RNA–Protein interactions for RNA: ENST00000484990.1

COL13A1-209, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 2

Gene COL13A1, Length 360 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-209ENST00000484990 LAMC1P11047 1609 aa17.34■□□□□ 0.37
COL13A1-209ENST00000484990 PRAG1Q86YV5 1406 aa17.31■□□□□ 0.36
COL13A1-209ENST00000484990 RRBP1Q9P2E9 1410 aaKnown RBP17.31■□□□□ 0.36
COL13A1-209ENST00000484990 LRPPRCP42704 1394 aaKnown RBP17.31■□□□□ 0.36
COL13A1-209ENST00000484990 CCDC125Q86Z20 511 aa17.31■□□□□ 0.36
COL13A1-209ENST00000484990 FOXO3O43524 673 aa17.3■□□□□ 0.36
COL13A1-209ENST00000484990 ZRANB1Q9UGI0 708 aa17.29■□□□□ 0.36
COL13A1-209ENST00000484990 ATRNO75882 1429 aa17.28■□□□□ 0.36
COL13A1-209ENST00000484990 STK26Q9P289 416 aa17.27■□□□□ 0.36
COL13A1-209ENST00000484990 PPLO60437 1756 aa17.27■□□□□ 0.35
COL13A1-209ENST00000484990 COL22A1Q8NFW1 1626 aaPredicted RBP17.26■□□□□ 0.35
COL13A1-209ENST00000484990 RGL3Q3MIN7 710 aa17.26■□□□□ 0.35
COL13A1-209ENST00000484990 GJD4Q96KN9 370 aaPredicted RBP17.26■□□□□ 0.35
COL13A1-209ENST00000484990 NUTM2FA1L443 756 aa17.25■□□□□ 0.35
COL13A1-209ENST00000484990 XPCQ01831 940 aaPredicted RBP17.25■□□□□ 0.35
COL13A1-209ENST00000484990 WAPLQ7Z5K2 1190 aa17.25■□□□□ 0.35
COL13A1-209ENST00000484990 ADGRF5Q8IZF2 1346 aa17.24■□□□□ 0.35
COL13A1-209ENST00000484990 MYOM2P54296 1465 aa17.24■□□□□ 0.35
COL13A1-209ENST00000484990 ANKRD30BQ9BXX2 1392 aa17.23■□□□□ 0.35
COL13A1-209ENST00000484990 BCL9LQ86UU0 1499 aa17.23■□□□□ 0.35
COL13A1-209ENST00000484990 CDC42BPGQ6DT37 1551 aa17.23■□□□□ 0.35
COL13A1-209ENST00000484990 CCDC144AA2RUR9 1427 aa17.22■□□□□ 0.35
COL13A1-209ENST00000484990 UNC5CLQ8IV45 518 aa17.22■□□□□ 0.35
COL13A1-209ENST00000484990 ABCC11Q96J66 1382 aa17.22■□□□□ 0.35
COL13A1-209ENST00000484990 PXDNQ92626 1479 aa17.22■□□□□ 0.35
COL13A1-209ENST00000484990 TMEM132EQ6IEE7 984 aa17.21■□□□□ 0.35
COL13A1-209ENST00000484990 PSME1Q06323 249 aa17.2■□□□□ 0.34
COL13A1-209ENST00000484990 KRT28Q7Z3Y7 464 aa17.2■□□□□ 0.34
COL13A1-209ENST00000484990 SIRT1Q96EB6 747 aa17.2■□□□□ 0.34
COL13A1-209ENST00000484990 MARF1Q9Y4F3 1742 aaKnown RBP17.2■□□□□ 0.34
COL13A1-209ENST00000484990 SPATA31A3Q5VYP0 1347 aa17.2■□□□□ 0.34
COL13A1-209ENST00000484990 HAP1P54257 671 aaPredicted RBP17.19■□□□□ 0.34
COL13A1-209ENST00000484990 TECPR2O15040 1411 aa17.19■□□□□ 0.34
COL13A1-209ENST00000484990 MPHOSPH9Q99550 1183 aa17.18■□□□□ 0.34
COL13A1-209ENST00000484990 SF3B2Q13435 895 aaKnown RBP17.16■□□□□ 0.34
COL13A1-209ENST00000484990 ACIN1Q9UKV3 1341 aaKnown RBP17.16■□□□□ 0.34
COL13A1-209ENST00000484990 SPATA31E1Q6ZUB1 1445 aa17.15■□□□□ 0.34
COL13A1-209ENST00000484990 PHF8Q9UPP1 1060 aa17.15■□□□□ 0.34
COL13A1-209ENST00000484990 SRCAPQ6ZRS2 3230 aa17.15■□□□□ 0.34
COL13A1-209ENST00000484990 PLEKHH1Q9ULM0 1364 aa17.15■□□□□ 0.34
COL13A1-209ENST00000484990 YTHDC2Q9H6S0 1430 aaKnown RBP17.14■□□□□ 0.33
COL13A1-209ENST00000484990 C14orf93Q9H972 538 aaKnown RBP17.14■□□□□ 0.33
COL13A1-209ENST00000484990 SLIT2O94813 1529 aa17.14■□□□□ 0.33
COL13A1-209ENST00000484990 DHX57Q6P158 1386 aaKnown RBP17.14■□□□□ 0.33
COL13A1-209ENST00000484990 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.13■□□□□ 0.33
COL13A1-209ENST00000484990 BLMP54132 1417 aaPredicted RBP17.13■□□□□ 0.33
COL13A1-209ENST00000484990 RALGAPBQ86X10 1494 aa17.12■□□□□ 0.33
COL13A1-209ENST00000484990 VPS72Q15906 364 aa17.12■□□□□ 0.33
COL13A1-209ENST00000484990 LMOD2Q6P5Q4 547 aa17.12■□□□□ 0.33
COL13A1-209ENST00000484990 SEPT12Q8IYM1 358 aa17.12■□□□□ 0.33
COL13A1-209ENST00000484990 CCDC9Q9Y3X0 531 aaKnown RBP17.12■□□□□ 0.33
COL13A1-209ENST00000484990 KIF1AQ12756 1690 aa17.12■□□□□ 0.33
COL13A1-209ENST00000484990 PIK3C2GO75747 1445 aa17.12■□□□□ 0.33
COL13A1-209ENST00000484990 EP400Q96L91 3159 aa17.12■□□□□ 0.33
COL13A1-209ENST00000484990 KNDC1Q76NI1 1749 aa17.11■□□□□ 0.33
COL13A1-209ENST00000484990 FMN2Q9NZ56 1722 aa17.1■□□□□ 0.33
COL13A1-209ENST00000484990 ONECUT3O60422 494 aaPredicted RBP17.1■□□□□ 0.33
COL13A1-209ENST00000484990 CABLES1Q8TDN4 633 aa17.1■□□□□ 0.33
COL13A1-209ENST00000484990 CFAP70Q5T0N1 1121 aa17.09■□□□□ 0.33
COL13A1-209ENST00000484990 POGKQ9P215 609 aa17.09■□□□□ 0.33
COL13A1-209ENST00000484990 IFT172Q9UG01 1749 aa17.09■□□□□ 0.33
COL13A1-209ENST00000484990 GLI3P10071 1580 aa17.08■□□□□ 0.32
COL13A1-209ENST00000484990 TNS3Q68CZ2 1445 aa17.08■□□□□ 0.32
COL13A1-209ENST00000484990 SBNO1A3KN83 1393 aa17.08■□□□□ 0.32
COL13A1-209ENST00000484990 ARHGEF10O15013 1369 aa17.08■□□□□ 0.32
COL13A1-209ENST00000484990 PLEKHG5O94827 1062 aa17.08■□□□□ 0.32
COL13A1-209ENST00000484990 KRT27Q7Z3Y8 459 aa17.08■□□□□ 0.32
COL13A1-209ENST00000484990 SAFB2Q14151 953 aaKnown RBP eCLIP17.07■□□□□ 0.32
COL13A1-209ENST00000484990 DEFB132Q7Z7B7 95 aa17.07■□□□□ 0.32
COL13A1-209ENST00000484990 PRAM1Q96QH2 718 aa17.07■□□□□ 0.32
COL13A1-209ENST00000484990 USP32Q8NFA0 1604 aa17.07■□□□□ 0.32
COL13A1-209ENST00000484990 RGPD8O14715 1765 aaPredicted RBP17.06■□□□□ 0.32
COL13A1-209ENST00000484990 FAM83GA6ND36 823 aa17.05■□□□□ 0.32
COL13A1-209ENST00000484990 PMFBP1Q8TBY8 1022 aa17.05■□□□□ 0.32
COL13A1-209ENST00000484990 BRWD3Q6RI45 1802 aa17.05■□□□□ 0.32
COL13A1-209ENST00000484990 A0A0G2JS52 829 aa17.04■□□□□ 0.32
COL13A1-209ENST00000484990 MYT1Q01538 1121 aa17.04■□□□□ 0.32
COL13A1-209ENST00000484990 BAG6P46379 1132 aa17.03■□□□□ 0.32
COL13A1-209ENST00000484990 NRXN1Q9ULB1 1477 aa17.03■□□□□ 0.32
COL13A1-209ENST00000484990 NWD2Q9ULI1 1742 aa17.02■□□□□ 0.32
COL13A1-209ENST00000484990 BTG4Q9NY30 223 aa17.01■□□□□ 0.31
COL13A1-209ENST00000484990 GPRASP1Q5JY77 1395 aa17.01■□□□□ 0.31
COL13A1-209ENST00000484990 ANKARQ7Z5J8 1434 aa17■□□□□ 0.31
COL13A1-209ENST00000484990 FAM98CQ17RN3 349 aaKnown RBP16.99■□□□□ 0.31
COL13A1-209ENST00000484990 PLCH1Q4KWH8 1693 aa16.98■□□□□ 0.31
COL13A1-209ENST00000484990 TRAK1Q9UPV9 953 aa16.98■□□□□ 0.31
COL13A1-209ENST00000484990 EIF3AQ14152 1382 aaKnown RBP16.98■□□□□ 0.31
COL13A1-209ENST00000484990 DLC1Q96QB1 1528 aa16.97■□□□□ 0.31
COL13A1-209ENST00000484990 NGDNQ8NEJ9 315 aaKnown RBP16.97■□□□□ 0.31
COL13A1-209ENST00000484990 STAC3Q96MF2 364 aa16.97■□□□□ 0.31
COL13A1-209ENST00000484990 HIRIP3Q9BW71 556 aaPredicted RBP16.97■□□□□ 0.31
COL13A1-209ENST00000484990 MINK1Q8N4C8 1332 aaPredicted RBP16.96■□□□□ 0.3
COL13A1-209ENST00000484990 WASLO00401 505 aaPredicted RBP16.95■□□□□ 0.3
COL13A1-209ENST00000484990 PAK3O75914 559 aaPredicted RBP16.95■□□□□ 0.3
COL13A1-209ENST00000484990 KDM2AQ9Y2K7 1162 aa16.95■□□□□ 0.3
COL13A1-209ENST00000484990 PSDA5PKW4 1024 aaPredicted RBP16.93■□□□□ 0.3
COL13A1-209ENST00000484990 DCAF11Q8TEB1 546 aa16.93■□□□□ 0.3
COL13A1-209ENST00000484990 SPATA31A5Q5VU36 1347 aa16.93■□□□□ 0.3
COL13A1-209ENST00000484990 SPATA31A7Q8IWB4 1347 aa16.93■□□□□ 0.3
COL13A1-209ENST00000484990 ABCA3Q99758 1704 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms