RNA–Protein interactions for RNA: ENST00000485055.5

CCDC39-205, Transcript of coiled-coil domain containing 39, humanhuman

TSL 1 (best)

Gene CCDC39, Length 2,874 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-205ENST00000485055 CFAP65Q6ZU64 1925 aaKnown RBP7.75□□□□□ -1.17
CCDC39-205ENST00000485055 DCCP43146 1447 aa7.75□□□□□ -1.17
CCDC39-205ENST00000485055 FAM135BQ49AJ0 1406 aa7.74□□□□□ -1.17
CCDC39-205ENST00000485055 AHDC1Q5TGY3 1603 aaPredicted RBP7.73□□□□□ -1.17
CCDC39-205ENST00000485055 POTEDQ86YR6 584 aa7.73□□□□□ -1.17
CCDC39-205ENST00000485055 ADAMTS13Q76LX8 1427 aa7.73□□□□□ -1.17
CCDC39-205ENST00000485055 AEBP1Q8IUX7 1158 aa7.73□□□□□ -1.17
CCDC39-205ENST00000485055 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.73□□□□□ -1.17
CCDC39-205ENST00000485055 TAF7LQ5H9L4 462 aa7.72□□□□□ -1.17
CCDC39-205ENST00000485055 RRP7BPQ9NSQ0 103 aa7.72□□□□□ -1.17
CCDC39-205ENST00000485055 SHPRHQ149N8 1683 aa7.72□□□□□ -1.17
CCDC39-205ENST00000485055 HDGFP51858 240 aaKnown RBP7.72□□□□□ -1.17
CCDC39-205ENST00000485055 TBX22Q9Y458 520 aa7.72□□□□□ -1.17
CCDC39-205ENST00000485055 NHSL1Q5SYE7 1610 aa7.71□□□□□ -1.17
CCDC39-205ENST00000485055 RIMS2Q9UQ26 1411 aa7.71□□□□□ -1.17
CCDC39-205ENST00000485055 KCNA6P17658 529 aa7.71□□□□□ -1.18
CCDC39-205ENST00000485055 ZNF335Q9H4Z2 1342 aaPredicted RBP7.71□□□□□ -1.18
CCDC39-205ENST00000485055 NRXN1Q9ULB1 1477 aa7.71□□□□□ -1.18
CCDC39-205ENST00000485055 IDI1Q13907 227 aa7.7□□□□□ -1.18
CCDC39-205ENST00000485055 RPGRIP1LQ68CZ1 1315 aa7.7□□□□□ -1.18
CCDC39-205ENST00000485055 USP35Q9P2H5 1018 aa7.7□□□□□ -1.18
CCDC39-205ENST00000485055 SIPA1L2Q9P2F8 1722 aaPredicted RBP7.7□□□□□ -1.18
CCDC39-205ENST00000485055 LTKP29376 864 aa7.69□□□□□ -1.18
CCDC39-205ENST00000485055 CCDC82Q8N4S0 544 aa7.69□□□□□ -1.18
CCDC39-205ENST00000485055 EID1Q9Y6B2 187 aa7.69□□□□□ -1.18
CCDC39-205ENST00000485055 MED1Q15648 1581 aaPredicted RBP7.69□□□□□ -1.18
CCDC39-205ENST00000485055 PTCH1Q13635 1447 aa7.69□□□□□ -1.18
CCDC39-205ENST00000485055 ZNF692Q9BU19 519 aaPredicted RBP7.69□□□□□ -1.18
CCDC39-205ENST00000485055 TECPR2O15040 1411 aa7.68□□□□□ -1.18
CCDC39-205ENST00000485055 SPDYE4A6NLX3 237 aa7.68□□□□□ -1.18
CCDC39-205ENST00000485055 ROBO1Q9Y6N7 1651 aa7.68□□□□□ -1.18
CCDC39-205ENST00000485055 COL16A1Q07092 1604 aaPredicted RBP7.68□□□□□ -1.18
CCDC39-205ENST00000485055 KIAA1210Q9ULL0 1709 aa7.67□□□□□ -1.18
CCDC39-205ENST00000485055 COL22A1Q8NFW1 1626 aaPredicted RBP7.67□□□□□ -1.18
CCDC39-205ENST00000485055 MYOM2P54296 1465 aa7.67□□□□□ -1.18
CCDC39-205ENST00000485055 SPATA31E1Q6ZUB1 1445 aa7.67□□□□□ -1.18
CCDC39-205ENST00000485055 TOM1O60784 492 aa7.66□□□□□ -1.18
CCDC39-205ENST00000485055 MKRN3Q13064 507 aaKnown RBP7.66□□□□□ -1.18
CCDC39-205ENST00000485055 TXNDC2Q86VQ3 553 aa7.66□□□□□ -1.18
CCDC39-205ENST00000485055 NALCNQ8IZF0 1738 aa7.66□□□□□ -1.18
CCDC39-205ENST00000485055 NUP155O75694 1391 aa7.66□□□□□ -1.18
CCDC39-205ENST00000485055 MFAP1P55081 439 aaKnown RBP7.65□□□□□ -1.18
CCDC39-205ENST00000485055 ZC3H15Q8WU90 426 aaKnown RBP7.65□□□□□ -1.18
CCDC39-205ENST00000485055 FAM177A1Q8N128 213 aaPredicted RBP7.65□□□□□ -1.18
CCDC39-205ENST00000485055 DLC1Q96QB1 1528 aa7.65□□□□□ -1.18
CCDC39-205ENST00000485055 CDC42BPGQ6DT37 1551 aa7.65□□□□□ -1.19
CCDC39-205ENST00000485055 IRX6P78412 446 aaPredicted RBP7.65□□□□□ -1.19
CCDC39-205ENST00000485055 SIRT1Q96EB6 747 aa7.65□□□□□ -1.19
CCDC39-205ENST00000485055 GPBP1L1Q9HC44 474 aaPredicted RBP7.65□□□□□ -1.19
CCDC39-205ENST00000485055 PHLPP1O60346 1717 aa7.64□□□□□ -1.19
CCDC39-205ENST00000485055 ADGRB2O60241 1585 aa7.64□□□□□ -1.19
CCDC39-205ENST00000485055 IL27Q8NEV9 243 aa7.64□□□□□ -1.19
CCDC39-205ENST00000485055 STAC3Q96MF2 364 aa7.64□□□□□ -1.19
CCDC39-205ENST00000485055 TMCO4Q5TGY1 634 aa7.64□□□□□ -1.19
CCDC39-205ENST00000485055 BCL11BQ9C0K0 894 aaPredicted RBP7.64□□□□□ -1.19
CCDC39-205ENST00000485055 PTPRUQ92729 1446 aa7.63□□□□□ -1.19
CCDC39-205ENST00000485055 FAM50AQ14320 339 aaKnown RBP7.63□□□□□ -1.19
CCDC39-205ENST00000485055 NKX1-1Q15270 411 aaPredicted RBP7.63□□□□□ -1.19
CCDC39-205ENST00000485055 PROM2Q8N271 834 aa7.63□□□□□ -1.19
CCDC39-205ENST00000485055 KIF1AQ12756 1690 aa7.62□□□□□ -1.19
CCDC39-205ENST00000485055 FMN2Q9NZ56 1722 aa7.62□□□□□ -1.19
CCDC39-205ENST00000485055 CWC22Q9HCG8 908 aaKnown RBP7.61□□□□□ -1.19
CCDC39-205ENST00000485055 CHIC2Q9UKJ5 165 aa7.61□□□□□ -1.19
CCDC39-205ENST00000485055 MARF1Q9Y4F3 1742 aaKnown RBP7.61□□□□□ -1.19
CCDC39-205ENST00000485055 ANKRD30BQ9BXX2 1392 aa7.61□□□□□ -1.19
CCDC39-205ENST00000485055 ADGRL3Q9HAR2 1447 aa7.61□□□□□ -1.19
CCDC39-205ENST00000485055 GZF1Q9H116 711 aaPredicted RBP7.61□□□□□ -1.19
CCDC39-205ENST00000485055 BRPF3Q9ULD4 1205 aa7.61□□□□□ -1.19
CCDC39-205ENST00000485055 SETD5Q9C0A6 1442 aa7.61□□□□□ -1.19
CCDC39-205ENST00000485055 TMEM94Q12767 1356 aa7.6□□□□□ -1.19
CCDC39-205ENST00000485055 PIK3C2GO75747 1445 aa7.6□□□□□ -1.19
CCDC39-205ENST00000485055 TNKS1BP1Q9C0C2 1729 aaKnown RBP7.6□□□□□ -1.19
CCDC39-205ENST00000485055 SPOCK2Q92563 424 aa7.6□□□□□ -1.19
CCDC39-205ENST00000485055 ASXL1Q8IXJ9 1541 aa7.59□□□□□ -1.19
CCDC39-205ENST00000485055 CDK12Q9NYV4 1490 aaPredicted RBP7.59□□□□□ -1.19
CCDC39-205ENST00000485055 UBAP1LF5GYI3 381 aa7.59□□□□□ -1.19
CCDC39-205ENST00000485055 MST1RQ04912 1400 aa7.59□□□□□ -1.19
CCDC39-205ENST00000485055 MSH6P52701 1360 aa7.58□□□□□ -1.2
CCDC39-205ENST00000485055 KCNV2Q8TDN2 545 aa7.58□□□□□ -1.2
CCDC39-205ENST00000485055 ZFP91Q96JP5 570 aaPredicted RBP7.58□□□□□ -1.2
CCDC39-205ENST00000485055 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.58□□□□□ -1.2
CCDC39-205ENST00000485055 ABCC11Q96J66 1382 aa7.57□□□□□ -1.2
CCDC39-205ENST00000485055 NEFLP07196 543 aa7.57□□□□□ -1.2
CCDC39-205ENST00000485055 ADGRB1O14514 1584 aa7.57□□□□□ -1.2
CCDC39-205ENST00000485055 E9PSI1 815 aa7.57□□□□□ -1.2
CCDC39-205ENST00000485055 VGFO15240 615 aaPredicted RBP7.57□□□□□ -1.2
CCDC39-205ENST00000485055 PPM1GO15355 546 aaPredicted RBP7.56□□□□□ -1.2
CCDC39-205ENST00000485055 C19orf44Q9H6X5 657 aa7.56□□□□□ -1.2
CCDC39-205ENST00000485055 LRPPRCP42704 1394 aaKnown RBP7.56□□□□□ -1.2
CCDC39-205ENST00000485055 GTPBP6O43824 516 aaPredicted RBP7.56□□□□□ -1.2
CCDC39-205ENST00000485055 SPATA31A6Q5VVP1 1343 aa7.55□□□□□ -1.2
CCDC39-205ENST00000485055 ZNF592Q92610 1267 aa7.55□□□□□ -1.2
CCDC39-205ENST00000485055 CRYBG1Q9Y4K1 1723 aa7.55□□□□□ -1.2
CCDC39-205ENST00000485055 HSPA1LP34931 641 aa7.55□□□□□ -1.2
CCDC39-205ENST00000485055 TRAIPQ9BWF2 469 aa7.55□□□□□ -1.2
CCDC39-205ENST00000485055 METP08581 1390 aa7.55□□□□□ -1.2
CCDC39-205ENST00000485055 JCADQ9P266 1359 aa7.55□□□□□ -1.2
CCDC39-205ENST00000485055 CADPS2Q86UW7 1296 aa7.54□□□□□ -1.2
CCDC39-205ENST00000485055 CCDC144AA2RUR9 1427 aa7.54□□□□□ -1.2
CCDC39-205ENST00000485055 TOPAZ1Q8N9V7 1692 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms