RNA–Protein interactions for RNA: ENST00000486530.1

HPS3-206, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 5

Gene HPS3, Length 1,894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-206ENST00000486530 STK26Q9P289 416 aa27.19■■□□□ 1.94
HPS3-206ENST00000486530 HDGFP51858 240 aaKnown RBP27.18■■□□□ 1.94
HPS3-206ENST00000486530 TMEM2Q9UHN6 1383 aa27.18■■□□□ 1.94
HPS3-206ENST00000486530 WDR43Q15061 677 aaKnown RBP eCLIP27.17■■□□□ 1.94
HPS3-206ENST00000486530 PLPPR3Q6T4P5 718 aa27.17■■□□□ 1.94
HPS3-206ENST00000486530 SLC12A5Q9H2X9 1139 aa27.17■■□□□ 1.94
HPS3-206ENST00000486530 NINLQ9Y2I6 1382 aa27.17■■□□□ 1.94
HPS3-206ENST00000486530 SENP3-EIF4A1A0A087X0R7 540 aa27.17■■□□□ 1.94
HPS3-206ENST00000486530 DLC1Q96QB1 1528 aa27.16■■□□□ 1.94
HPS3-206ENST00000486530 ANKRD36BQ8N2N9 1353 aa27.16■■□□□ 1.94
HPS3-206ENST00000486530 RNF123Q5XPI4 1314 aa27.16■■□□□ 1.94
HPS3-206ENST00000486530 ADAMTS8Q9UP79 889 aa27.14■■□□□ 1.94
HPS3-206ENST00000486530 NRXN3Q9Y4C0 1643 aa27.14■■□□□ 1.93
HPS3-206ENST00000486530 PRAM1Q96QH2 718 aa27.1■■□□□ 1.93
HPS3-206ENST00000486530 ATAD2Q6PL18 1390 aa27.1■■□□□ 1.93
HPS3-206ENST00000486530 SAFB2Q14151 953 aaKnown RBP eCLIP27.1■■□□□ 1.93
HPS3-206ENST00000486530 PPP4R2Q9NY27 417 aa27.1■■□□□ 1.93
HPS3-206ENST00000486530 POGKQ9P215 609 aa27.1■■□□□ 1.93
HPS3-206ENST00000486530 CGNL1Q0VF96 1302 aa27.1■■□□□ 1.93
HPS3-206ENST00000486530 NSD2O96028 1365 aa27.09■■□□□ 1.93
HPS3-206ENST00000486530 CABP2Q9NPB3 220 aa27.08■■□□□ 1.93
HPS3-206ENST00000486530 SALL2Q9Y467 1007 aaPredicted RBP27.08■■□□□ 1.93
HPS3-206ENST00000486530 LTKP29376 864 aa27.07■■□□□ 1.92
HPS3-206ENST00000486530 POLR3AO14802 1390 aaPredicted RBP27.07■■□□□ 1.92
HPS3-206ENST00000486530 MORC1Q86VD1 984 aa27.06■■□□□ 1.92
HPS3-206ENST00000486530 KNDC1Q76NI1 1749 aa27.06■■□□□ 1.92
HPS3-206ENST00000486530 METP08581 1390 aa27.05■■□□□ 1.92
HPS3-206ENST00000486530 SRPK2P78362 688 aaKnown RBP27.05■■□□□ 1.92
HPS3-206ENST00000486530 ABCC11Q96J66 1382 aa27.05■■□□□ 1.92
HPS3-206ENST00000486530 MINK1Q8N4C8 1332 aaPredicted RBP27.04■■□□□ 1.92
HPS3-206ENST00000486530 TXNDC2Q86VQ3 553 aa27.02■■□□□ 1.92
HPS3-206ENST00000486530 ARHGAP23Q9P227 1491 aa27.02■■□□□ 1.92
HPS3-206ENST00000486530 ANKRD26Q9UPS8 1709 aa27.02■■□□□ 1.92
HPS3-206ENST00000486530 ADAMTSL3P82987 1691 aa27.02■■□□□ 1.92
HPS3-206ENST00000486530 SHPRHQ149N8 1683 aa27.02■■□□□ 1.92
HPS3-206ENST00000486530 RIMS1Q86UR5 1692 aaKnown RBP27.01■■□□□ 1.92
HPS3-206ENST00000486530 A0A1W2PP64 1363 aa27.01■■□□□ 1.91
HPS3-206ENST00000486530 PLEKHG1Q9ULL1 1385 aa27.01■■□□□ 1.91
HPS3-206ENST00000486530 SLIT1O75093 1534 aa27.01■■□□□ 1.91
HPS3-206ENST00000486530 THEMISQ8N1K5 641 aaPredicted RBP27■■□□□ 1.91
HPS3-206ENST00000486530 ADAMTS13Q76LX8 1427 aa27■■□□□ 1.91
HPS3-206ENST00000486530 WAPLQ7Z5K2 1190 aa26.98■■□□□ 1.91
HPS3-206ENST00000486530 EID1Q9Y6B2 187 aa26.98■■□□□ 1.91
HPS3-206ENST00000486530 RCAN3Q9UKA8 241 aa26.97■■□□□ 1.91
HPS3-206ENST00000486530 CD163L1Q9NR16 1453 aa26.96■■□□□ 1.91
HPS3-206ENST00000486530 PLEKHH1Q9ULM0 1364 aa26.96■■□□□ 1.91
HPS3-206ENST00000486530 SIRT1Q96EB6 747 aa26.96■■□□□ 1.91
HPS3-206ENST00000486530 CDCA7LQ96GN5 454 aa26.96■■□□□ 1.91
HPS3-206ENST00000486530 TSHZ2Q9NRE2 1034 aa26.96■■□□□ 1.91
HPS3-206ENST00000486530 TERF2IPQ9NYB0 399 aa26.96■■□□□ 1.91
HPS3-206ENST00000486530 CPS1P31327 1500 aa26.95■■□□□ 1.9
HPS3-206ENST00000486530 MED14O60244 1454 aa26.94■■□□□ 1.9
HPS3-206ENST00000486530 CDK19Q9BWU1 502 aa26.94■■□□□ 1.9
HPS3-206ENST00000486530 TECPR2O15040 1411 aa26.94■■□□□ 1.9
HPS3-206ENST00000486530 ZNF521Q96K83 1311 aa26.94■■□□□ 1.9
HPS3-206ENST00000486530 KIF20BQ96Q89 1820 aa26.93■■□□□ 1.9
HPS3-206ENST00000486530 RRP1P56182 461 aaKnown RBP26.92■■□□□ 1.9
HPS3-206ENST00000486530 FAM135BQ49AJ0 1406 aa26.92■■□□□ 1.9
HPS3-206ENST00000486530 NGEFQ8N5V2 710 aa26.91■■□□□ 1.9
HPS3-206ENST00000486530 ATP7BP35670 1465 aa26.9■■□□□ 1.9
HPS3-206ENST00000486530 CEP170BQ9Y4F5 1589 aaPredicted RBP26.9■■□□□ 1.9
HPS3-206ENST00000486530 TNNT2P45379 298 aaPredicted RBP26.89■■□□□ 1.9
HPS3-206ENST00000486530 HDGFL2Q7Z4V5 671 aaPredicted RBP26.89■■□□□ 1.9
HPS3-206ENST00000486530 CCDC146Q8IYE0 955 aa26.89■■□□□ 1.89
HPS3-206ENST00000486530 CFAP53Q96M91 514 aa26.89■■□□□ 1.89
HPS3-206ENST00000486530 SLC26A8Q96RN1 970 aa26.87■■□□□ 1.89
HPS3-206ENST00000486530 TBX22Q9Y458 520 aa26.87■■□□□ 1.89
HPS3-206ENST00000486530 MTHFSP49914 203 aa26.86■■□□□ 1.89
HPS3-206ENST00000486530 GOLGA2Q08379 1002 aa26.86■■□□□ 1.89
HPS3-206ENST00000486530 B4GALNT3Q6L9W6 998 aa26.85■■□□□ 1.89
HPS3-206ENST00000486530 APAF1O14727 1248 aa26.84■■□□□ 1.89
HPS3-206ENST00000486530 ROBO2Q9HCK4 1378 aa26.84■■□□□ 1.89
HPS3-206ENST00000486530 CABP1Q9NZU7 370 aa26.83■■□□□ 1.88
HPS3-206ENST00000486530 PTPRUQ92729 1446 aa26.83■■□□□ 1.88
HPS3-206ENST00000486530 DUSP27Q5VZP5 1158 aa26.81■■□□□ 1.88
HPS3-206ENST00000486530 WASLO00401 505 aaPredicted RBP26.81■■□□□ 1.88
HPS3-206ENST00000486530 SETD1BQ9UPS6 1966 aaKnown RBP26.8■■□□□ 1.88
HPS3-206ENST00000486530 FYB1O15117 783 aa26.8■■□□□ 1.88
HPS3-206ENST00000486530 IQSEC2Q5JU85 1478 aa26.8■■□□□ 1.88
HPS3-206ENST00000486530 GGNBP2Q9H3C7 697 aa26.79■■□□□ 1.88
HPS3-206ENST00000486530 ADGRB2O60241 1585 aa26.79■■□□□ 1.88
HPS3-206ENST00000486530 SLFN5Q08AF3 891 aa26.79■■□□□ 1.88
HPS3-206ENST00000486530 ZNF142P52746 1687 aaPredicted RBP26.78■■□□□ 1.88
HPS3-206ENST00000486530 RUNDC1Q96C34 613 aa26.77■■□□□ 1.88
HPS3-206ENST00000486530 AMOTL2Q9Y2J4 779 aa26.76■■□□□ 1.88
HPS3-206ENST00000486530 DIP2AQ14689 1571 aa26.76■■□□□ 1.88
HPS3-206ENST00000486530 CDC42BPGQ6DT37 1551 aa26.76■■□□□ 1.88
HPS3-206ENST00000486530 MON2Q7Z3U7 1717 aa26.76■■□□□ 1.87
HPS3-206ENST00000486530 PPIP5K1Q6PFW1 1433 aa26.76■■□□□ 1.87
HPS3-206ENST00000486530 TRMT2AQ8IZ69 625 aaKnown RBP26.76■■□□□ 1.87
HPS3-206ENST00000486530 COL3A1P02461 1466 aaPredicted RBP26.76■■□□□ 1.87
HPS3-206ENST00000486530 ITSN1Q15811 1721 aa26.75■■□□□ 1.87
HPS3-206ENST00000486530 AKAP12Q02952 1782 aa26.75■■□□□ 1.87
HPS3-206ENST00000486530 CPSF1Q10570 1443 aaKnown RBP26.75■■□□□ 1.87
HPS3-206ENST00000486530 ANKLE2Q86XL3 938 aa26.74■■□□□ 1.87
HPS3-206ENST00000486530 CCDC136Q96JN2 1154 aa26.74■■□□□ 1.87
HPS3-206ENST00000486530 EDC4Q6P2E9 1401 aaKnown RBP26.73■■□□□ 1.87
HPS3-206ENST00000486530 E9PSI1 815 aa26.73■■□□□ 1.87
HPS3-206ENST00000486530 NKTRP30414 1462 aaKnown RBP26.73■■□□□ 1.87
HPS3-206ENST00000486530 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.71■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms