RNA–Protein interactions for RNA: ENST00000485938.3

CLN5-202, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 2

Gene CLN5, Length 2,341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-202ENST00000485938 MORC1Q86VD1 984 aa28.99■■■□□ 2.23
CLN5-202ENST00000485938 NOS1P29475 1434 aa28.98■■■□□ 2.23
CLN5-202ENST00000485938 ZC3H13Q5T200 1668 aaKnown RBP28.98■■■□□ 2.23
CLN5-202ENST00000485938 RUNDC1Q96C34 613 aa28.98■■■□□ 2.23
CLN5-202ENST00000485938 LMTK2Q8IWU2 1503 aa28.98■■■□□ 2.23
CLN5-202ENST00000485938 PHF23Q9BUL5 403 aaPredicted RBP28.97■■■□□ 2.23
CLN5-202ENST00000485938 FRAT2O75474 233 aaPredicted RBP28.96■■■□□ 2.23
CLN5-202ENST00000485938 RARSP54136 660 aaKnown RBP28.95■■■□□ 2.23
CLN5-202ENST00000485938 RTN4Q9NQC3 1192 aaKnown RBP28.95■■■□□ 2.23
CLN5-202ENST00000485938 QRICH2Q9H0J4 1663 aa28.94■■■□□ 2.22
CLN5-202ENST00000485938 TCP11L2Q8N4U5 519 aa28.93■■■□□ 2.22
CLN5-202ENST00000485938 RRP7AQ9Y3A4 280 aaKnown RBP28.93■■■□□ 2.22
CLN5-202ENST00000485938 KIDINS220Q9ULH0 1771 aa28.93■■■□□ 2.22
CLN5-202ENST00000485938 SEC24BO95487 1268 aa28.93■■■□□ 2.22
CLN5-202ENST00000485938 NEUROD2Q15784 382 aa28.93■■■□□ 2.22
CLN5-202ENST00000485938 SLC12A5Q9H2X9 1139 aa28.93■■■□□ 2.22
CLN5-202ENST00000485938 TNNT2P45379 298 aaPredicted RBP28.92■■■□□ 2.22
CLN5-202ENST00000485938 AAMPQ13685 434 aa28.92■■■□□ 2.22
CLN5-202ENST00000485938 BRPF3Q9ULD4 1205 aa28.92■■■□□ 2.22
CLN5-202ENST00000485938 USP32Q8NFA0 1604 aa28.92■■■□□ 2.22
CLN5-202ENST00000485938 WDR63Q8IWG1 891 aa28.91■■■□□ 2.22
CLN5-202ENST00000485938 TRAK1Q9UPV9 953 aa28.91■■■□□ 2.22
CLN5-202ENST00000485938 NLRP1Q9C000 1473 aa28.9■■■□□ 2.22
CLN5-202ENST00000485938 ADGRB1O14514 1584 aa28.9■■■□□ 2.22
CLN5-202ENST00000485938 PPLO60437 1756 aa28.9■■■□□ 2.22
CLN5-202ENST00000485938 C14orf93Q9H972 538 aaKnown RBP28.89■■■□□ 2.22
CLN5-202ENST00000485938 NPM1P06748 294 aaKnown RBP eCLIP28.89■■■□□ 2.22
CLN5-202ENST00000485938 PMFBP1Q8TBY8 1022 aa28.89■■■□□ 2.22
CLN5-202ENST00000485938 ZNF518AQ6AHZ1 1483 aa28.89■■■□□ 2.21
CLN5-202ENST00000485938 RLBP1P12271 317 aa28.87■■■□□ 2.21
CLN5-202ENST00000485938 CCDC27Q2M243 656 aa28.87■■■□□ 2.21
CLN5-202ENST00000485938 PCDHB15Q9Y5E8 787 aa28.87■■■□□ 2.21
CLN5-202ENST00000485938 CHGAP10645 457 aaKnown RBP28.86■■■□□ 2.21
CLN5-202ENST00000485938 ZMYM3Q14202 1370 aa28.85■■■□□ 2.21
CLN5-202ENST00000485938 MTHFSP49914 203 aa28.85■■■□□ 2.21
CLN5-202ENST00000485938 TNNQ9UQP3 1299 aa28.85■■■□□ 2.21
CLN5-202ENST00000485938 NPATQ14207 1427 aa28.82■■■□□ 2.2
CLN5-202ENST00000485938 BECN1Q14457 450 aa28.82■■■□□ 2.2
CLN5-202ENST00000485938 CFAP53Q96M91 514 aa28.82■■■□□ 2.2
CLN5-202ENST00000485938 NCBP3Q53F19 620 aaKnown RBP28.81■■■□□ 2.2
CLN5-202ENST00000485938 TMEM132EQ6IEE7 984 aa28.81■■■□□ 2.2
CLN5-202ENST00000485938 BCL2L13Q9BXK5 485 aa28.8■■■□□ 2.2
CLN5-202ENST00000485938 PDZRN3Q9UPQ7 1066 aa28.78■■■□□ 2.2
CLN5-202ENST00000485938 ANO8Q9HCE9 1232 aaPredicted RBP28.78■■■□□ 2.2
CLN5-202ENST00000485938 MYH16Q9H6N6 1097 aa28.77■■■□□ 2.2
CLN5-202ENST00000485938 CFAP65Q6ZU64 1925 aaKnown RBP28.77■■■□□ 2.2
CLN5-202ENST00000485938 RPGRIP1LQ68CZ1 1315 aa28.76■■■□□ 2.2
CLN5-202ENST00000485938 PUS7Q96PZ0 661 aaKnown RBP28.75■■■□□ 2.19
CLN5-202ENST00000485938 RWDD1Q9H446 243 aaPredicted RBP28.75■■■□□ 2.19
CLN5-202ENST00000485938 ADGRB2O60241 1585 aa28.75■■■□□ 2.19
CLN5-202ENST00000485938 NSD2O96028 1365 aa28.75■■■□□ 2.19
CLN5-202ENST00000485938 TBC1D32Q96NH3 1257 aa28.74■■■□□ 2.19
CLN5-202ENST00000485938 ANKRD36BQ8N2N9 1353 aa28.74■■■□□ 2.19
CLN5-202ENST00000485938 GLI2P10070 1586 aa28.73■■■□□ 2.19
CLN5-202ENST00000485938 TULP4Q9NRJ4 1543 aa28.73■■■□□ 2.19
CLN5-202ENST00000485938 FRMPD1Q5SYB0 1578 aa28.73■■■□□ 2.19
CLN5-202ENST00000485938 UPF2Q9HAU5 1272 aaKnown RBP28.72■■■□□ 2.19
CLN5-202ENST00000485938 MVPQ14764 893 aaKnown RBP28.71■■■□□ 2.19
CLN5-202ENST00000485938 ANTXR1Q9H6X2 564 aa28.71■■■□□ 2.19
CLN5-202ENST00000485938 EVC2Q86UK5 1308 aa28.71■■■□□ 2.19
CLN5-202ENST00000485938 U2AF1L5P0DN76 240 aaPredicted RBP28.7■■■□□ 2.19
CLN5-202ENST00000485938 U2AF1Q01081 240 aaKnown RBP eCLIP28.7■■■□□ 2.19
CLN5-202ENST00000485938 ARHGEF28Q8N1W1 1705 aaKnown RBP28.7■■■□□ 2.19
CLN5-202ENST00000485938 HECW2Q9P2P5 1572 aa28.7■■■□□ 2.18
CLN5-202ENST00000485938 SLKQ9H2G2 1235 aaPredicted RBP28.69■■■□□ 2.18
CLN5-202ENST00000485938 CD109Q6YHK3 1445 aa28.68■■■□□ 2.18
CLN5-202ENST00000485938 ZKSCAN2Q63HK3 967 aa28.68■■■□□ 2.18
CLN5-202ENST00000485938 CT47B1P0C2W7 299 aaPredicted RBP28.66■■■□□ 2.18
CLN5-202ENST00000485938 GGT6Q6P531 493 aa28.66■■■□□ 2.18
CLN5-202ENST00000485938 ABCC3O15438 1527 aa28.66■■■□□ 2.18
CLN5-202ENST00000485938 DZIP1LQ8IYY4 767 aaKnown RBP28.65■■■□□ 2.18
CLN5-202ENST00000485938 POGKQ9P215 609 aa28.65■■■□□ 2.18
CLN5-202ENST00000485938 POGZQ7Z3K3 1410 aa28.65■■■□□ 2.18
CLN5-202ENST00000485938 TBC1D2Q9BYX2 928 aa28.65■■■□□ 2.18
CLN5-202ENST00000485938 MLH3Q9UHC1 1453 aa28.65■■■□□ 2.18
CLN5-202ENST00000485938 FTSJ3Q8IY81 847 aaKnown RBP28.63■■■□□ 2.17
CLN5-202ENST00000485938 CAMSAP1Q5T5Y3 1602 aa28.63■■■□□ 2.17
CLN5-202ENST00000485938 CYB5RLQ6IPT4 315 aa28.62■■■□□ 2.17
CLN5-202ENST00000485938 TSR2Q969E8 191 aaKnown RBP28.62■■■□□ 2.17
CLN5-202ENST00000485938 NEXMIFQ5QGS0 1516 aa28.61■■■□□ 2.17
CLN5-202ENST00000485938 CABP2Q9NPB3 220 aa28.61■■■□□ 2.17
CLN5-202ENST00000485938 SIGLEC1Q9BZZ2 1709 aa28.61■■■□□ 2.17
CLN5-202ENST00000485938 PIK3C2BO00750 1634 aa28.6■■■□□ 2.17
CLN5-202ENST00000485938 PLEKHF1Q96S99 279 aa28.6■■■□□ 2.17
CLN5-202ENST00000485938 ABCC11Q96J66 1382 aa28.59■■■□□ 2.17
CLN5-202ENST00000485938 VGFO15240 615 aaPredicted RBP28.59■■■□□ 2.17
CLN5-202ENST00000485938 SMC4Q9NTJ3 1288 aa28.58■■■□□ 2.17
CLN5-202ENST00000485938 EXOSC9Q06265 439 aaKnown RBP28.58■■■□□ 2.17
CLN5-202ENST00000485938 NUTM2DQ5VT03 806 aaPredicted RBP28.58■■■□□ 2.17
CLN5-202ENST00000485938 CFAP74Q9C0B2 1584 aa28.58■■■□□ 2.17
CLN5-202ENST00000485938 COL3A1P02461 1466 aaPredicted RBP28.57■■■□□ 2.16
CLN5-202ENST00000485938 A0A1W2PP64 1363 aa28.57■■■□□ 2.16
CLN5-202ENST00000485938 TRIM27P14373 513 aa28.57■■■□□ 2.16
CLN5-202ENST00000485938 TMPOP42166 694 aaKnown RBP28.57■■■□□ 2.16
CLN5-202ENST00000485938 HDAC1Q13547 482 aaPredicted RBP28.57■■■□□ 2.16
CLN5-202ENST00000485938 TRIM35Q9UPQ4 493 aa28.57■■■□□ 2.16
CLN5-202ENST00000485938 SSH1Q8WYL5 1049 aa28.54■■■□□ 2.16
CLN5-202ENST00000485938 DDX19BQ9UMR2 479 aa28.53■■■□□ 2.16
CLN5-202ENST00000485938 U2SURPO15042 1029 aaKnown RBP28.53■■■□□ 2.16
CLN5-202ENST00000485938 IL16Q14005 1332 aa28.52■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms