RNA–Protein interactions for RNA: ENST00000484933.6

LINC01140-206, Transcript of long intergenic non-protein coding RNA 1140, humanhuman

TSL 1 (best) BASIC

Gene LINC01140, Length 3,368 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01140-206ENST00000484933 IGSF3O75054 1194 aa12.74□□□□□ -0.37
LINC01140-206ENST00000484933 FANCAO15360 1455 aa12.74□□□□□ -0.37
LINC01140-206ENST00000484933 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.74□□□□□ -0.37
LINC01140-206ENST00000484933 TRAPPC8Q9Y2L5 1435 aa12.74□□□□□ -0.37
LINC01140-206ENST00000484933 NAP1L2Q9ULW6 460 aaPredicted RBP12.74□□□□□ -0.37
LINC01140-206ENST00000484933 CBX1P83916 185 aa12.73□□□□□ -0.37
LINC01140-206ENST00000484933 TBC1D32Q96NH3 1257 aa12.73□□□□□ -0.37
LINC01140-206ENST00000484933 HSCBQ8IWL3 235 aa12.73□□□□□ -0.37
LINC01140-206ENST00000484933 JARID2Q92833 1246 aaPredicted RBP12.73□□□□□ -0.37
LINC01140-206ENST00000484933 ARHGEF12Q9NZN5 1544 aa12.73□□□□□ -0.37
LINC01140-206ENST00000484933 DNTTIP2Q5QJE6 756 aaKnown RBP12.73□□□□□ -0.37
LINC01140-206ENST00000484933 TSC1Q92574 1164 aa12.73□□□□□ -0.37
LINC01140-206ENST00000484933 E9PSI1 815 aa12.72□□□□□ -0.37
LINC01140-206ENST00000484933 MPNDQ8N594 471 aa12.72□□□□□ -0.37
LINC01140-206ENST00000484933 MAP7D2Q96T17 732 aa12.72□□□□□ -0.37
LINC01140-206ENST00000484933 COL17A1Q9UMD9 1497 aaPredicted RBP12.72□□□□□ -0.37
LINC01140-206ENST00000484933 ADGRL2O95490 1459 aa12.72□□□□□ -0.37
LINC01140-206ENST00000484933 SMAP1Q8IYB5 467 aaPredicted RBP12.72□□□□□ -0.37
LINC01140-206ENST00000484933 GTF2E1P29083 439 aaPredicted RBP12.71□□□□□ -0.38
LINC01140-206ENST00000484933 NUTM2DQ5VT03 806 aaPredicted RBP12.71□□□□□ -0.38
LINC01140-206ENST00000484933 C22orf23Q9BZE7 217 aa12.71□□□□□ -0.38
LINC01140-206ENST00000484933 PDZRN3Q9UPQ7 1066 aa12.71□□□□□ -0.38
LINC01140-206ENST00000484933 MAPK8IP3Q9UPT6 1336 aa12.71□□□□□ -0.38
LINC01140-206ENST00000484933 CGNL1Q0VF96 1302 aa12.7□□□□□ -0.38
LINC01140-206ENST00000484933 FAM177BA6PVY3 158 aa12.7□□□□□ -0.38
LINC01140-206ENST00000484933 TNPO1Q92973 898 aaKnown RBP12.7□□□□□ -0.38
LINC01140-206ENST00000484933 PCDHB15Q9Y5E8 787 aa12.7□□□□□ -0.38
LINC01140-206ENST00000484933 ZNF521Q96K83 1311 aa12.7□□□□□ -0.38
LINC01140-206ENST00000484933 HSP90AB1P08238 724 aaKnown RBP12.7□□□□□ -0.38
LINC01140-206ENST00000484933 CCDC173Q0VFZ6 552 aa12.7□□□□□ -0.38
LINC01140-206ENST00000484933 ADGRL1O94910 1474 aa12.7□□□□□ -0.38
LINC01140-206ENST00000484933 A2MP01023 1474 aa12.7□□□□□ -0.38
LINC01140-206ENST00000484933 DDX49Q9Y6V7 483 aaKnown RBP12.69□□□□□ -0.38
LINC01140-206ENST00000484933 MAGI2Q86UL8 1455 aa12.69□□□□□ -0.38
LINC01140-206ENST00000484933 RLBP1P12271 317 aa12.69□□□□□ -0.38
LINC01140-206ENST00000484933 SYCP2Q9BX26 1530 aa12.69□□□□□ -0.38
LINC01140-206ENST00000484933 CEBPAP49715 358 aaPredicted RBP12.69□□□□□ -0.38
LINC01140-206ENST00000484933 PLEKHH2Q8IVE3 1493 aa12.68□□□□□ -0.38
LINC01140-206ENST00000484933 UHRF1BP1LA0JNW5 1464 aa12.68□□□□□ -0.38
LINC01140-206ENST00000484933 PLCH2O75038 1416 aa12.68□□□□□ -0.38
LINC01140-206ENST00000484933 GBP4Q96PP9 640 aa12.68□□□□□ -0.38
LINC01140-206ENST00000484933 ADGBQ8N7X0 1667 aa12.68□□□□□ -0.38
LINC01140-206ENST00000484933 FAM135AQ9P2D6 1515 aa12.67□□□□□ -0.38
LINC01140-206ENST00000484933 STAC3Q96MF2 364 aa12.67□□□□□ -0.38
LINC01140-206ENST00000484933 NKTRP30414 1462 aaKnown RBP12.67□□□□□ -0.38
LINC01140-206ENST00000484933 CDCA8Q53HL2 280 aa12.67□□□□□ -0.38
LINC01140-206ENST00000484933 PPP4R3BQ5MIZ7 849 aa12.67□□□□□ -0.38
LINC01140-206ENST00000484933 ESF1Q9H501 851 aaKnown RBP12.67□□□□□ -0.38
LINC01140-206ENST00000484933 KDM5DQ9BY66 1539 aa12.67□□□□□ -0.38
LINC01140-206ENST00000484933 EIF3AQ14152 1382 aaKnown RBP12.66□□□□□ -0.38
LINC01140-206ENST00000484933 WWC1Q8IX03 1113 aa12.66□□□□□ -0.38
LINC01140-206ENST00000484933 ABCC10Q5T3U5 1492 aa12.66□□□□□ -0.38
LINC01140-206ENST00000484933 ZBTB22O15209 634 aa12.66□□□□□ -0.38
LINC01140-206ENST00000484933 FTSJ3Q8IY81 847 aaKnown RBP12.66□□□□□ -0.38
LINC01140-206ENST00000484933 E9PCH4 1651 aa12.66□□□□□ -0.38
LINC01140-206ENST00000484933 SPDYE4A6NLX3 237 aa12.65□□□□□ -0.38
LINC01140-206ENST00000484933 PDE3AQ14432 1141 aa12.65□□□□□ -0.38
LINC01140-206ENST00000484933 ITSN2Q9NZM3 1697 aa12.65□□□□□ -0.38
LINC01140-206ENST00000484933 PMFBP1Q8TBY8 1022 aa12.64□□□□□ -0.39
LINC01140-206ENST00000484933 PLA2R1Q13018 1463 aa12.64□□□□□ -0.39
LINC01140-206ENST00000484933 PTMAP06454 111 aaKnown RBP12.64□□□□□ -0.39
LINC01140-206ENST00000484933 DMTNQ08495 405 aa12.64□□□□□ -0.39
LINC01140-206ENST00000484933 PAXIP1Q6ZW49 1069 aaPredicted RBP12.64□□□□□ -0.39
LINC01140-206ENST00000484933 CDK11BP21127 795 aaKnown RBP12.64□□□□□ -0.39
LINC01140-206ENST00000484933 CAVIN1Q6NZI2 390 aaKnown RBP12.64□□□□□ -0.39
LINC01140-206ENST00000484933 MORC1Q86VD1 984 aa12.64□□□□□ -0.39
LINC01140-206ENST00000484933 ZSCAN20P17040 1043 aaPredicted RBP12.63□□□□□ -0.39
LINC01140-206ENST00000484933 CFAP70Q5T0N1 1121 aa12.63□□□□□ -0.39
LINC01140-206ENST00000484933 TCP11L2Q8N4U5 519 aa12.63□□□□□ -0.39
LINC01140-206ENST00000484933 ISY1Q9ULR0 285 aaKnown RBP12.63□□□□□ -0.39
LINC01140-206ENST00000484933 RWDD1Q9H446 243 aaPredicted RBP12.63□□□□□ -0.39
LINC01140-206ENST00000484933 GPRASP1Q5JY77 1395 aa12.63□□□□□ -0.39
LINC01140-206ENST00000484933 YEATS2Q9ULM3 1422 aa12.63□□□□□ -0.39
LINC01140-206ENST00000484933 GOLGA6L22H0YM25 854 aa12.63□□□□□ -0.39
LINC01140-206ENST00000484933 RARSP54136 660 aaKnown RBP12.63□□□□□ -0.39
LINC01140-206ENST00000484933 TRMT2AQ8IZ69 625 aaKnown RBP12.63□□□□□ -0.39
LINC01140-206ENST00000484933 RNF214Q8ND24 703 aa12.63□□□□□ -0.39
LINC01140-206ENST00000484933 CGNQ9P2M7 1197 aaKnown RBP12.63□□□□□ -0.39
LINC01140-206ENST00000484933 TPRNQ4KMQ1 711 aa12.62□□□□□ -0.39
LINC01140-206ENST00000484933 TRPM1Q7Z4N2 1603 aa12.62□□□□□ -0.39
LINC01140-206ENST00000484933 CCDC94Q9BW85 323 aaPredicted RBP12.61□□□□□ -0.39
LINC01140-206ENST00000484933 TSR2Q969E8 191 aaKnown RBP12.61□□□□□ -0.39
LINC01140-206ENST00000484933 CARD14Q9BXL6 1004 aa12.61□□□□□ -0.39
LINC01140-206ENST00000484933 DYNC1I1O14576 645 aa12.61□□□□□ -0.39
LINC01140-206ENST00000484933 SSFA2P28290 1259 aa12.61□□□□□ -0.39
LINC01140-206ENST00000484933 ITPRIPQ8IWB1 547 aa12.61□□□□□ -0.39
LINC01140-206ENST00000484933 SKOR2Q2VWA4 1001 aaPredicted RBP12.6□□□□□ -0.39
LINC01140-206ENST00000484933 FBXO31Q5XUX0 539 aaPredicted RBP12.6□□□□□ -0.39
LINC01140-206ENST00000484933 MTERF4Q7Z6M4 381 aaKnown RBP12.6□□□□□ -0.39
LINC01140-206ENST00000484933 U2AF1L5P0DN76 240 aaPredicted RBP12.59□□□□□ -0.39
LINC01140-206ENST00000484933 U2AF1Q01081 240 aaKnown RBP eCLIP12.59□□□□□ -0.39
LINC01140-206ENST00000484933 MCTP1Q6DN14 999 aa12.59□□□□□ -0.39
LINC01140-206ENST00000484933 PPP1R9BQ96SB3 815 aa12.59□□□□□ -0.39
LINC01140-206ENST00000484933 CCDC141Q6ZP82 1450 aa12.59□□□□□ -0.39
LINC01140-206ENST00000484933 CDC42BPAQ5VT25 1732 aa12.59□□□□□ -0.39
LINC01140-206ENST00000484933 SMC4Q9NTJ3 1288 aa12.58□□□□□ -0.39
LINC01140-206ENST00000484933 SAMD9LQ8IVG5 1584 aa12.58□□□□□ -0.4
LINC01140-206ENST00000484933 CHMP4AQ9BY43 222 aa12.58□□□□□ -0.4
LINC01140-206ENST00000484933 TRAK1Q9UPV9 953 aa12.58□□□□□ -0.4
LINC01140-206ENST00000484933 CROCC2H7BZ55 1655 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms