RNA–Protein interactions for RNA: ENST00000485091.5

CCDC78-214, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,734 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-214ENST00000485091 EVC2Q86UK5 1308 aa24.17■■□□□ 1.46
CCDC78-214ENST00000485091 PIK3R4Q99570 1358 aa24.17■■□□□ 1.46
CCDC78-214ENST00000485091 KCNA6P17658 529 aa24.16■■□□□ 1.46
CCDC78-214ENST00000485091 FAM135BQ49AJ0 1406 aa24.16■■□□□ 1.46
CCDC78-214ENST00000485091 TULP4Q9NRJ4 1543 aa24.14■■□□□ 1.45
CCDC78-214ENST00000485091 CABP2Q9NPB3 220 aa24.13■■□□□ 1.45
CCDC78-214ENST00000485091 XRN1Q8IZH2 1706 aaKnown RBP24.12■■□□□ 1.45
CCDC78-214ENST00000485091 SRPK2P78362 688 aaKnown RBP24.12■■□□□ 1.45
CCDC78-214ENST00000485091 CHD2O14647 1828 aaKnown RBP24.11■■□□□ 1.45
CCDC78-214ENST00000485091 PTCH1Q13635 1447 aa24.1■■□□□ 1.45
CCDC78-214ENST00000485091 MIER1Q8N108 512 aa24.1■■□□□ 1.45
CCDC78-214ENST00000485091 CDK19Q9BWU1 502 aa24.1■■□□□ 1.45
CCDC78-214ENST00000485091 TMC1Q8TDI8 760 aa24.08■■□□□ 1.45
CCDC78-214ENST00000485091 RBM33Q96EV2 1170 aaKnown RBP24.07■■□□□ 1.44
CCDC78-214ENST00000485091 PANK3Q9H999 370 aa24.07■■□□□ 1.44
CCDC78-214ENST00000485091 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.06■■□□□ 1.44
CCDC78-214ENST00000485091 CNGB1Q14028 1251 aaPredicted RBP24.06■■□□□ 1.44
CCDC78-214ENST00000485091 WASLO00401 505 aaPredicted RBP24.05■■□□□ 1.44
CCDC78-214ENST00000485091 MYOM1P52179 1685 aa24.04■■□□□ 1.44
CCDC78-214ENST00000485091 ANP32CO43423 234 aa24.02■■□□□ 1.44
CCDC78-214ENST00000485091 SLC12A5Q9H2X9 1139 aa24.02■■□□□ 1.44
CCDC78-214ENST00000485091 PUS7Q96PZ0 661 aaKnown RBP24.01■■□□□ 1.43
CCDC78-214ENST00000485091 NUTM2FA1L443 756 aa24■■□□□ 1.43
CCDC78-214ENST00000485091 NWD1Q149M9 1564 aa23.99■■□□□ 1.43
CCDC78-214ENST00000485091 PROSER2Q86WR7 435 aaPredicted RBP23.99■■□□□ 1.43
CCDC78-214ENST00000485091 ATAD2Q6PL18 1390 aa23.99■■□□□ 1.43
CCDC78-214ENST00000485091 C14orf37Q86TY3 774 aa23.98■■□□□ 1.43
CCDC78-214ENST00000485091 ADGRB2O60241 1585 aa23.96■■□□□ 1.43
CCDC78-214ENST00000485091 NUDT16Q96DE0 195 aaKnown RBP23.96■■□□□ 1.43
CCDC78-214ENST00000485091 PER1O15534 1290 aaPredicted RBP23.95■■□□□ 1.42
CCDC78-214ENST00000485091 CABP1Q9NZU7 370 aa23.95■■□□□ 1.42
CCDC78-214ENST00000485091 STRCP1A6NGW2 1772 aa23.94■■□□□ 1.42
CCDC78-214ENST00000485091 CERKQ8TCT0 537 aa23.93■■□□□ 1.42
CCDC78-214ENST00000485091 ZNF335Q9H4Z2 1342 aaPredicted RBP23.93■■□□□ 1.42
CCDC78-214ENST00000485091 KNSTRNQ9Y448 316 aa23.93■■□□□ 1.42
CCDC78-214ENST00000485091 NKTRP30414 1462 aaKnown RBP23.92■■□□□ 1.42
CCDC78-214ENST00000485091 PRR36Q9H6K5 1346 aa23.92■■□□□ 1.42
CCDC78-214ENST00000485091 NALCNQ8IZF0 1738 aa23.91■■□□□ 1.42
CCDC78-214ENST00000485091 CARD14Q9BXL6 1004 aa23.91■■□□□ 1.42
CCDC78-214ENST00000485091 PPIP5K1Q6PFW1 1433 aa23.9■■□□□ 1.42
CCDC78-214ENST00000485091 NINLQ9Y2I6 1382 aa23.89■■□□□ 1.42
CCDC78-214ENST00000485091 CC2D1BQ5T0F9 858 aaKnown RBP23.89■■□□□ 1.41
CCDC78-214ENST00000485091 PRKRIP1Q9H875 184 aaPredicted RBP23.89■■□□□ 1.41
CCDC78-214ENST00000485091 CCDC61Q9Y6R9 512 aa23.89■■□□□ 1.41
CCDC78-214ENST00000485091 ADGRL3Q9HAR2 1447 aa23.89■■□□□ 1.41
CCDC78-214ENST00000485091 ANKRD36BQ8N2N9 1353 aa23.89■■□□□ 1.41
CCDC78-214ENST00000485091 ATP7BP35670 1465 aa23.88■■□□□ 1.41
CCDC78-214ENST00000485091 TMEM94Q12767 1356 aa23.88■■□□□ 1.41
CCDC78-214ENST00000485091 ILDR1Q86SU0 546 aaPredicted RBP23.87■■□□□ 1.41
CCDC78-214ENST00000485091 TERF2IPQ9NYB0 399 aa23.87■■□□□ 1.41
CCDC78-214ENST00000485091 NSD3Q9BZ95 1437 aa23.86■■□□□ 1.41
CCDC78-214ENST00000485091 HDGFL2Q7Z4V5 671 aaPredicted RBP23.86■■□□□ 1.41
CCDC78-214ENST00000485091 A0A1W2PP64 1363 aa23.86■■□□□ 1.41
CCDC78-214ENST00000485091 LTBP4Q8N2S1 1624 aa23.85■■□□□ 1.41
CCDC78-214ENST00000485091 CD163L1Q9NR16 1453 aa23.84■■□□□ 1.41
CCDC78-214ENST00000485091 KTN1Q86UP2 1357 aaKnown RBP23.84■■□□□ 1.41
CCDC78-214ENST00000485091 FBXO41Q8TF61 875 aa23.84■■□□□ 1.41
CCDC78-214ENST00000485091 USP32Q8NFA0 1604 aa23.84■■□□□ 1.41
CCDC78-214ENST00000485091 CDC42BPGQ6DT37 1551 aa23.83■■□□□ 1.41
CCDC78-214ENST00000485091 FMN2Q9NZ56 1722 aa23.83■■□□□ 1.41
CCDC78-214ENST00000485091 AMER1Q5JTC6 1135 aaPredicted RBP23.82■■□□□ 1.4
CCDC78-214ENST00000485091 PMFBP1Q8TBY8 1022 aa23.82■■□□□ 1.4
CCDC78-214ENST00000485091 C19orf44Q9H6X5 657 aa23.81■■□□□ 1.4
CCDC78-214ENST00000485091 RGPD8O14715 1765 aaPredicted RBP23.81■■□□□ 1.4
CCDC78-214ENST00000485091 TOPAZ1Q8N9V7 1692 aa23.79■■□□□ 1.4
CCDC78-214ENST00000485091 ANKARQ7Z5J8 1434 aa23.79■■□□□ 1.4
CCDC78-214ENST00000485091 LRRC7Q96NW7 1537 aa23.79■■□□□ 1.4
CCDC78-214ENST00000485091 ACEP12821 1306 aa23.78■■□□□ 1.4
CCDC78-214ENST00000485091 PLEKHG3A1L390 1219 aa23.77■■□□□ 1.4
CCDC78-214ENST00000485091 RALBP1Q15311 655 aa23.77■■□□□ 1.4
CCDC78-214ENST00000485091 ATF3P18847 181 aa23.76■■□□□ 1.39
CCDC78-214ENST00000485091 CGNL1Q0VF96 1302 aa23.76■■□□□ 1.39
CCDC78-214ENST00000485091 CPSF1Q10570 1443 aaKnown RBP23.76■■□□□ 1.39
CCDC78-214ENST00000485091 NCOA3Q9Y6Q9 1424 aa23.76■■□□□ 1.39
CCDC78-214ENST00000485091 ESCO1Q5FWF5 840 aa23.76■■□□□ 1.39
CCDC78-214ENST00000485091 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.76■■□□□ 1.39
CCDC78-214ENST00000485091 NGDNQ8NEJ9 315 aaKnown RBP23.76■■□□□ 1.39
CCDC78-214ENST00000485091 ITSN1Q15811 1721 aa23.75■■□□□ 1.39
CCDC78-214ENST00000485091 CCER2I3L3R5 266 aa23.75■■□□□ 1.39
CCDC78-214ENST00000485091 MSH6P52701 1360 aa23.74■■□□□ 1.39
CCDC78-214ENST00000485091 PARD3Q8TEW0 1356 aa23.74■■□□□ 1.39
CCDC78-214ENST00000485091 XIRP1Q702N8 1843 aaKnown RBP23.74■■□□□ 1.39
CCDC78-214ENST00000485091 ZNF692Q9BU19 519 aaPredicted RBP23.73■■□□□ 1.39
CCDC78-214ENST00000485091 NPC1L1Q9UHC9 1359 aa23.72■■□□□ 1.39
CCDC78-214ENST00000485091 CCDC184Q52MB2 194 aa23.72■■□□□ 1.39
CCDC78-214ENST00000485091 PHF8Q9UPP1 1060 aa23.72■■□□□ 1.39
CCDC78-214ENST00000485091 MYBBP1AQ9BQG0 1328 aaKnown RBP23.71■■□□□ 1.39
CCDC78-214ENST00000485091 ORAI2Q96SN7 254 aa23.71■■□□□ 1.39
CCDC78-214ENST00000485091 AKAP12Q02952 1782 aa23.71■■□□□ 1.39
CCDC78-214ENST00000485091 GGNBP2Q9H3C7 697 aa23.7■■□□□ 1.39
CCDC78-214ENST00000485091 IQSEC2Q5JU85 1478 aa23.7■■□□□ 1.38
CCDC78-214ENST00000485091 CADPS2Q86UW7 1296 aa23.7■■□□□ 1.38
CCDC78-214ENST00000485091 MORC1Q86VD1 984 aa23.7■■□□□ 1.38
CCDC78-214ENST00000485091 EDC4Q6P2E9 1401 aaKnown RBP23.69■■□□□ 1.38
CCDC78-214ENST00000485091 MON2Q7Z3U7 1717 aa23.68■■□□□ 1.38
CCDC78-214ENST00000485091 DCCP43146 1447 aa23.68■■□□□ 1.38
CCDC78-214ENST00000485091 FYB1O15117 783 aa23.68■■□□□ 1.38
CCDC78-214ENST00000485091 TNNT2P45379 298 aaPredicted RBP23.68■■□□□ 1.38
CCDC78-214ENST00000485091 C1orf167Q5SNV9 1468 aa23.68■■□□□ 1.38
CCDC78-214ENST00000485091 MRS2Q9HD23 443 aa23.67■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 94.4 ms