBP18.83■□□□□ 0.6
SF1-216ENST00000486867 PXDNQ92626 1479 aa18.83■□□□□ 0.6
SF1-216ENST00000486867 CENPJQ9HC77 1338 aaPredicted RBP18.82■□□□□ 0.6
SF1-216ENST00000486867 ATP7BP35670 1465 aa18.82■□□□□ 0.6
SF1-216ENST00000486867 SBNO2Q9Y2G9 1366 aa18.81■□□□□ 0.6
SF1-216ENST00000486867 SOS2Q07890 1332 aaPredicted RBP18.81■□□□□ 0.6
SF1-216ENST00000486867 MINK1Q8N4C8 1332 aaPredicted RBP18.81■□□□□ 0.6
SF1-216ENST00000486867 WASLO00401 505 aaPredicted RBP18.81■□□□□ 0.6
SF1-216ENST00000486867 CCER1Q8TC90 406 aaPredicted RBP18.81■□□□□ 0.6
SF1-216ENST00000486867 JCADQ9P266 1359 aa18.81■□□□□ 0.6
SF1-216ENST00000486867 COL22A1Q8NFW1 1626 aaPredicted RBP18.8■□□□□ 0.6
SF1-216ENST00000486867 PRR36Q9H6K5 1346 aa18.79■□□□□ 0.6
SF1-216ENST00000486867 TRPM3Q9HCF6 1732 aaPredicted RBP18.79■□□□□ 0.6
SF1-216ENST00000486867 HIRIP3Q9BW71 556 aaPredicted RBP18.78■□□□□ 0.6
SF1-216ENST00000486867 NPHP3Q7Z494 1330 aa18.77■□□□□ 0.6
SF1-216ENST00000486867 ESCO1Q5FWF5 840 aa18.77■□□□□ 0.6
SF1-216ENST00000486867 DDX17Q92841 729 aaKnown RBP18.75■□□□□ 0.59
SF1-216ENST00000486867 CARD11Q9BXL7 1154 aa18.75■□□□□ 0.59
SF1-216ENST00000486867 ALS2Q96Q42 1657 aa18.74■□□□□ 0.59
SF1-216ENST00000486867 NUTM2FA1L443 756 aa18.74■□□□□ 0.59
SF1-216ENST00000486867 LRRC59Q96AG4 307 aaKnown RBP18.74■□□□□ 0.59
SF1-216ENST00000486867 PHF8Q9UPP1 1060 aa18.74■□□□□ 0.59
SF1-216ENST00000486867 PNPLA6Q8IY17 1366 aa18.73■□□□□ 0.59
SF1-216ENST00000486867 CDK19Q9BWU1 502 aa18.73■□□□□ 0.59
SF1-216ENST00000486867 SPATA31A6Q5VVP1 1343 aa18.73■□□□□ 0.59
SF1-216ENST00000486867 MARF1Q9Y4F3 1742 aaKnown RBP18.72■□□□□ 0.59
SF1-216ENST00000486867 FOXO3O43524 673 aa18.71■□□□□ 0.59
SF1-216ENST00000486867 NUDT16Q96DE0 195 aaKnown RBP18.71■□□□□ 0.59
SF1-216ENST00000486867 LRP6O75581 1613 aa18.71■□□□□ 0.58
SF1-216ENST00000486867 POLR3AO14802 1390 aaPredicted RBP18.7■□□□□ 0.58
SF1-216ENST00000486867 ABCA3Q99758 1704 aa18.7■□□□□ 0.58
SF1-216ENST00000486867 AKAP12Q02952 1782 aa18.7■□□□□ 0.58
SF1-216ENST00000486867 SBNO1A3KN83 1393 aa18.69■□□□□ 0.58
SF1-216ENST00000486867 CRYBG1Q9Y4K1 1723 aa18.69■□□□□ 0.58
SF1-216ENST00000486867 PLEKHG3A1L390 1219 aa18.68■□□□□ 0.58
SF1-216ENST00000486867 CCDC61Q9Y6R9 512 aa18.68■□□□□ 0.58
SF1-216ENST00000486867 EVC2Q86UK5 1308 aa18.68■□□□□ 0.58
SF1-216ENST00000486867 SPATA31A3Q5VYP0 1347 aa18.67■□□□□ 0.58
SF1-216ENST00000486867 TNS3Q68CZ2 1445 aa18.66■□□□□ 0.58
SF1-216ENST00000486867 TESK2Q96S53 571 aa18.66■□□□□ 0.58
SF1-216ENST00000486867 USP47Q96K76 1375 aa18.66■□□□□ 0.58
SF1-216ENST00000486867 KRT28Q7Z3Y7 464 aa18.65■□□□□ 0.58
SF1-216ENST00000486867 MON2Q7Z3U7 1717 aa18.64■□□□□ 0.57
SF1-216ENST00000486867 PMFBP1Q8TBY8 1022 aa18.64■□□□□ 0.57
SF1-216ENST00000486867 PUS7Q96PZ0 661 aaKnown RBP18.64■□□□□ 0.57
SF1-216ENST00000486867 PPIP5K1Q6PFW1 1433 aa18.64■□□□□ 0.57
SF1-216ENST00000486867 SLC24A1O60721 1099 aa18.63■□□□□ 0.57
SF1-216ENST00000486867 SRPK2P78362 688 aaKnown RBP18.63■□□□□ 0.57
SF1-216ENST00000486867 PSME1Q06323 249 aa18.63■□□□□ 0.57
SF1-216ENST00000486867 CABP2Q9NPB3 220 aa18.63■□□□□ 0.57
SF1-216ENST00000486867 ATAD2Q6PL18 1390 aa18.63■□□□□ 0.57
SF1-216ENST00000486867 ST20-MTHFSA0A0A6YYL1 179 aa18.62■□□□□ 0.57
SF1-216ENST00000486867 XPCQ01831 940 aaPredicted RBP18.62■□□□□ 0.57
SF1-216ENST00000486867 BRD4O60885 1362 aaPredicted RBP18.62■□□□□ 0.57
SF1-216ENST00000486867 DISP3Q9P2K9 1392 aa18.62■□□□□ 0.57
SF1-216ENST00000486867 NRKQ7Z2Y5 1582 aa18.62■□□□□ 0.57
SF1-216ENST00000486867 ARHGEF10O15013 1369 aa18.61■□□□□ 0.57
SF1-216ENST00000486867 ACEP12821 1306 aa18.6■□□□□ 0.57
SF1-216ENST00000486867 NGDNQ8NEJ9 315 aaKnown RBP18.59■□□□□ 0.57
SF1-216ENST00000486867 CPSF1Q10570 1443 aaKnown RBP18.58■□□□□ 0.57
SF1-216ENST00000486867 SSH2Q76I76 1423 aa18.58■□□□□ 0.57
SF1-216ENST00000486867 PHRF1Q9P1Y6 1649 aaKnown RBP18.58■□□□□ 0.56
SF1-216ENST00000486867 RGS17Q9UGC6 210 aaPredicted RBP18.57■□□□□ 0.56
SF1-216ENST00000486867 CD163L1Q9NR16 1453 aa18.57■□□□□ 0.56
SF1-216ENST00000486867 USP6P35125 1406 aa18.57■□□□□ 0.56
SF1-216ENST00000486867 USP54Q70EL1 1684 aa18.57■□□□□ 0.56
SF1-216ENST00000486867 CABP1Q9NZU7 370 aa18.56■□□□□ 0.56
SF1-216ENST00000486867 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms