RNA–Protein interactions for RNA: ENST00000486016.1

GCFC2-209, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 3

Gene GCFC2, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-209ENST00000486016 MDM2Q00987 491 aaPredicted RBP10.86□□□□□ -0.67
GCFC2-209ENST00000486016 FAM160A2Q8N612 972 aaPredicted RBP10.86□□□□□ -0.67
GCFC2-209ENST00000486016 BRICD5Q6PL45 260 aa10.85□□□□□ -0.67
GCFC2-209ENST00000486016 TOR4AQ9NXH8 423 aa10.85□□□□□ -0.67
GCFC2-209ENST00000486016 CTC1Q2NKJ3 1217 aa10.84□□□□□ -0.67
GCFC2-209ENST00000486016 CYP4X1Q8N118 509 aa10.84□□□□□ -0.67
GCFC2-209ENST00000486016 ZMYND10O75800 440 aa10.82□□□□□ -0.68
GCFC2-209ENST00000486016 FMNL1O95466 1100 aaPredicted RBP10.82□□□□□ -0.68
GCFC2-209ENST00000486016 BARGINQ6ZT62 677 aa10.82□□□□□ -0.68
GCFC2-209ENST00000486016 STK17AQ9UEE5 414 aa10.82□□□□□ -0.68
GCFC2-209ENST00000486016 CD2BP2O95400 341 aaKnown RBP10.81□□□□□ -0.68
GCFC2-209ENST00000486016 SMCPP49901 116 aaPredicted RBP10.81□□□□□ -0.68
GCFC2-209ENST00000486016 NFX1Q12986 1120 aaKnown RBP10.81□□□□□ -0.68
GCFC2-209ENST00000486016 RNF19BQ6ZMZ0 732 aa10.81□□□□□ -0.68
GCFC2-209ENST00000486016 REPIN1Q9BWE0 567 aaKnown RBP10.81□□□□□ -0.68
GCFC2-209ENST00000486016 FAM217BQ9NTX9 383 aaPredicted RBP10.81□□□□□ -0.68
GCFC2-209ENST00000486016 ZC3H15Q8WU90 426 aaKnown RBP10.8□□□□□ -0.68
GCFC2-209ENST00000486016 GPCPD1Q9NPB8 672 aa10.8□□□□□ -0.68
GCFC2-209ENST00000486016 FCF1Q9Y324 198 aaKnown RBP10.8□□□□□ -0.68
GCFC2-209ENST00000486016 KDM4AO75164 1064 aa10.79□□□□□ -0.68
GCFC2-209ENST00000486016 CLCN1P35523 988 aa10.79□□□□□ -0.68
GCFC2-209ENST00000486016 WIPF1O43516 503 aa10.78□□□□□ -0.68
GCFC2-209ENST00000486016 GRIPAP1Q4V328 841 aa10.78□□□□□ -0.68
GCFC2-209ENST00000486016 MSS51Q4VC12 460 aa10.78□□□□□ -0.68
GCFC2-209ENST00000486016 PRDM9Q9NQV7 894 aa10.78□□□□□ -0.68
GCFC2-209ENST00000486016 INSM1Q01101 510 aaPredicted RBP10.77□□□□□ -0.69
GCFC2-209ENST00000486016 HLA-CQ95604 372 aa10.77□□□□□ -0.69
GCFC2-209ENST00000486016 USP46P62068 366 aa10.76□□□□□ -0.69
GCFC2-209ENST00000486016 TTC24A2A3L6 582 aaPredicted RBP10.75□□□□□ -0.69
GCFC2-209ENST00000486016 HOXA2O43364 376 aa10.74□□□□□ -0.69
GCFC2-209ENST00000486016 Q3C1V9 767 aa10.74□□□□□ -0.69
GCFC2-209ENST00000486016 MMP16P51512 607 aa10.73□□□□□ -0.69
GCFC2-209ENST00000486016 AMHR2Q16671 573 aa10.73□□□□□ -0.69
GCFC2-209ENST00000486016 KRI1Q8N9T8 703 aaKnown RBP10.72□□□□□ -0.69
GCFC2-209ENST00000486016 ZBTB24O43167 697 aaPredicted RBP10.7□□□□□ -0.7
GCFC2-209ENST00000486016 SNRPBP14678 240 aaKnown RBP10.7□□□□□ -0.7
GCFC2-209ENST00000486016 LCE2CQ5TA81 110 aa10.7□□□□□ -0.7
GCFC2-209ENST00000486016 USB1Q9BQ65 265 aaKnown RBP10.7□□□□□ -0.7
GCFC2-209ENST00000486016 ATP13A2Q9NQ11 1180 aa10.7□□□□□ -0.7
GCFC2-209ENST00000486016 TERTO14746 1132 aaKnown RBP10.69□□□□□ -0.7
GCFC2-209ENST00000486016 DXOO77932 396 aaKnown RBP10.69□□□□□ -0.7
GCFC2-209ENST00000486016 SSTR3P32745 418 aaPredicted RBP10.69□□□□□ -0.7
GCFC2-209ENST00000486016 GUCA2AQ02747 115 aa10.69□□□□□ -0.7
GCFC2-209ENST00000486016 WNT7AO00755 349 aa10.67□□□□□ -0.7
GCFC2-209ENST00000486016 SMPD1P17405 629 aa10.67□□□□□ -0.7
GCFC2-209ENST00000486016 SNIP1Q8TAD8 396 aaKnown RBP10.66□□□□□ -0.7
GCFC2-209ENST00000486016 SENP2Q9HC62 589 aa10.66□□□□□ -0.7
GCFC2-209ENST00000486016 PCDHGC3Q9UN70 934 aa10.66□□□□□ -0.7
GCFC2-209ENST00000486016 SPIRE2Q8WWL2 714 aa10.65□□□□□ -0.7
GCFC2-209ENST00000486016 SYMPKQ92797 1274 aaKnown RBP10.65□□□□□ -0.7
GCFC2-209ENST00000486016 GIGYF2Q6Y7W6 1299 aaKnown RBP10.64□□□□□ -0.71
GCFC2-209ENST00000486016 NUTM1Q86Y26 1132 aa10.64□□□□□ -0.71
GCFC2-209ENST00000486016 TRIM47Q96LD4 638 aa10.64□□□□□ -0.71
GCFC2-209ENST00000486016 J3QL48 77 aa10.63□□□□□ -0.71
GCFC2-209ENST00000486016 TRIM66O15016 1216 aa10.63□□□□□ -0.71
GCFC2-209ENST00000486016 TTLL12Q14166 644 aaPredicted RBP10.62□□□□□ -0.71
GCFC2-209ENST00000486016 PARP9Q8IXQ6 854 aa10.62□□□□□ -0.71
GCFC2-209ENST00000486016 FDX1P10109 184 aa10.61□□□□□ -0.71
GCFC2-209ENST00000486016 TRIM32Q13049 653 aa10.61□□□□□ -0.71
GCFC2-209ENST00000486016 MRGPRX2Q96LB1 330 aa10.61□□□□□ -0.71
GCFC2-209ENST00000486016 RETREG3Q86VR2 466 aa10.6□□□□□ -0.71
GCFC2-209ENST00000486016 KIFC2Q96AC6 838 aa10.6□□□□□ -0.71
GCFC2-209ENST00000486016 AK7Q96M32 723 aa10.6□□□□□ -0.71
GCFC2-209ENST00000486016 MOXD2PA6NHM9 499 aa10.59□□□□□ -0.71
GCFC2-209ENST00000486016 JUNDP17535 347 aa10.59□□□□□ -0.71
GCFC2-209ENST00000486016 NDUFV2P19404 249 aa10.59□□□□□ -0.71
GCFC2-209ENST00000486016 HPS1Q92902 700 aa10.59□□□□□ -0.71
GCFC2-209ENST00000486016 MS4A1P11836 297 aa10.57□□□□□ -0.72
GCFC2-209ENST00000486016 BEGAINQ9BUH8 593 aa10.57□□□□□ -0.72
GCFC2-209ENST00000486016 GJA5P36382 358 aa10.54□□□□□ -0.72
GCFC2-209ENST00000486016 SKOR1P84550 965 aa10.54□□□□□ -0.72
GCFC2-209ENST00000486016 SLC16A10Q8TF71 515 aa10.54□□□□□ -0.72
GCFC2-209ENST00000486016 TBC1D2Q9BYX2 928 aa10.54□□□□□ -0.72
GCFC2-209ENST00000486016 FAM181BA6NEQ2 426 aa10.53□□□□□ -0.72
GCFC2-209ENST00000486016 PTCRAQ6ISU1 281 aaPredicted RBP10.53□□□□□ -0.72
GCFC2-209ENST00000486016 C6orf229H3BNL8 230 aa10.52□□□□□ -0.73
GCFC2-209ENST00000486016 CCDC24Q8N4L8 307 aa10.52□□□□□ -0.73
GCFC2-209ENST00000486016 PDE4DQ08499 809 aa10.51□□□□□ -0.73
GCFC2-209ENST00000486016 NUDT12Q9BQG2 462 aa10.51□□□□□ -0.73
GCFC2-209ENST00000486016 SPTLC1O15269 473 aa10.5□□□□□ -0.73
GCFC2-209ENST00000486016 GMPRP36959 345 aa10.5□□□□□ -0.73
GCFC2-209ENST00000486016 RSBN1LQ6PCB5 846 aaPredicted RBP10.5□□□□□ -0.73
GCFC2-209ENST00000486016 SLC24A3Q9HC58 644 aa10.5□□□□□ -0.73
GCFC2-209ENST00000486016 WNT7BP56706 349 aa10.49□□□□□ -0.73
GCFC2-209ENST00000486016 RC3H1Q5TC82 1133 aaKnown RBP10.49□□□□□ -0.73
GCFC2-209ENST00000486016 NXF1Q9UBU9 619 aaKnown RBP10.49□□□□□ -0.73
GCFC2-209ENST00000486016 PCDHB15Q9Y5E8 787 aa10.49□□□□□ -0.73
GCFC2-209ENST00000486016 DESI1Q6ICB0 168 aa10.48□□□□□ -0.73
GCFC2-209ENST00000486016 ZSCAN1Q8NBB4 408 aa10.48□□□□□ -0.73
GCFC2-209ENST00000486016 PRR7Q8TB68 274 aa10.48□□□□□ -0.73
GCFC2-209ENST00000486016 LOC100996750A0A140TA64 210 aa10.47□□□□□ -0.73
GCFC2-209ENST00000486016 SPDYE5A6NIY4 337 aa10.47□□□□□ -0.73
GCFC2-209ENST00000486016 MTMR2Q13614 643 aa10.47□□□□□ -0.73
GCFC2-209ENST00000486016 DIXDC1Q155Q3 683 aa10.47□□□□□ -0.73
GCFC2-209ENST00000486016 PTPRNQ16849 979 aa10.47□□□□□ -0.73
GCFC2-209ENST00000486016 KRTAP4-6Q9BYQ5 205 aa10.47□□□□□ -0.73
GCFC2-209ENST00000486016 EVA1BQ9NVM1 165 aa10.47□□□□□ -0.73
GCFC2-209ENST00000486016 ALDH1A1P00352 501 aa10.46□□□□□ -0.73
GCFC2-209ENST00000486016 CCNYL3P0C7X3 344 aa10.46□□□□□ -0.73
GCFC2-209ENST00000486016 NPAS3Q8IXF0 933 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms