RNA–Protein interactions for RNA: ENST00000486446.2

PUDP-204, Transcript of pseudouridine 5'-phosphatase, human

TSL 2

Gene PUDP, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PUDP-204	ENST00000486446	POTEG	Q6S5H5	508 aa		10.92	□□□□□ -0.66
PUDP-204	ENST00000486446	CLTC	Q00610	1675 aa	Known RBP	10.92	□□□□□ -0.66
PUDP-204	ENST00000486446	DDX27	Q96GQ7	796 aa	Known RBP	10.91	□□□□□ -0.66
PUDP-204	ENST00000486446	MROH2A	A6NES4	1674 aa		10.91	□□□□□ -0.66
PUDP-204	ENST00000486446	UHRF1BP1	Q6BDS2	1440 aa		10.91	□□□□□ -0.66
PUDP-204	ENST00000486446	DHX29	Q7Z478	1369 aa	Known RBP	10.9	□□□□□ -0.66
PUDP-204	ENST00000486446	UBAP1L	F5GYI3	381 aa		10.9	□□□□□ -0.66
PUDP-204	ENST00000486446	PLCB2	Q00722	1185 aa		10.9	□□□□□ -0.66
PUDP-204	ENST00000486446	PTCD2	Q8WV60	388 aa	Known RBP	10.9	□□□□□ -0.66
PUDP-204	ENST00000486446	PTPN23	Q9H3S7	1636 aa		10.89	□□□□□ -0.67
PUDP-204	ENST00000486446	KIF3B	O15066	747 aa		10.89	□□□□□ -0.67
PUDP-204	ENST00000486446	MARVELD3	Q96A59	401 aa		10.89	□□□□□ -0.67
PUDP-204	ENST00000486446	MAST1	Q9Y2H9	1570 aa		10.89	□□□□□ -0.67
PUDP-204	ENST00000486446	ZMYM3	Q14202	1370 aa		10.89	□□□□□ -0.67
PUDP-204	ENST00000486446	ARSI	Q5FYB1	569 aa		10.87	□□□□□ -0.67
PUDP-204	ENST00000486446	TSHZ2	Q9NRE2	1034 aa		10.87	□□□□□ -0.67
PUDP-204	ENST00000486446	PCDHGA4	Q9Y5G9	962 aa		10.87	□□□□□ -0.67
PUDP-204	ENST00000486446	FGD6	Q6ZV73	1430 aa		10.86	□□□□□ -0.67
PUDP-204	ENST00000486446	CROCC2	H7BZ55	1655 aa		10.85	□□□□□ -0.67
PUDP-204	ENST00000486446	NPAT	Q14207	1427 aa		10.85	□□□□□ -0.67
PUDP-204	ENST00000486446	EMP3	P54852	163 aa		10.85	□□□□□ -0.67
PUDP-204	ENST00000486446	SETD1B	Q9UPS6	1966 aa	Known RBP	10.85	□□□□□ -0.67
PUDP-204	ENST00000486446	OXER1	Q8TDS5	423 aa		10.84	□□□□□ -0.67
PUDP-204	ENST00000486446	KHSRP	Q92945	711 aa	Known RBP eCLIP	10.84	□□□□□ -0.67
PUDP-204	ENST00000486446	TCOF1	Q13428	1488 aa	Known RBP	10.84	□□□□□ -0.67
PUDP-204	ENST00000486446	DNMT1	P26358	1616 aa	Known RBP	10.84	□□□□□ -0.67
PUDP-204	ENST00000486446	KDM5D	Q9BY66	1539 aa		10.84	□□□□□ -0.67
PUDP-204	ENST00000486446	ABCC5	O15440	1437 aa		10.84	□□□□□ -0.67
PUDP-204	ENST00000486446	DAPK1	P53355	1430 aa		10.84	□□□□□ -0.67
PUDP-204	ENST00000486446	PTPRK	Q15262	1439 aa		10.84	□□□□□ -0.67
PUDP-204	ENST00000486446	WASHC2C	Q9Y4E1	1318 aa		10.84	□□□□□ -0.67
PUDP-204	ENST00000486446	STRC	Q7RTU9	1775 aa		10.83	□□□□□ -0.68
PUDP-204	ENST00000486446	SHANK2	Q9UPX8	1470 aa		10.83	□□□□□ -0.68
PUDP-204	ENST00000486446	MYO3A	Q8NEV4	1616 aa		10.83	□□□□□ -0.68
PUDP-204	ENST00000486446	EIF2AK4	Q9P2K8	1649 aa	Known RBP	10.83	□□□□□ -0.68
PUDP-204	ENST00000486446	DUOX2	Q9NRD8	1548 aa		10.83	□□□□□ -0.68
PUDP-204	ENST00000486446	FAM135A	Q9P2D6	1515 aa		10.83	□□□□□ -0.68
PUDP-204	ENST00000486446	PTPRT	O14522	1441 aa		10.83	□□□□□ -0.68
PUDP-204	ENST00000486446	HSPA1L	P34931	641 aa		10.82	□□□□□ -0.68
PUDP-204	ENST00000486446	CAMK2B	Q13554	666 aa		10.82	□□□□□ -0.68
PUDP-204	ENST00000486446	FAM50A	Q14320	339 aa	Known RBP	10.82	□□□□□ -0.68
PUDP-204	ENST00000486446	LTBP4	Q8N2S1	1624 aa		10.82	□□□□□ -0.68
PUDP-204	ENST00000486446	IQSEC2	Q5JU85	1478 aa		10.81	□□□□□ -0.68
PUDP-204	ENST00000486446	RNF17	Q9BXT8	1623 aa	Known RBP	10.81	□□□□□ -0.68
PUDP-204	ENST00000486446	KIF15	Q9NS87	1388 aa		10.81	□□□□□ -0.68
PUDP-204	ENST00000486446	POTEB3	A0JP26	581 aa		10.81	□□□□□ -0.68
PUDP-204	ENST00000486446	POTEB	Q6S5H4	581 aa		10.81	□□□□□ -0.68
PUDP-204	ENST00000486446	RRP7BP	Q9NSQ0	103 aa		10.81	□□□□□ -0.68
PUDP-204	ENST00000486446	CHIC2	Q9UKJ5	165 aa		10.8	□□□□□ -0.68
PUDP-204	ENST00000486446	ZC3H13	Q5T200	1668 aa	Known RBP	10.79	□□□□□ -0.68
PUDP-204	ENST00000486446	MED1	Q15648	1581 aa	Predicted RBP	10.79	□□□□□ -0.68
PUDP-204	ENST00000486446	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	10.79	□□□□□ -0.68
PUDP-204	ENST00000486446	TBC1D12	O60347	775 aa		10.79	□□□□□ -0.68
PUDP-204	ENST00000486446	NUDT7	P0C024	238 aa		10.79	□□□□□ -0.68
PUDP-204	ENST00000486446	FBXO31	Q5XUX0	539 aa	Predicted RBP	10.79	□□□□□ -0.68
PUDP-204	ENST00000486446	PPARGC1B	Q86YN6	1023 aa	Known RBP	10.79	□□□□□ -0.68
PUDP-204	ENST00000486446	EMILIN3	Q9NT22	766 aa		10.79	□□□□□ -0.68
PUDP-204	ENST00000486446	CAMSAP1	Q5T5Y3	1602 aa		10.79	□□□□□ -0.68
PUDP-204	ENST00000486446	PZP	P20742	1482 aa		10.79	□□□□□ -0.68
PUDP-204	ENST00000486446	ZNF142	P52746	1687 aa	Predicted RBP	10.79	□□□□□ -0.68
PUDP-204	ENST00000486446	TNR	Q92752	1358 aa		10.78	□□□□□ -0.68
PUDP-204	ENST00000486446	ANKRD30A	Q9BXX3	1397 aa		10.78	□□□□□ -0.68
PUDP-204	ENST00000486446	ERBIN	Q96RT1	1412 aa		10.78	□□□□□ -0.68
PUDP-204	ENST00000486446	FAM205C	A6NFA0	338 aa		10.78	□□□□□ -0.68
PUDP-204	ENST00000486446	HS3ST6	Q96QI5	342 aa		10.78	□□□□□ -0.68
PUDP-204	ENST00000486446	PCDH10	Q9P2E7	1040 aa		10.78	□□□□□ -0.68
PUDP-204	ENST00000486446	ABCC3	O15438	1527 aa		10.78	□□□□□ -0.68
PUDP-204	ENST00000486446	CEP152	O94986	1710 aa		10.78	□□□□□ -0.68
PUDP-204	ENST00000486446	MROH1	Q8NDA8	1641 aa		10.77	□□□□□ -0.68
PUDP-204	ENST00000486446	NCOA1	Q15788	1441 aa		10.77	□□□□□ -0.68
PUDP-204	ENST00000486446	PIP4K2B	P78356	416 aa		10.77	□□□□□ -0.69
PUDP-204	ENST00000486446	ERBB3	P21860	1342 aa		10.77	□□□□□ -0.69
PUDP-204	ENST00000486446	A2ML1	A8K2U0	1454 aa		10.76	□□□□□ -0.69
PUDP-204	ENST00000486446	ZNF316	A6NFI3	1004 aa	Predicted RBP	10.76	□□□□□ -0.69
PUDP-204	ENST00000486446	UPF1	Q92900	1129 aa	Known RBP eCLIP	10.76	□□□□□ -0.69
PUDP-204	ENST00000486446	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	10.75	□□□□□ -0.69
PUDP-204	ENST00000486446	KANK1	Q14678	1352 aa		10.75	□□□□□ -0.69
PUDP-204	ENST00000486446	PRDM15	P57071	1507 aa	Predicted RBP	10.74	□□□□□ -0.69
PUDP-204	ENST00000486446	CDAN1	Q8IWY9	1227 aa		10.74	□□□□□ -0.69
PUDP-204	ENST00000486446	WDR70	Q9NW82	654 aa		10.74	□□□□□ -0.69
PUDP-204	ENST00000486446	ADGRL2	O95490	1459 aa		10.74	□□□□□ -0.69
PUDP-204	ENST00000486446	PLA2R1	Q13018	1463 aa		10.74	□□□□□ -0.69
PUDP-204	ENST00000486446	DEPDC5	O75140	1603 aa		10.73	□□□□□ -0.69
PUDP-204	ENST00000486446	VARS2	Q5ST30	1063 aa	Known RBP	10.73	□□□□□ -0.69
PUDP-204	ENST00000486446	LHX6	Q9UPM6	363 aa		10.73	□□□□□ -0.69
PUDP-204	ENST00000486446	NLRP1	Q9C000	1473 aa		10.73	□□□□□ -0.69
PUDP-204	ENST00000486446	ITGAE	P38570	1179 aa		10.72	□□□□□ -0.69
PUDP-204	ENST00000486446	E2F4	Q16254	413 aa		10.72	□□□□□ -0.69
PUDP-204	ENST00000486446	ANO8	Q9HCE9	1232 aa	Predicted RBP	10.72	□□□□□ -0.69
PUDP-204	ENST00000486446	ERVK-7	P63135	1459 aa		10.72	□□□□□ -0.69
PUDP-204	ENST00000486446	UGGT1	Q9NYU2	1555 aa		10.7	□□□□□ -0.7
PUDP-204	ENST00000486446	ANKRD50	Q9ULJ7	1429 aa		10.7	□□□□□ -0.7
PUDP-204	ENST00000486446	MAP3K9	P80192	1104 aa		10.7	□□□□□ -0.7
PUDP-204	ENST00000486446	THEMIS	Q8N1K5	641 aa	Predicted RBP	10.7	□□□□□ -0.7
PUDP-204	ENST00000486446	CFAP65	Q6ZU64	1925 aa	Known RBP	10.7	□□□□□ -0.7
PUDP-204	ENST00000486446	POLR1A	O95602	1720 aa	Predicted RBP	10.7	□□□□□ -0.7
PUDP-204	ENST00000486446	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	10.69	□□□□□ -0.7
PUDP-204	ENST00000486446	EVI5	O60447	810 aa		10.69	□□□□□ -0.7
PUDP-204	ENST00000486446	TOM1	O60784	492 aa		10.69	□□□□□ -0.7
PUDP-204	ENST00000486446	ZNF687	Q8N1G0	1237 aa		10.69	□□□□□ -0.7

Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms