RNA–Protein interactions for RNA: ENST00000484538.1

MDH1-211, Transcript of malate dehydrogenase 1, humanhuman

TSL 2

Gene MDH1, Length 910 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1-211ENST00000484538 PRKD2Q9BZL6 878 aa13.52□□□□□ -0.25
MDH1-211ENST00000484538 MSS51Q4VC12 460 aa13.51□□□□□ -0.25
MDH1-211ENST00000484538 RSPH6AQ9H0K4 717 aa13.51□□□□□ -0.25
MDH1-211ENST00000484538 GOPCQ9HD26 462 aa13.51□□□□□ -0.25
MDH1-211ENST00000484538 Q3C1V9 767 aa13.5□□□□□ -0.25
MDH1-211ENST00000484538 PCDHGC3Q9UN70 934 aa13.5□□□□□ -0.25
MDH1-211ENST00000484538 V9GY48 417 aaPredicted RBP13.5□□□□□ -0.25
MDH1-211ENST00000484538 DIXDC1Q155Q3 683 aa13.49□□□□□ -0.25
MDH1-211ENST00000484538 PRDM9Q9NQV7 894 aa13.49□□□□□ -0.25
MDH1-211ENST00000484538 MOXD2PA6NHM9 499 aa13.48□□□□□ -0.25
MDH1-211ENST00000484538 SH3D19Q5HYK7 790 aa13.48□□□□□ -0.25
MDH1-211ENST00000484538 PLA2G2CQ5R387 149 aa13.48□□□□□ -0.25
MDH1-211ENST00000484538 NDUFV2P19404 249 aa13.47□□□□□ -0.25
MDH1-211ENST00000484538 TBC1D2Q9BYX2 928 aa13.47□□□□□ -0.25
MDH1-211ENST00000484538 FDX1P10109 184 aa13.46□□□□□ -0.25
MDH1-211ENST00000484538 SYMPKQ92797 1274 aaKnown RBP13.45□□□□□ -0.26
MDH1-211ENST00000484538 USB1Q9BQ65 265 aaKnown RBP13.45□□□□□ -0.26
MDH1-211ENST00000484538 MMP16P51512 607 aa13.44□□□□□ -0.26
MDH1-211ENST00000484538 LIAT1Q6ZQX7 453 aa13.44□□□□□ -0.26
MDH1-211ENST00000484538 GTF3C3Q9Y5Q9 886 aa13.44□□□□□ -0.26
MDH1-211ENST00000484538 SKIV2LQ15477 1246 aaKnown RBP13.43□□□□□ -0.26
MDH1-211ENST00000484538 MYSM1Q5VVJ2 828 aa13.42□□□□□ -0.26
MDH1-211ENST00000484538 PCMTD1Q96MG8 357 aaPredicted RBP13.42□□□□□ -0.26
MDH1-211ENST00000484538 GJA5P36382 358 aa13.41□□□□□ -0.26
MDH1-211ENST00000484538 SLC19A1P41440 591 aa13.41□□□□□ -0.26
MDH1-211ENST00000484538 RSBN1LQ6PCB5 846 aaPredicted RBP13.41□□□□□ -0.26
MDH1-211ENST00000484538 FCF1Q9Y324 198 aaKnown RBP13.41□□□□□ -0.26
MDH1-211ENST00000484538 DXOO77932 396 aaKnown RBP13.4□□□□□ -0.26
MDH1-211ENST00000484538 SPTLC1O15269 473 aa13.39□□□□□ -0.27
MDH1-211ENST00000484538 SPRYD7Q5W111 196 aa13.38□□□□□ -0.27
MDH1-211ENST00000484538 RETREG3Q86VR2 466 aa13.38□□□□□ -0.27
MDH1-211ENST00000484538 IRX2Q9BZI1 471 aaPredicted RBP13.38□□□□□ -0.27
MDH1-211ENST00000484538 POLR3EQ9NVU0 708 aa13.38□□□□□ -0.27
MDH1-211ENST00000484538 CLK2P49760 499 aaKnown RBP13.37□□□□□ -0.27
MDH1-211ENST00000484538 PCDHB15Q9Y5E8 787 aa13.37□□□□□ -0.27
MDH1-211ENST00000484538 RIC3Q7Z5B4 369 aa13.35□□□□□ -0.27
MDH1-211ENST00000484538 C6orf229H3BNL8 230 aa13.34□□□□□ -0.27
MDH1-211ENST00000484538 TRIM67Q6ZTA4 783 aa13.34□□□□□ -0.27
MDH1-211ENST00000484538 LIMD1Q9UGP4 676 aa13.34□□□□□ -0.27
MDH1-211ENST00000484538 ATP1B4Q9UN42 357 aaPredicted RBP13.34□□□□□ -0.27
MDH1-211ENST00000484538 JUNDP17535 347 aa13.33□□□□□ -0.28
MDH1-211ENST00000484538 TUSC1Q2TAM9 212 aa13.32□□□□□ -0.28
MDH1-211ENST00000484538 ZNF598Q86UK7 904 aaKnown RBP13.32□□□□□ -0.28
MDH1-211ENST00000484538 PROCA1Q8NCQ7 364 aaPredicted RBP13.32□□□□□ -0.28
MDH1-211ENST00000484538 RPIAP49247 311 aa13.31□□□□□ -0.28
MDH1-211ENST00000484538 MTMR2Q13614 643 aa13.31□□□□□ -0.28
MDH1-211ENST00000484538 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.3□□□□□ -0.28
MDH1-211ENST00000484538 HRCP23327 699 aa13.29□□□□□ -0.28
MDH1-211ENST00000484538 SPDYE5A6NIY4 337 aa13.28□□□□□ -0.28
MDH1-211ENST00000484538 PRPF38BQ5VTL8 546 aaKnown RBP13.28□□□□□ -0.28
MDH1-211ENST00000484538 PRR7Q8TB68 274 aa13.28□□□□□ -0.28
MDH1-211ENST00000484538 ZNF697Q5TEC3 545 aa13.27□□□□□ -0.29
MDH1-211ENST00000484538 GFRA3O60609 400 aa13.26□□□□□ -0.29
MDH1-211ENST00000484538 CABLES1Q8TDN4 633 aa13.26□□□□□ -0.29
MDH1-211ENST00000484538 CFAP99D6REC4 459 aa13.25□□□□□ -0.29
MDH1-211ENST00000484538 GDF9O60383 454 aa13.25□□□□□ -0.29
MDH1-211ENST00000484538 LILRB3O75022 631 aa13.25□□□□□ -0.29
MDH1-211ENST00000484538 QPCTQ16769 361 aa13.25□□□□□ -0.29
MDH1-211ENST00000484538 DESI1Q6ICB0 168 aa13.25□□□□□ -0.29
MDH1-211ENST00000484538 ZBTB3Q9H5J0 574 aa13.25□□□□□ -0.29
MDH1-211ENST00000484538 CSPP1Q1MSJ5 1256 aa13.24□□□□□ -0.29
MDH1-211ENST00000484538 PRR20EP86478 221 aa13.23□□□□□ -0.29
MDH1-211ENST00000484538 PRR20CP86479 221 aa13.23□□□□□ -0.29
MDH1-211ENST00000484538 PRR20DP86480 221 aa13.23□□□□□ -0.29
MDH1-211ENST00000484538 PRR20BP86481 221 aa13.23□□□□□ -0.29
MDH1-211ENST00000484538 PRR20AP86496 221 aa13.23□□□□□ -0.29
MDH1-211ENST00000484538 LAPTM4AQ15012 233 aa13.23□□□□□ -0.29
MDH1-211ENST00000484538 NUDT12Q9BQG2 462 aa13.23□□□□□ -0.29
MDH1-211ENST00000484538 PKD2L1Q9P0L9 805 aa13.23□□□□□ -0.29
MDH1-211ENST00000484538 PDZRN3Q9UPQ7 1066 aa13.23□□□□□ -0.29
MDH1-211ENST00000484538 NRG2O14511 850 aaPredicted RBP13.22□□□□□ -0.29
MDH1-211ENST00000484538 PPP2R2DQ66LE6 453 aa13.22□□□□□ -0.29
MDH1-211ENST00000484538 PTPRNQ16849 979 aa13.21□□□□□ -0.29
MDH1-211ENST00000484538 PTCRAQ6ISU1 281 aaPredicted RBP13.21□□□□□ -0.29
MDH1-211ENST00000484538 CCDC24Q8N4L8 307 aa13.21□□□□□ -0.29
MDH1-211ENST00000484538 CD2BP2O95400 341 aaKnown RBP13.2□□□□□ -0.3
MDH1-211ENST00000484538 TRIM32Q13049 653 aa13.2□□□□□ -0.3
MDH1-211ENST00000484538 LCE2BO14633 110 aa13.19□□□□□ -0.3
MDH1-211ENST00000484538 ZBTB24O43167 697 aaPredicted RBP13.19□□□□□ -0.3
MDH1-211ENST00000484538 FBXO31Q5XUX0 539 aaPredicted RBP13.19□□□□□ -0.3
MDH1-211ENST00000484538 NUTM2BA6NNL0 878 aaPredicted RBP13.18□□□□□ -0.3
MDH1-211ENST00000484538 NUTM2EB1AL46 878 aaPredicted RBP13.18□□□□□ -0.3
MDH1-211ENST00000484538 CCNYL3P0C7X3 344 aa13.18□□□□□ -0.3
MDH1-211ENST00000484538 RTL5Q5HYW3 569 aaPredicted RBP13.18□□□□□ -0.3
MDH1-211ENST00000484538 NUTM2DQ5VT03 806 aaPredicted RBP13.18□□□□□ -0.3
MDH1-211ENST00000484538 LYPD8Q6UX82 237 aa13.18□□□□□ -0.3
MDH1-211ENST00000484538 ERICH6Q7L0X2 663 aa13.18□□□□□ -0.3
MDH1-211ENST00000484538 NUTM2AQ8IVF1 878 aaPredicted RBP13.18□□□□□ -0.3
MDH1-211ENST00000484538 EVA1BQ9NVM1 165 aa13.18□□□□□ -0.3
MDH1-211ENST00000484538 RFC5P40937 340 aa13.17□□□□□ -0.3
MDH1-211ENST00000484538 TNFRSF10AO00220 468 aa13.16□□□□□ -0.3
MDH1-211ENST00000484538 SKOR1P84550 965 aa13.14□□□□□ -0.31
MDH1-211ENST00000484538 TMEM259Q4ZIN3 620 aa13.14□□□□□ -0.31
MDH1-211ENST00000484538 PER1O15534 1290 aaPredicted RBP13.13□□□□□ -0.31
MDH1-211ENST00000484538 KCNH2Q12809 1159 aa13.13□□□□□ -0.31
MDH1-211ENST00000484538 Q6ZNB5 142 aa13.13□□□□□ -0.31
MDH1-211ENST00000484538 F12P00748 615 aaPredicted RBP13.12□□□□□ -0.31
MDH1-211ENST00000484538 FOXC1Q12948 553 aa13.12□□□□□ -0.31
MDH1-211ENST00000484538 FLIIQ13045 1269 aa13.12□□□□□ -0.31
MDH1-211ENST00000484538 WNT7AO00755 349 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms