RNA–Protein interactions for RNA: ENST00000485810.1

PRPF38B-205, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 2

Gene PRPF38B, Length 1,352 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-205ENST00000485810 CYP4X1Q8N118 509 aa7.17□□□□□ -1.26
PRPF38B-205ENST00000485810 AXIN1O15169 862 aa7.16□□□□□ -1.26
PRPF38B-205ENST00000485810 SMPD1P17405 629 aa7.16□□□□□ -1.26
PRPF38B-205ENST00000485810 MMP16P51512 607 aa7.15□□□□□ -1.26
PRPF38B-205ENST00000485810 SMYD5Q6GMV2 418 aa7.15□□□□□ -1.26
PRPF38B-205ENST00000485810 HLA-CQ95604 372 aa7.15□□□□□ -1.26
PRPF38B-205ENST00000485810 WNT7AO00755 349 aa7.14□□□□□ -1.27
PRPF38B-205ENST00000485810 CD46P15529 392 aa7.14□□□□□ -1.27
PRPF38B-205ENST00000485810 NFX1Q12986 1120 aaKnown RBP7.14□□□□□ -1.27
PRPF38B-205ENST00000485810 SULF1Q8IWU6 871 aa7.14□□□□□ -1.27
PRPF38B-205ENST00000485810 TTBK1Q5TCY1 1321 aaPredicted RBP7.14□□□□□ -1.27
PRPF38B-205ENST00000485810 J3QL48 77 aa7.13□□□□□ -1.27
PRPF38B-205ENST00000485810 CTC1Q2NKJ3 1217 aa7.13□□□□□ -1.27
PRPF38B-205ENST00000485810 C11orf95C9JLR9 678 aaPredicted RBP7.12□□□□□ -1.27
PRPF38B-205ENST00000485810 DXOO77932 396 aaKnown RBP7.12□□□□□ -1.27
PRPF38B-205ENST00000485810 TRIM32Q13049 653 aa7.12□□□□□ -1.27
PRPF38B-205ENST00000485810 MRGPRX2Q96LB1 330 aa7.12□□□□□ -1.27
PRPF38B-205ENST00000485810 SNRPBP14678 240 aaKnown RBP7.11□□□□□ -1.27
PRPF38B-205ENST00000485810 GPIHBP1Q8IV16 184 aa7.11□□□□□ -1.27
PRPF38B-205ENST00000485810 SNIP1Q8TAD8 396 aaKnown RBP7.11□□□□□ -1.27
PRPF38B-205ENST00000485810 TTC24A2A3L6 582 aaPredicted RBP7.1□□□□□ -1.27
PRPF38B-205ENST00000485810 WFS1O76024 890 aa7.1□□□□□ -1.27
PRPF38B-205ENST00000485810 SKOR1P84550 965 aa7.1□□□□□ -1.27
PRPF38B-205ENST00000485810 ZBTB24O43167 697 aaPredicted RBP7.09□□□□□ -1.27
PRPF38B-205ENST00000485810 HPS1Q92902 700 aa7.09□□□□□ -1.27
PRPF38B-205ENST00000485810 USB1Q9BQ65 265 aaKnown RBP7.09□□□□□ -1.27
PRPF38B-205ENST00000485810 ATP13A2Q9NQ11 1180 aa7.09□□□□□ -1.27
PRPF38B-205ENST00000485810 KDM4AO75164 1064 aa7.08□□□□□ -1.28
PRPF38B-205ENST00000485810 Q3C1V9 767 aa7.08□□□□□ -1.28
PRPF38B-205ENST00000485810 GUCA2AQ02747 115 aa7.08□□□□□ -1.28
PRPF38B-205ENST00000485810 GRIPAP1Q4V328 841 aa7.08□□□□□ -1.28
PRPF38B-205ENST00000485810 IRF6O14896 467 aa7.07□□□□□ -1.28
PRPF38B-205ENST00000485810 WIPF1O43516 503 aa7.07□□□□□ -1.28
PRPF38B-205ENST00000485810 MAP2K5Q13163 448 aa7.07□□□□□ -1.28
PRPF38B-205ENST00000485810 MDM2Q00987 491 aaPredicted RBP7.06□□□□□ -1.28
PRPF38B-205ENST00000485810 RC3H1Q5TC82 1133 aaKnown RBP7.06□□□□□ -1.28
PRPF38B-205ENST00000485810 SYMPKQ92797 1274 aaKnown RBP7.06□□□□□ -1.28
PRPF38B-205ENST00000485810 HOXA2O43364 376 aa7.05□□□□□ -1.28
PRPF38B-205ENST00000485810 PTCRAQ6ISU1 281 aaPredicted RBP7.05□□□□□ -1.28
PRPF38B-205ENST00000485810 TRIM47Q96LD4 638 aa7.05□□□□□ -1.28
PRPF38B-205ENST00000485810 STK17AQ9UEE5 414 aa7.04□□□□□ -1.28
PRPF38B-205ENST00000485810 TERTO14746 1132 aaKnown RBP7.03□□□□□ -1.28
PRPF38B-205ENST00000485810 SIAH2O43255 324 aa7.03□□□□□ -1.28
PRPF38B-205ENST00000485810 INSM1Q01101 510 aaPredicted RBP7.03□□□□□ -1.28
PRPF38B-205ENST00000485810 CCDC24Q8N4L8 307 aa7.03□□□□□ -1.28
PRPF38B-205ENST00000485810 JUNDP17535 347 aa7.02□□□□□ -1.29
PRPF38B-205ENST00000485810 WNT7BP56706 349 aa7.02□□□□□ -1.29
PRPF38B-205ENST00000485810 USP46P62068 366 aa7.02□□□□□ -1.29
PRPF38B-205ENST00000485810 MINK1Q8N4C8 1332 aaPredicted RBP7.01□□□□□ -1.29
PRPF38B-205ENST00000485810 CCDC102AQ96A19 550 aa7.01□□□□□ -1.29
PRPF38B-205ENST00000485810 ARXQ96QS3 562 aa7.01□□□□□ -1.29
PRPF38B-205ENST00000485810 REPIN1Q9BWE0 567 aaKnown RBP7.01□□□□□ -1.29
PRPF38B-205ENST00000485810 FAM217BQ9NTX9 383 aaPredicted RBP7.01□□□□□ -1.29
PRPF38B-205ENST00000485810 PCDHGC3Q9UN70 934 aa7.01□□□□□ -1.29
PRPF38B-205ENST00000485810 TRIM46Q7Z4K8 759 aa6.99□□□□□ -1.29
PRPF38B-205ENST00000485810 SENP2Q9HC62 589 aa6.99□□□□□ -1.29
PRPF38B-205ENST00000485810 ALDH1A1P00352 501 aa6.98□□□□□ -1.29
PRPF38B-205ENST00000485810 LORP23490 312 aaPredicted RBP6.98□□□□□ -1.29
PRPF38B-205ENST00000485810 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.96□□□□□ -1.29
PRPF38B-205ENST00000485810 RETREG3Q86VR2 466 aa6.96□□□□□ -1.29
PRPF38B-205ENST00000485810 GPCPD1Q9NPB8 672 aa6.96□□□□□ -1.29
PRPF38B-205ENST00000485810 FAM181BA6NEQ2 426 aa6.95□□□□□ -1.3
PRPF38B-205ENST00000485810 TULP1O00294 542 aaPredicted RBP6.95□□□□□ -1.3
PRPF38B-205ENST00000485810 BMP1P13497 986 aa6.95□□□□□ -1.3
PRPF38B-205ENST00000485810 SH3BP2P78314 561 aa6.95□□□□□ -1.3
PRPF38B-205ENST00000485810 KIFC2Q96AC6 838 aa6.95□□□□□ -1.3
PRPF38B-205ENST00000485810 NUDT12Q9BQG2 462 aa6.95□□□□□ -1.3
PRPF38B-205ENST00000485810 FDX1P10109 184 aa6.94□□□□□ -1.3
PRPF38B-205ENST00000485810 CLCN1P35523 988 aa6.94□□□□□ -1.3
PRPF38B-205ENST00000485810 ERICH6Q7L0X2 663 aa6.94□□□□□ -1.3
PRPF38B-205ENST00000485810 NDUFV2P19404 249 aa6.93□□□□□ -1.3
PRPF38B-205ENST00000485810 EHBP1Q8NDI1 1231 aa6.93□□□□□ -1.3
PRPF38B-205ENST00000485810 CAPN5O15484 640 aaPredicted RBP6.92□□□□□ -1.3
PRPF38B-205ENST00000485810 GMPRP36959 345 aa6.92□□□□□ -1.3
PRPF38B-205ENST00000485810 SPIRE2Q8WWL2 714 aa6.92□□□□□ -1.3
PRPF38B-205ENST00000485810 NXF1Q9UBU9 619 aaKnown RBP6.92□□□□□ -1.3
PRPF38B-205ENST00000485810 MOXD2PA6NHM9 499 aa6.91□□□□□ -1.3
PRPF38B-205ENST00000485810 CCNYL3P0C7X3 344 aa6.91□□□□□ -1.3
PRPF38B-205ENST00000485810 MS4A1P11836 297 aa6.91□□□□□ -1.3
PRPF38B-205ENST00000485810 NUTM1Q86Y26 1132 aa6.91□□□□□ -1.3
PRPF38B-205ENST00000485810 EVA1BQ9NVM1 165 aa6.91□□□□□ -1.3
PRPF38B-205ENST00000485810 C6orf229H3BNL8 230 aa6.9□□□□□ -1.31
PRPF38B-205ENST00000485810 SSTR3P32745 418 aaPredicted RBP6.9□□□□□ -1.31
PRPF38B-205ENST00000485810 RANGAP1P46060 587 aaPredicted RBP6.9□□□□□ -1.31
PRPF38B-205ENST00000485810 VEGFBP49765 207 aa6.9□□□□□ -1.31
PRPF38B-205ENST00000485810 BAP1Q92560 729 aa6.9□□□□□ -1.31
PRPF38B-205ENST00000485810 UNC93B1Q9H1C4 597 aa6.9□□□□□ -1.31
PRPF38B-205ENST00000485810 ERBB4Q15303 1308 aa6.9□□□□□ -1.31
PRPF38B-205ENST00000485810 PTPRNQ16849 979 aa6.89□□□□□ -1.31
PRPF38B-205ENST00000485810 LINC01559Q495D7 138 aa6.89□□□□□ -1.31
PRPF38B-205ENST00000485810 TLL2Q9Y6L7 1015 aa6.89□□□□□ -1.31
PRPF38B-205ENST00000485810 LOC100996750A0A140TA64 210 aa6.88□□□□□ -1.31
PRPF38B-205ENST00000485810 KCNH2Q12809 1159 aa6.88□□□□□ -1.31
PRPF38B-205ENST00000485810 ZFP42Q96MM3 310 aa6.88□□□□□ -1.31
PRPF38B-205ENST00000485810 KLF16Q9BXK1 252 aaPredicted RBP6.88□□□□□ -1.31
PRPF38B-205ENST00000485810 KRTAP4-6Q9BYQ5 205 aa6.88□□□□□ -1.31
PRPF38B-205ENST00000485810 WASF2Q9Y6W5 498 aa6.88□□□□□ -1.31
PRPF38B-205ENST00000485810 H3BM21 787 aa6.87□□□□□ -1.31
PRPF38B-205ENST00000485810 PRKCSHP14314 528 aaPredicted RBP6.87□□□□□ -1.31
PRPF38B-205ENST00000485810 PRR7Q8TB68 274 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms