RNA–Protein interactions for RNA: ENST00000484596.1

UBR3-210, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 2

Gene UBR3, Length 791 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-210ENST00000484596 BEGAINQ9BUH8 593 aa14.58□□□□□ -0.08
UBR3-210ENST00000484596 FCF1Q9Y324 198 aaKnown RBP14.58□□□□□ -0.08
UBR3-210ENST00000484596 LAPTM4AQ15012 233 aa14.57□□□□□ -0.08
UBR3-210ENST00000484596 MS4A1P11836 297 aa14.55□□□□□ -0.08
UBR3-210ENST00000484596 PDE4DQ08499 809 aa14.55□□□□□ -0.08
UBR3-210ENST00000484596 ZNF598Q86UK7 904 aaKnown RBP14.55□□□□□ -0.08
UBR3-210ENST00000484596 SYMPKQ92797 1274 aaKnown RBP14.55□□□□□ -0.08
UBR3-210ENST00000484596 PDZRN3Q9UPQ7 1066 aa14.55□□□□□ -0.08
UBR3-210ENST00000484596 Q6ZNB5 142 aa14.54□□□□□ -0.08
UBR3-210ENST00000484596 FDX1P10109 184 aa14.53□□□□□ -0.08
UBR3-210ENST00000484596 PCDHGC3Q9UN70 934 aa14.53□□□□□ -0.08
UBR3-210ENST00000484596 NRG2O14511 850 aaPredicted RBP14.52□□□□□ -0.09
UBR3-210ENST00000484596 NDUFV2P19404 249 aa14.52□□□□□ -0.09
UBR3-210ENST00000484596 MMP16P51512 607 aa14.52□□□□□ -0.09
UBR3-210ENST00000484596 MOXD2PA6NHM9 499 aa14.51□□□□□ -0.09
UBR3-210ENST00000484596 ZNF697Q5TEC3 545 aa14.51□□□□□ -0.09
UBR3-210ENST00000484596 TRIM67Q6ZTA4 783 aa14.51□□□□□ -0.09
UBR3-210ENST00000484596 DXOO77932 396 aaKnown RBP14.49□□□□□ -0.09
UBR3-210ENST00000484596 RPIAP49247 311 aa14.48□□□□□ -0.09
UBR3-210ENST00000484596 TBC1D2Q9BYX2 928 aa14.48□□□□□ -0.09
UBR3-210ENST00000484596 C6orf229H3BNL8 230 aa14.46□□□□□ -0.09
UBR3-210ENST00000484596 RETREG3Q86VR2 466 aa14.46□□□□□ -0.09
UBR3-210ENST00000484596 GDF9O60383 454 aa14.43□□□□□ -0.1
UBR3-210ENST00000484596 CD2BP2O95400 341 aaKnown RBP14.43□□□□□ -0.1
UBR3-210ENST00000484596 DIXDC1Q155Q3 683 aa14.43□□□□□ -0.1
UBR3-210ENST00000484596 ZBTB24O43167 697 aaPredicted RBP14.42□□□□□ -0.1
UBR3-210ENST00000484596 JUNDP17535 347 aa14.42□□□□□ -0.1
UBR3-210ENST00000484596 PRR20EP86478 221 aa14.42□□□□□ -0.1
UBR3-210ENST00000484596 PRR20CP86479 221 aa14.42□□□□□ -0.1
UBR3-210ENST00000484596 PRR20DP86480 221 aa14.42□□□□□ -0.1
UBR3-210ENST00000484596 PRR20BP86481 221 aa14.42□□□□□ -0.1
UBR3-210ENST00000484596 PRR20AP86496 221 aa14.42□□□□□ -0.1
UBR3-210ENST00000484596 TNFRSF10AO00220 468 aa14.41□□□□□ -0.1
UBR3-210ENST00000484596 LCE2BO14633 110 aa14.41□□□□□ -0.1
UBR3-210ENST00000484596 RSBN1LQ6PCB5 846 aaPredicted RBP14.4□□□□□ -0.1
UBR3-210ENST00000484596 CCDC24Q8N4L8 307 aa14.4□□□□□ -0.1
UBR3-210ENST00000484596 GJA5P36382 358 aa14.39□□□□□ -0.11
UBR3-210ENST00000484596 FOXC1Q12948 553 aa14.39□□□□□ -0.11
UBR3-210ENST00000484596 PKD2L1Q9P0L9 805 aa14.39□□□□□ -0.11
UBR3-210ENST00000484596 SPTLC1O15269 473 aa14.38□□□□□ -0.11
UBR3-210ENST00000484596 TRAF7Q6Q0C0 670 aa14.38□□□□□ -0.11
UBR3-210ENST00000484596 PCDHB15Q9Y5E8 787 aa14.38□□□□□ -0.11
UBR3-210ENST00000484596 MTMR2Q13614 643 aa14.37□□□□□ -0.11
UBR3-210ENST00000484596 RIC3Q7Z5B4 369 aa14.36□□□□□ -0.11
UBR3-210ENST00000484596 TRIM32Q13049 653 aa14.35□□□□□ -0.11
UBR3-210ENST00000484596 PRR7Q8TB68 274 aa14.35□□□□□ -0.11
UBR3-210ENST00000484596 SPDYE5A6NIY4 337 aa14.34□□□□□ -0.11
UBR3-210ENST00000484596 MYSM1Q5VVJ2 828 aa14.33□□□□□ -0.12
UBR3-210ENST00000484596 NUDT12Q9BQG2 462 aa14.33□□□□□ -0.12
UBR3-210ENST00000484596 GPBP1L1Q9HC44 474 aaPredicted RBP14.31□□□□□ -0.12
UBR3-210ENST00000484596 CSPP1Q1MSJ5 1256 aa14.3□□□□□ -0.12
UBR3-210ENST00000484596 PTCRAQ6ISU1 281 aaPredicted RBP14.3□□□□□ -0.12
UBR3-210ENST00000484596 LIMD1Q9UGP4 676 aa14.3□□□□□ -0.12
UBR3-210ENST00000484596 HRCP23327 699 aa14.29□□□□□ -0.12
UBR3-210ENST00000484596 PKDCCQ504Y2 493 aa14.29□□□□□ -0.12
UBR3-210ENST00000484596 FAM187AA6NFU0 413 aa14.28□□□□□ -0.12
UBR3-210ENST00000484596 DGAT1O75907 488 aa14.28□□□□□ -0.12
UBR3-210ENST00000484596 CABLES1Q8TDN4 633 aa14.28□□□□□ -0.12
UBR3-210ENST00000484596 ZBTB3Q9H5J0 574 aa14.28□□□□□ -0.12
UBR3-210ENST00000484596 CFAP99D6REC4 459 aa14.27□□□□□ -0.13
UBR3-210ENST00000484596 CCNYL3P0C7X3 344 aa14.27□□□□□ -0.13
UBR3-210ENST00000484596 PTPRNQ16849 979 aa14.27□□□□□ -0.13
UBR3-210ENST00000484596 PRPF38BQ5VTL8 546 aaKnown RBP14.27□□□□□ -0.13
UBR3-210ENST00000484596 DESI1Q6ICB0 168 aa14.27□□□□□ -0.13
UBR3-210ENST00000484596 KDM4CQ9H3R0 1056 aa14.27□□□□□ -0.13
UBR3-210ENST00000484596 TOR4AQ9NXH8 423 aa14.26□□□□□ -0.13
UBR3-210ENST00000484596 WNT7AO00755 349 aa14.25□□□□□ -0.13
UBR3-210ENST00000484596 BRPF1P55201 1214 aaPredicted RBP14.24□□□□□ -0.13
UBR3-210ENST00000484596 SKOR1P84550 965 aa14.24□□□□□ -0.13
UBR3-210ENST00000484596 NEUROD2Q15784 382 aa14.24□□□□□ -0.13
UBR3-210ENST00000484596 QPCTQ16769 361 aa14.24□□□□□ -0.13
UBR3-210ENST00000484596 CYP4X1Q8N118 509 aa14.24□□□□□ -0.13
UBR3-210ENST00000484596 RSPH6AQ9H0K4 717 aa14.24□□□□□ -0.13
UBR3-210ENST00000484596 EVA1BQ9NVM1 165 aa14.24□□□□□ -0.13
UBR3-210ENST00000484596 MYT1Q01538 1121 aa14.23□□□□□ -0.13
UBR3-210ENST00000484596 TUSC1Q2TAM9 212 aa14.23□□□□□ -0.13
UBR3-210ENST00000484596 POLR3EQ9NVU0 708 aa14.23□□□□□ -0.13
UBR3-210ENST00000484596 MRGPRX2Q96LB1 330 aa14.22□□□□□ -0.13
UBR3-210ENST00000484596 CLK2P49760 499 aaKnown RBP14.21□□□□□ -0.13
UBR3-210ENST00000484596 WNT7BP56706 349 aa14.21□□□□□ -0.13
UBR3-210ENST00000484596 FAM117AQ9C073 453 aa14.21□□□□□ -0.13
UBR3-210ENST00000484596 NUTM2BA6NNL0 878 aaPredicted RBP14.2□□□□□ -0.14
UBR3-210ENST00000484596 NUTM2EB1AL46 878 aaPredicted RBP14.2□□□□□ -0.14
UBR3-210ENST00000484596 LILRB3O75022 631 aa14.2□□□□□ -0.14
UBR3-210ENST00000484596 KCNH2Q12809 1159 aa14.2□□□□□ -0.14
UBR3-210ENST00000484596 RC3H1Q5TC82 1133 aaKnown RBP14.2□□□□□ -0.14
UBR3-210ENST00000484596 NUTM2DQ5VT03 806 aaPredicted RBP14.2□□□□□ -0.14
UBR3-210ENST00000484596 LYPD8Q6UX82 237 aa14.2□□□□□ -0.14
UBR3-210ENST00000484596 NUTM2AQ8IVF1 878 aaPredicted RBP14.2□□□□□ -0.14
UBR3-210ENST00000484596 TTC24A2A3L6 582 aaPredicted RBP14.18□□□□□ -0.14
UBR3-210ENST00000484596 UNC93B1Q9H1C4 597 aa14.18□□□□□ -0.14
UBR3-210ENST00000484596 SNIP1Q8TAD8 396 aaKnown RBP14.17□□□□□ -0.14
UBR3-210ENST00000484596 RTL5Q5HYW3 569 aaPredicted RBP14.16□□□□□ -0.14
UBR3-210ENST00000484596 DDRGK1Q96HY6 314 aa14.16□□□□□ -0.14
UBR3-210ENST00000484596 TMEM132AQ24JP5 1023 aa14.15□□□□□ -0.14
UBR3-210ENST00000484596 TSC1Q92574 1164 aa14.15□□□□□ -0.14
UBR3-210ENST00000484596 PLEKHG3A1L390 1219 aa14.14□□□□□ -0.15
UBR3-210ENST00000484596 CTHP32929 405 aa14.14□□□□□ -0.15
UBR3-210ENST00000484596 SH3BP2P78314 561 aa14.14□□□□□ -0.15
UBR3-210ENST00000484596 PER1O15534 1290 aaPredicted RBP14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms