RNA–Protein interactions for RNA: ENST00000484520.1

SPTA1-206, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 3

Gene SPTA1, Length 769 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-206ENST00000484520 TTC24A2A3L6 582 aaPredicted RBP8.83□□□□□ -1
SPTA1-206ENST00000484520 CTC1Q2NKJ3 1217 aa8.82□□□□□ -1
SPTA1-206ENST00000484520 LCE2AQ5TA79 106 aaPredicted RBP8.82□□□□□ -1
SPTA1-206ENST00000484520 CD46P15529 392 aa8.81□□□□□ -1
SPTA1-206ENST00000484520 Q3C1V9 767 aa8.81□□□□□ -1
SPTA1-206ENST00000484520 C11orf95C9JLR9 678 aaPredicted RBP8.8□□□□□ -1
SPTA1-206ENST00000484520 WNT7AO00755 349 aa8.8□□□□□ -1
SPTA1-206ENST00000484520 SMCPP49901 116 aaPredicted RBP8.8□□□□□ -1
SPTA1-206ENST00000484520 MMP16P51512 607 aa8.8□□□□□ -1
SPTA1-206ENST00000484520 TRIM32Q13049 653 aa8.8□□□□□ -1
SPTA1-206ENST00000484520 SMPD1P17405 629 aa8.78□□□□□ -1
SPTA1-206ENST00000484520 SNIP1Q8TAD8 396 aaKnown RBP8.78□□□□□ -1
SPTA1-206ENST00000484520 KDM4AO75164 1064 aa8.77□□□□□ -1.01
SPTA1-206ENST00000484520 HLA-CQ95604 372 aa8.77□□□□□ -1.01
SPTA1-206ENST00000484520 MRGPRX2Q96LB1 330 aa8.77□□□□□ -1.01
SPTA1-206ENST00000484520 USB1Q9BQ65 265 aaKnown RBP8.77□□□□□ -1.01
SPTA1-206ENST00000484520 J3QL48 77 aa8.76□□□□□ -1.01
SPTA1-206ENST00000484520 WFS1O76024 890 aa8.76□□□□□ -1.01
SPTA1-206ENST00000484520 DXOO77932 396 aaKnown RBP8.76□□□□□ -1.01
SPTA1-206ENST00000484520 MAP2K5Q13163 448 aa8.76□□□□□ -1.01
SPTA1-206ENST00000484520 MDM2Q00987 491 aaPredicted RBP8.75□□□□□ -1.01
SPTA1-206ENST00000484520 CCDC24Q8N4L8 307 aa8.75□□□□□ -1.01
SPTA1-206ENST00000484520 IRF6O14896 467 aa8.74□□□□□ -1.01
SPTA1-206ENST00000484520 HAP1P54257 671 aaPredicted RBP8.74□□□□□ -1.01
SPTA1-206ENST00000484520 ATP13A2Q9NQ11 1180 aa8.73□□□□□ -1.01
SPTA1-206ENST00000484520 USP46P62068 366 aa8.72□□□□□ -1.01
SPTA1-206ENST00000484520 NFX1Q12986 1120 aaKnown RBP8.72□□□□□ -1.01
SPTA1-206ENST00000484520 KDM2AQ9Y2K7 1162 aa8.72□□□□□ -1.01
SPTA1-206ENST00000484520 HOXA2O43364 376 aa8.71□□□□□ -1.02
SPTA1-206ENST00000484520 SNRPBP14678 240 aaKnown RBP8.71□□□□□ -1.02
SPTA1-206ENST00000484520 SKOR1P84550 965 aa8.71□□□□□ -1.02
SPTA1-206ENST00000484520 GUCA2AQ02747 115 aa8.71□□□□□ -1.02
SPTA1-206ENST00000484520 RC3H1Q5TC82 1133 aaKnown RBP8.71□□□□□ -1.02
SPTA1-206ENST00000484520 HPS1Q92902 700 aa8.71□□□□□ -1.02
SPTA1-206ENST00000484520 REPIN1Q9BWE0 567 aaKnown RBP8.71□□□□□ -1.02
SPTA1-206ENST00000484520 MINK1Q8N4C8 1332 aaPredicted RBP8.7□□□□□ -1.02
SPTA1-206ENST00000484520 SYMPKQ92797 1274 aaKnown RBP8.69□□□□□ -1.02
SPTA1-206ENST00000484520 WNT7BP56706 349 aa8.68□□□□□ -1.02
SPTA1-206ENST00000484520 CCDC102AQ96A19 550 aa8.68□□□□□ -1.02
SPTA1-206ENST00000484520 SENP2Q9HC62 589 aa8.68□□□□□ -1.02
SPTA1-206ENST00000484520 JUNDP17535 347 aa8.67□□□□□ -1.02
SPTA1-206ENST00000484520 TRIM47Q96LD4 638 aa8.67□□□□□ -1.02
SPTA1-206ENST00000484520 TULP1O00294 542 aaPredicted RBP8.66□□□□□ -1.02
SPTA1-206ENST00000484520 GPCPD1Q9NPB8 672 aa8.66□□□□□ -1.02
SPTA1-206ENST00000484520 TERTO14746 1132 aaKnown RBP8.65□□□□□ -1.02
SPTA1-206ENST00000484520 WIPF1O43516 503 aa8.65□□□□□ -1.02
SPTA1-206ENST00000484520 ALDH1A1P00352 501 aa8.65□□□□□ -1.02
SPTA1-206ENST00000484520 FAM217BQ9NTX9 383 aaPredicted RBP8.65□□□□□ -1.02
SPTA1-206ENST00000484520 CLCN1P35523 988 aa8.64□□□□□ -1.03
SPTA1-206ENST00000484520 LCE2CQ5TA81 110 aa8.64□□□□□ -1.03
SPTA1-206ENST00000484520 PTCRAQ6ISU1 281 aaPredicted RBP8.64□□□□□ -1.03
SPTA1-206ENST00000484520 NUTM1Q86Y26 1132 aa8.64□□□□□ -1.03
SPTA1-206ENST00000484520 RETREG3Q86VR2 466 aa8.63□□□□□ -1.03
SPTA1-206ENST00000484520 KIFC2Q96AC6 838 aa8.63□□□□□ -1.03
SPTA1-206ENST00000484520 NUDT12Q9BQG2 462 aa8.63□□□□□ -1.03
SPTA1-206ENST00000484520 INSM1Q01101 510 aaPredicted RBP8.62□□□□□ -1.03
SPTA1-206ENST00000484520 STK17AQ9UEE5 414 aa8.62□□□□□ -1.03
SPTA1-206ENST00000484520 SIAH2O43255 324 aa8.61□□□□□ -1.03
SPTA1-206ENST00000484520 KRI1Q8N9T8 703 aaKnown RBP8.61□□□□□ -1.03
SPTA1-206ENST00000484520 EHBP1Q8NDI1 1231 aa8.61□□□□□ -1.03
SPTA1-206ENST00000484520 FDX1P10109 184 aa8.6□□□□□ -1.03
SPTA1-206ENST00000484520 PCDHGC3Q9UN70 934 aa8.6□□□□□ -1.03
SPTA1-206ENST00000484520 C6orf229H3BNL8 230 aa8.59□□□□□ -1.03
SPTA1-206ENST00000484520 WASF2Q9Y6W5 498 aa8.58□□□□□ -1.04
SPTA1-206ENST00000484520 MS4A1P11836 297 aa8.57□□□□□ -1.04
SPTA1-206ENST00000484520 BMP1P13497 986 aa8.57□□□□□ -1.04
SPTA1-206ENST00000484520 SH3BP2P78314 561 aa8.57□□□□□ -1.04
SPTA1-206ENST00000484520 CAPN5O15484 640 aaPredicted RBP8.56□□□□□ -1.04
SPTA1-206ENST00000484520 CCNYL3P0C7X3 344 aa8.56□□□□□ -1.04
SPTA1-206ENST00000484520 SSTR3P32745 418 aaPredicted RBP8.56□□□□□ -1.04
SPTA1-206ENST00000484520 TRIM46Q7Z4K8 759 aa8.56□□□□□ -1.04
SPTA1-206ENST00000484520 NDUFV2P19404 249 aa8.55□□□□□ -1.04
SPTA1-206ENST00000484520 SPIRE2Q8WWL2 714 aa8.55□□□□□ -1.04
SPTA1-206ENST00000484520 LINC01559Q495D7 138 aa8.54□□□□□ -1.04
SPTA1-206ENST00000484520 VSIG10Q8N0Z9 540 aa8.54□□□□□ -1.04
SPTA1-206ENST00000484520 SLC16A10Q8TF71 515 aa8.54□□□□□ -1.04
SPTA1-206ENST00000484520 UNC93B1Q9H1C4 597 aa8.54□□□□□ -1.04
SPTA1-206ENST00000484520 NXF1Q9UBU9 619 aaKnown RBP8.54□□□□□ -1.04
SPTA1-206ENST00000484520 MOXD2PA6NHM9 499 aa8.53□□□□□ -1.04
SPTA1-206ENST00000484520 PTPRNQ16849 979 aa8.53□□□□□ -1.04
SPTA1-206ENST00000484520 BAP1Q92560 729 aa8.53□□□□□ -1.04
SPTA1-206ENST00000484520 EVA1BQ9NVM1 165 aa8.53□□□□□ -1.04
SPTA1-206ENST00000484520 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.52□□□□□ -1.05
SPTA1-206ENST00000484520 TLL2Q9Y6L7 1015 aa8.52□□□□□ -1.05
SPTA1-206ENST00000484520 KCNH2Q12809 1159 aa8.51□□□□□ -1.05
SPTA1-206ENST00000484520 PRR7Q8TB68 274 aa8.51□□□□□ -1.05
SPTA1-206ENST00000484520 VEGFBP49765 207 aa8.5□□□□□ -1.05
SPTA1-206ENST00000484520 GMPRP36959 345 aa8.49□□□□□ -1.05
SPTA1-206ENST00000484520 MTMR2Q13614 643 aa8.49□□□□□ -1.05
SPTA1-206ENST00000484520 TTLL12Q14166 644 aaPredicted RBP8.49□□□□□ -1.05
SPTA1-206ENST00000484520 ZFP42Q96MM3 310 aa8.49□□□□□ -1.05
SPTA1-206ENST00000484520 ZNF511Q8NB15 262 aa8.48□□□□□ -1.05
SPTA1-206ENST00000484520 PLEKHG3A1L390 1219 aa8.47□□□□□ -1.05
SPTA1-206ENST00000484520 VARSP26640 1264 aaKnown RBP8.47□□□□□ -1.05
SPTA1-206ENST00000484520 NNTQ13423 1086 aa8.47□□□□□ -1.05
SPTA1-206ENST00000484520 IRF7Q92985 503 aa8.47□□□□□ -1.05
SPTA1-206ENST00000484520 SPDYE5A6NIY4 337 aa8.46□□□□□ -1.06
SPTA1-206ENST00000484520 DESI1Q6ICB0 168 aa8.46□□□□□ -1.06
SPTA1-206ENST00000484520 GIGYF2Q6Y7W6 1299 aaKnown RBP8.46□□□□□ -1.06
SPTA1-206ENST00000484520 BARGINQ6ZT62 677 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms