RNA–Protein interactions for RNA: ENST00000484700.1

GYPC-206, Transcript of glycophorin C (Gerbich blood group), humanhuman

TSL 5

Gene GYPC, Length 766 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPC-206ENST00000484700 WAPLQ7Z5K2 1190 aa26.58■■□□□ 1.85
GYPC-206ENST00000484700 PNPLA6Q8IY17 1366 aa26.58■■□□□ 1.84
GYPC-206ENST00000484700 ESCO1Q5FWF5 840 aa26.57■■□□□ 1.84
GYPC-206ENST00000484700 C14orf93Q9H972 538 aaKnown RBP26.57■■□□□ 1.84
GYPC-206ENST00000484700 CDC42BPGQ6DT37 1551 aa26.56■■□□□ 1.84
GYPC-206ENST00000484700 SOS2Q07890 1332 aaPredicted RBP26.55■■□□□ 1.84
GYPC-206ENST00000484700 YTHDC2Q9H6S0 1430 aaKnown RBP26.55■■□□□ 1.84
GYPC-206ENST00000484700 HRCP23327 699 aa26.54■■□□□ 1.84
GYPC-206ENST00000484700 SIRT1Q96EB6 747 aa26.53■■□□□ 1.84
GYPC-206ENST00000484700 DHX57Q6P158 1386 aaKnown RBP26.53■■□□□ 1.84
GYPC-206ENST00000484700 MYOM2P54296 1465 aa26.53■■□□□ 1.84
GYPC-206ENST00000484700 LAMC1P11047 1609 aa26.53■■□□□ 1.84
GYPC-206ENST00000484700 AFF2P51816 1311 aa26.52■■□□□ 1.84
GYPC-206ENST00000484700 NPHP3Q7Z494 1330 aa26.52■■□□□ 1.84
GYPC-206ENST00000484700 RXRBP28702 533 aa26.51■■□□□ 1.83
GYPC-206ENST00000484700 CFAP70Q5T0N1 1121 aa26.51■■□□□ 1.83
GYPC-206ENST00000484700 C8orf37Q96NL8 207 aa26.51■■□□□ 1.83
GYPC-206ENST00000484700 KNDC1Q76NI1 1749 aa26.51■■□□□ 1.83
GYPC-206ENST00000484700 NRXN1Q9ULB1 1477 aa26.5■■□□□ 1.83
GYPC-206ENST00000484700 PLEKHH1Q9ULM0 1364 aa26.48■■□□□ 1.83
GYPC-206ENST00000484700 NUTM2FA1L443 756 aa26.48■■□□□ 1.83
GYPC-206ENST00000484700 ADAMTS2O95450 1211 aa26.47■■□□□ 1.83
GYPC-206ENST00000484700 NGLY1Q96IV0 654 aa26.47■■□□□ 1.83
GYPC-206ENST00000484700 FOXO3O43524 673 aa26.46■■□□□ 1.83
GYPC-206ENST00000484700 STAC3Q96MF2 364 aa26.44■■□□□ 1.82
GYPC-206ENST00000484700 PRAM1Q96QH2 718 aa26.42■■□□□ 1.82
GYPC-206ENST00000484700 POGKQ9P215 609 aa26.42■■□□□ 1.82
GYPC-206ENST00000484700 KDM2AQ9Y2K7 1162 aa26.42■■□□□ 1.82
GYPC-206ENST00000484700 DCAF11Q8TEB1 546 aa26.41■■□□□ 1.82
GYPC-206ENST00000484700 QTRT2Q9H974 415 aaKnown RBP26.41■■□□□ 1.82
GYPC-206ENST00000484700 XPCQ01831 940 aaPredicted RBP26.4■■□□□ 1.82
GYPC-206ENST00000484700 PXDNQ92626 1479 aa26.39■■□□□ 1.82
GYPC-206ENST00000484700 SAFB2Q14151 953 aaKnown RBP eCLIP26.39■■□□□ 1.82
GYPC-206ENST00000484700 CDK12Q9NYV4 1490 aaPredicted RBP26.38■■□□□ 1.81
GYPC-206ENST00000484700 RBM6P78332 1123 aaKnown RBP26.38■■□□□ 1.81
GYPC-206ENST00000484700 FMN2Q9NZ56 1722 aa26.38■■□□□ 1.81
GYPC-206ENST00000484700 COL22A1Q8NFW1 1626 aaPredicted RBP26.36■■□□□ 1.81
GYPC-206ENST00000484700 USP21Q9UK80 565 aa26.35■■□□□ 1.81
GYPC-206ENST00000484700 DLC1Q96QB1 1528 aa26.34■■□□□ 1.81
GYPC-206ENST00000484700 PHF8Q9UPP1 1060 aa26.34■■□□□ 1.81
GYPC-206ENST00000484700 TRAK1Q9UPV9 953 aa26.34■■□□□ 1.81
GYPC-206ENST00000484700 KIF1AQ12756 1690 aa26.34■■□□□ 1.81
GYPC-206ENST00000484700 KRT28Q7Z3Y7 464 aa26.33■■□□□ 1.81
GYPC-206ENST00000484700 PSME1Q06323 249 aa26.32■■□□□ 1.8
GYPC-206ENST00000484700 FNBP4Q8N3X1 1017 aaPredicted RBP26.32■■□□□ 1.8
GYPC-206ENST00000484700 TRPC5Q9UL62 973 aaPredicted RBP26.31■■□□□ 1.8
GYPC-206ENST00000484700 ADGRB1O14514 1584 aa26.3■■□□□ 1.8
GYPC-206ENST00000484700 SPATA31A3Q5VYP0 1347 aa26.3■■□□□ 1.8
GYPC-206ENST00000484700 UPF1Q92900 1129 aaKnown RBP eCLIP26.29■■□□□ 1.8
GYPC-206ENST00000484700 EIF3AQ14152 1382 aaKnown RBP26.27■■□□□ 1.8
GYPC-206ENST00000484700 ANKARQ7Z5J8 1434 aa26.27■■□□□ 1.8
GYPC-206ENST00000484700 RGS12O14924 1447 aa26.25■■□□□ 1.79
GYPC-206ENST00000484700 MINK1Q8N4C8 1332 aaPredicted RBP26.25■■□□□ 1.79
GYPC-206ENST00000484700 HAP1P54257 671 aaPredicted RBP26.25■■□□□ 1.79
GYPC-206ENST00000484700 HIRIP3Q9BW71 556 aaPredicted RBP26.24■■□□□ 1.79
GYPC-206ENST00000484700 ADGRB2O60241 1585 aa26.22■■□□□ 1.79
GYPC-206ENST00000484700 LMOD2Q6P5Q4 547 aa26.22■■□□□ 1.79
GYPC-206ENST00000484700 RGPD8O14715 1765 aaPredicted RBP26.22■■□□□ 1.79
GYPC-206ENST00000484700 TNS3Q68CZ2 1445 aa26.22■■□□□ 1.79
GYPC-206ENST00000484700 SBNO1A3KN83 1393 aa26.21■■□□□ 1.79
GYPC-206ENST00000484700 PMFBP1Q8TBY8 1022 aa26.21■■□□□ 1.79
GYPC-206ENST00000484700 ATRNO75882 1429 aa26.21■■□□□ 1.79
GYPC-206ENST00000484700 WASLO00401 505 aaPredicted RBP26.19■■□□□ 1.78
GYPC-206ENST00000484700 ARHGEF10O15013 1369 aa26.19■■□□□ 1.78
GYPC-206ENST00000484700 MARF1Q9Y4F3 1742 aaKnown RBP26.17■■□□□ 1.78
GYPC-206ENST00000484700 GPRASP1Q5JY77 1395 aa26.17■■□□□ 1.78
GYPC-206ENST00000484700 BCL9LQ86UU0 1499 aa26.17■■□□□ 1.78
GYPC-206ENST00000484700 PLEKHG5O94827 1062 aa26.15■■□□□ 1.78
GYPC-206ENST00000484700 UNC5CLQ8IV45 518 aa26.15■■□□□ 1.78
GYPC-206ENST00000484700 TULP4Q9NRJ4 1543 aa26.14■■□□□ 1.78
GYPC-206ENST00000484700 USP32Q8NFA0 1604 aa26.14■■□□□ 1.78
GYPC-206ENST00000484700 CABLES1Q8TDN4 633 aa26.14■■□□□ 1.78
GYPC-206ENST00000484700 GJD4Q96KN9 370 aaPredicted RBP26.14■■□□□ 1.78
GYPC-206ENST00000484700 ATAD2Q6PL18 1390 aa26.14■■□□□ 1.78
GYPC-206ENST00000484700 NGDNQ8NEJ9 315 aaKnown RBP26.13■■□□□ 1.77
GYPC-206ENST00000484700 PRR36Q9H6K5 1346 aa26.13■■□□□ 1.77
GYPC-206ENST00000484700 SLIT2O94813 1529 aa26.09■■□□□ 1.77
GYPC-206ENST00000484700 NUDT16Q96DE0 195 aaKnown RBP26.08■■□□□ 1.77
GYPC-206ENST00000484700 ARHGEF28Q8N1W1 1705 aaKnown RBP26.08■■□□□ 1.76
GYPC-206ENST00000484700 KIAA1210Q9ULL0 1709 aa26.08■■□□□ 1.76
GYPC-206ENST00000484700 PAK3O75914 559 aaPredicted RBP26.06■■□□□ 1.76
GYPC-206ENST00000484700 CDK19Q9BWU1 502 aa26.06■■□□□ 1.76
GYPC-206ENST00000484700 TNKS1BP1Q9C0C2 1729 aaKnown RBP26.05■■□□□ 1.76
GYPC-206ENST00000484700 NBPF1Q3BBV0 1214 aa26.04■■□□□ 1.76
GYPC-206ENST00000484700 CCDC9Q9Y3X0 531 aaKnown RBP26.03■■□□□ 1.76
GYPC-206ENST00000484700 RALGAPBQ86X10 1494 aa26.03■■□□□ 1.76
GYPC-206ENST00000484700 VPS72Q15906 364 aa26.02■■□□□ 1.76
GYPC-206ENST00000484700 FAM83GA6ND36 823 aa26.01■■□□□ 1.75
GYPC-206ENST00000484700 ATP7BP35670 1465 aa26.01■■□□□ 1.75
GYPC-206ENST00000484700 TRPM3Q9HCF6 1732 aaPredicted RBP26.01■■□□□ 1.75
GYPC-206ENST00000484700 ITSN1Q15811 1721 aa26■■□□□ 1.75
GYPC-206ENST00000484700 CCDC61Q9Y6R9 512 aa26■■□□□ 1.75
GYPC-206ENST00000484700 L3MBTL2Q969R5 705 aa25.99■■□□□ 1.75
GYPC-206ENST00000484700 ABCA3Q99758 1704 aa25.98■■□□□ 1.75
GYPC-206ENST00000484700 CCDC125Q86Z20 511 aa25.98■■□□□ 1.75
GYPC-206ENST00000484700 NWD2Q9ULI1 1742 aa25.97■■□□□ 1.75
GYPC-206ENST00000484700 CENPJQ9HC77 1338 aaPredicted RBP25.97■■□□□ 1.75
GYPC-206ENST00000484700 ALS2Q96Q42 1657 aa25.96■■□□□ 1.75
GYPC-206ENST00000484700 GLI3P10071 1580 aa25.96■■□□□ 1.75
GYPC-206ENST00000484700 PLCH1Q4KWH8 1693 aa25.96■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms