RNA–Protein interactions for RNA: ENST00000485612.5

SSR4-210, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 701 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-210ENST00000485612 HRCP23327 699 aa18.78■□□□□ 0.6
SSR4-210ENST00000485612 RALGAPBQ86X10 1494 aa18.77■□□□□ 0.59
SSR4-210ENST00000485612 NPHP3Q7Z494 1330 aa18.76■□□□□ 0.59
SSR4-210ENST00000485612 ESCO1Q5FWF5 840 aa18.75■□□□□ 0.59
SSR4-210ENST00000485612 SEPT12Q8IYM1 358 aa18.75■□□□□ 0.59
SSR4-210ENST00000485612 GLI3P10071 1580 aa18.73■□□□□ 0.59
SSR4-210ENST00000485612 NUP155O75694 1391 aa18.73■□□□□ 0.59
SSR4-210ENST00000485612 ROBO2Q9HCK4 1378 aa18.73■□□□□ 0.59
SSR4-210ENST00000485612 XPCQ01831 940 aaPredicted RBP18.73■□□□□ 0.59
SSR4-210ENST00000485612 FOXO3O43524 673 aa18.72■□□□□ 0.59
SSR4-210ENST00000485612 MARF1Q9Y4F3 1742 aaKnown RBP18.71■□□□□ 0.59
SSR4-210ENST00000485612 BAG6P46379 1132 aa18.71■□□□□ 0.59
SSR4-210ENST00000485612 SPHKAPQ2M3C7 1700 aa18.71■□□□□ 0.59
SSR4-210ENST00000485612 SLIT2O94813 1529 aa18.7■□□□□ 0.58
SSR4-210ENST00000485612 KRT27Q7Z3Y8 459 aa18.7■□□□□ 0.58
SSR4-210ENST00000485612 PXDNQ92626 1479 aa18.7■□□□□ 0.58
SSR4-210ENST00000485612 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.69■□□□□ 0.58
SSR4-210ENST00000485612 BRWD3Q6RI45 1802 aa18.69■□□□□ 0.58
SSR4-210ENST00000485612 LRPPRCP42704 1394 aaKnown RBP18.68■□□□□ 0.58
SSR4-210ENST00000485612 ONECUT3O60422 494 aaPredicted RBP18.67■□□□□ 0.58
SSR4-210ENST00000485612 VPS72Q15906 364 aa18.67■□□□□ 0.58
SSR4-210ENST00000485612 ROCK1Q13464 1354 aa18.67■□□□□ 0.58
SSR4-210ENST00000485612 YY1P25490 414 aa18.66■□□□□ 0.58
SSR4-210ENST00000485612 CCDC9Q9Y3X0 531 aaKnown RBP18.66■□□□□ 0.58
SSR4-210ENST00000485612 HFM1A2PYH4 1435 aa18.66■□□□□ 0.58
SSR4-210ENST00000485612 PPARGC1BQ86YN6 1023 aaKnown RBP18.65■□□□□ 0.58
SSR4-210ENST00000485612 NEXMIFQ5QGS0 1516 aa18.64■□□□□ 0.58
SSR4-210ENST00000485612 R3HDM1Q15032 1099 aaKnown RBP18.64■□□□□ 0.57
SSR4-210ENST00000485612 VGFO15240 615 aaPredicted RBP18.63■□□□□ 0.57
SSR4-210ENST00000485612 ITGAEP38570 1179 aa18.63■□□□□ 0.57
SSR4-210ENST00000485612 EN1Q05925 392 aaPredicted RBP18.63■□□□□ 0.57
SSR4-210ENST00000485612 HAP1P54257 671 aaPredicted RBP18.62■□□□□ 0.57
SSR4-210ENST00000485612 SPATA31A3Q5VYP0 1347 aa18.62■□□□□ 0.57
SSR4-210ENST00000485612 A0A0G2JS52 829 aa18.61■□□□□ 0.57
SSR4-210ENST00000485612 NUTM2FA1L443 756 aa18.61■□□□□ 0.57
SSR4-210ENST00000485612 MYT1Q01538 1121 aa18.61■□□□□ 0.57
SSR4-210ENST00000485612 PRAG1Q86YV5 1406 aa18.6■□□□□ 0.57
SSR4-210ENST00000485612 KIF1BO60333 1816 aa18.59■□□□□ 0.57
SSR4-210ENST00000485612 KRT28Q7Z3Y7 464 aa18.58■□□□□ 0.56
SSR4-210ENST00000485612 CLTCL1P53675 1640 aa18.58■□□□□ 0.56
SSR4-210ENST00000485612 USP32Q8NFA0 1604 aa18.56■□□□□ 0.56
SSR4-210ENST00000485612 CDC42BPGQ6DT37 1551 aa18.56■□□□□ 0.56
SSR4-210ENST00000485612 PLEKHG5O94827 1062 aa18.56■□□□□ 0.56
SSR4-210ENST00000485612 CABLES1Q8TDN4 633 aa18.56■□□□□ 0.56
SSR4-210ENST00000485612 FAM98CQ17RN3 349 aaKnown RBP18.55■□□□□ 0.56
SSR4-210ENST00000485612 NAIPQ13075 1403 aa18.55■□□□□ 0.56
SSR4-210ENST00000485612 CCDC144AA2RUR9 1427 aa18.53■□□□□ 0.56
SSR4-210ENST00000485612 FAM83GA6ND36 823 aa18.52■□□□□ 0.56
SSR4-210ENST00000485612 EZH2Q15910 746 aaKnown RBP18.52■□□□□ 0.56
SSR4-210ENST00000485612 FAM182BQ5T319 152 aa18.52■□□□□ 0.56
SSR4-210ENST00000485612 WAPLQ7Z5K2 1190 aa18.52■□□□□ 0.56
SSR4-210ENST00000485612 RPGRIP1LQ68CZ1 1315 aa18.51■□□□□ 0.55
SSR4-210ENST00000485612 PSME1Q06323 249 aa18.51■□□□□ 0.55
SSR4-210ENST00000485612 STK26Q9P289 416 aa18.5■□□□□ 0.55
SSR4-210ENST00000485612 NWD2Q9ULI1 1742 aa18.49■□□□□ 0.55
SSR4-210ENST00000485612 LMOD2Q6P5Q4 547 aa18.49■□□□□ 0.55
SSR4-210ENST00000485612 DISP2A7MBM2 1401 aa18.49■□□□□ 0.55
SSR4-210ENST00000485612 PLCH1Q4KWH8 1693 aa18.48■□□□□ 0.55
SSR4-210ENST00000485612 DCAF8L1A6NGE4 600 aa18.48■□□□□ 0.55
SSR4-210ENST00000485612 RGPD1P0DJD0 1748 aa18.48■□□□□ 0.55
SSR4-210ENST00000485612 TNS3Q68CZ2 1445 aa18.48■□□□□ 0.55
SSR4-210ENST00000485612 RRBP1Q9P2E9 1410 aaKnown RBP18.48■□□□□ 0.55
SSR4-210ENST00000485612 CAMKK2Q96RR4 588 aa18.47■□□□□ 0.55
SSR4-210ENST00000485612 BTG4Q9NY30 223 aa18.46■□□□□ 0.55
SSR4-210ENST00000485612 PHF8Q9UPP1 1060 aa18.45■□□□□ 0.54
SSR4-210ENST00000485612 PPLO60437 1756 aa18.45■□□□□ 0.54
SSR4-210ENST00000485612 KIF1AQ12756 1690 aa18.44■□□□□ 0.54
SSR4-210ENST00000485612 SBNO1A3KN83 1393 aa18.43■□□□□ 0.54
SSR4-210ENST00000485612 PLEKHH1Q9ULM0 1364 aa18.43■□□□□ 0.54
SSR4-210ENST00000485612 TRIM37O94972 964 aa18.43■□□□□ 0.54
SSR4-210ENST00000485612 ARHGEF10O15013 1369 aa18.42■□□□□ 0.54
SSR4-210ENST00000485612 PPP1R1BQ9UD71 204 aaPredicted RBP18.42■□□□□ 0.54
SSR4-210ENST00000485612 TECPR2O15040 1411 aa18.41■□□□□ 0.54
SSR4-210ENST00000485612 APBA3O96018 575 aa18.41■□□□□ 0.54
SSR4-210ENST00000485612 SPATA31A5Q5VU36 1347 aa18.41■□□□□ 0.54
SSR4-210ENST00000485612 SPATA31A7Q8IWB4 1347 aa18.41■□□□□ 0.54
SSR4-210ENST00000485612 NBPF8Q3BBV2 869 aa18.4■□□□□ 0.54
SSR4-210ENST00000485612 NBPF14Q5TI25 921 aa18.4■□□□□ 0.54
SSR4-210ENST00000485612 FAM196AQ6ZSG2 479 aa18.4■□□□□ 0.54
SSR4-210ENST00000485612 ABCC11Q96J66 1382 aa18.4■□□□□ 0.54
SSR4-210ENST00000485612 FMN2Q9NZ56 1722 aa18.4■□□□□ 0.54
SSR4-210ENST00000485612 TMEM132EQ6IEE7 984 aa18.39■□□□□ 0.53
SSR4-210ENST00000485612 SPON1Q9HCB6 807 aa18.39■□□□□ 0.53
SSR4-210ENST00000485612 ADGRF5Q8IZF2 1346 aa18.39■□□□□ 0.53
SSR4-210ENST00000485612 PARD3Q8TEW0 1356 aa18.39■□□□□ 0.53
SSR4-210ENST00000485612 NRAPQ86VF7 1730 aa18.38■□□□□ 0.53
SSR4-210ENST00000485612 TNS1Q9HBL0 1735 aaKnown RBP18.38■□□□□ 0.53
SSR4-210ENST00000485612 KCNQ2O43526 872 aa18.36■□□□□ 0.53
SSR4-210ENST00000485612 ADGRB2O60241 1585 aa18.36■□□□□ 0.53
SSR4-210ENST00000485612 ABCA3Q99758 1704 aa18.36■□□□□ 0.53
SSR4-210ENST00000485612 IFT172Q9UG01 1749 aa18.36■□□□□ 0.53
SSR4-210ENST00000485612 NRXN1Q9ULB1 1477 aa18.35■□□□□ 0.53
SSR4-210ENST00000485612 NINLQ9Y2I6 1382 aa18.35■□□□□ 0.53
SSR4-210ENST00000485612 IFFO2Q5TF58 517 aa18.35■□□□□ 0.53
SSR4-210ENST00000485612 PMFBP1Q8TBY8 1022 aa18.34■□□□□ 0.53
SSR4-210ENST00000485612 SENP3-EIF4A1A0A087X0R7 540 aa18.33■□□□□ 0.52
SSR4-210ENST00000485612 SIRT1Q96EB6 747 aa18.33■□□□□ 0.52
SSR4-210ENST00000485612 THSD7AQ9UPZ6 1657 aa18.33■□□□□ 0.52
SSR4-210ENST00000485612 COL14A1Q05707 1796 aaKnown RBP18.32■□□□□ 0.52
SSR4-210ENST00000485612 ZNF784Q8NCA9 323 aaPredicted RBP18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms