RNA–Protein interactions for RNA: ENST00000484441.1

CCDC66-219, Transcript of coiled-coil domain containing 66, humanhuman

TSL 1 (best)

Gene CCDC66, Length 302 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-219ENST00000484441 PRKCSHP14314 528 aaPredicted RBP11.64□□□□□ -0.55
CCDC66-219ENST00000484441 MYSM1Q5VVJ2 828 aa11.64□□□□□ -0.55
CCDC66-219ENST00000484441 RNF223E7ERA6 249 aa11.63□□□□□ -0.55
CCDC66-219ENST00000484441 DDRGK1Q96HY6 314 aa11.63□□□□□ -0.55
CCDC66-219ENST00000484441 FAM117AQ9C073 453 aa11.63□□□□□ -0.55
CCDC66-219ENST00000484441 ANKLE1Q8NAG6 615 aa11.62□□□□□ -0.55
CCDC66-219ENST00000484441 USB1Q9BQ65 265 aaKnown RBP11.62□□□□□ -0.55
CCDC66-219ENST00000484441 PLEKHG3A1L390 1219 aa11.61□□□□□ -0.55
CCDC66-219ENST00000484441 NEUROD2Q15784 382 aa11.61□□□□□ -0.55
CCDC66-219ENST00000484441 TUSC1Q2TAM9 212 aa11.61□□□□□ -0.55
CCDC66-219ENST00000484441 MMP16P51512 607 aa11.6□□□□□ -0.55
CCDC66-219ENST00000484441 RETREG3Q86VR2 466 aa11.6□□□□□ -0.55
CCDC66-219ENST00000484441 PRDM9Q9NQV7 894 aa11.6□□□□□ -0.55
CCDC66-219ENST00000484441 RIC3Q7Z5B4 369 aa11.59□□□□□ -0.55
CCDC66-219ENST00000484441 RSPH6AQ9H0K4 717 aa11.59□□□□□ -0.55
CCDC66-219ENST00000484441 SYMPKQ92797 1274 aaKnown RBP11.58□□□□□ -0.56
CCDC66-219ENST00000484441 LIMD1Q9UGP4 676 aa11.58□□□□□ -0.56
CCDC66-219ENST00000484441 DXOO77932 396 aaKnown RBP11.57□□□□□ -0.56
CCDC66-219ENST00000484441 SH3D19Q5HYK7 790 aa11.57□□□□□ -0.56
CCDC66-219ENST00000484441 PRPF38BQ5VTL8 546 aaKnown RBP11.57□□□□□ -0.56
CCDC66-219ENST00000484441 PPEF1O14829 653 aaPredicted RBP11.56□□□□□ -0.56
CCDC66-219ENST00000484441 EMID1Q96A84 441 aaPredicted RBP11.56□□□□□ -0.56
CCDC66-219ENST00000484441 PCDHB15Q9Y5E8 787 aa11.56□□□□□ -0.56
CCDC66-219ENST00000484441 SPDYE5A6NIY4 337 aa11.55□□□□□ -0.56
CCDC66-219ENST00000484441 CLK2P49760 499 aaKnown RBP11.55□□□□□ -0.56
CCDC66-219ENST00000484441 MTMR2Q13614 643 aa11.55□□□□□ -0.56
CCDC66-219ENST00000484441 V9GY48 417 aaPredicted RBP11.55□□□□□ -0.56
CCDC66-219ENST00000484441 C6orf229H3BNL8 230 aa11.54□□□□□ -0.56
CCDC66-219ENST00000484441 HRCP23327 699 aa11.53□□□□□ -0.56
CCDC66-219ENST00000484441 PLA2G2CQ5R387 149 aa11.53□□□□□ -0.56
CCDC66-219ENST00000484441 ZBTB3Q9H5J0 574 aa11.53□□□□□ -0.56
CCDC66-219ENST00000484441 JUNDP17535 347 aa11.52□□□□□ -0.57
CCDC66-219ENST00000484441 SKIV2LQ15477 1246 aaKnown RBP11.52□□□□□ -0.57
CCDC66-219ENST00000484441 PRKD2Q9BZL6 878 aa11.52□□□□□ -0.57
CCDC66-219ENST00000484441 GOPCQ9HD26 462 aa11.52□□□□□ -0.57
CCDC66-219ENST00000484441 FCF1Q9Y324 198 aaKnown RBP11.52□□□□□ -0.57
CCDC66-219ENST00000484441 LILRB3O75022 631 aa11.51□□□□□ -0.57
CCDC66-219ENST00000484441 DESI1Q6ICB0 168 aa11.51□□□□□ -0.57
CCDC66-219ENST00000484441 QPCTQ16769 361 aa11.5□□□□□ -0.57
CCDC66-219ENST00000484441 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.5□□□□□ -0.57
CCDC66-219ENST00000484441 PRR7Q8TB68 274 aa11.49□□□□□ -0.57
CCDC66-219ENST00000484441 CABLES1Q8TDN4 633 aa11.49□□□□□ -0.57
CCDC66-219ENST00000484441 POLR3EQ9NVU0 708 aa11.49□□□□□ -0.57
CCDC66-219ENST00000484441 LIAT1Q6ZQX7 453 aa11.48□□□□□ -0.57
CCDC66-219ENST00000484441 CFAP99D6REC4 459 aa11.47□□□□□ -0.57
CCDC66-219ENST00000484441 SLC19A1P41440 591 aa11.46□□□□□ -0.57
CCDC66-219ENST00000484441 CSPP1Q1MSJ5 1256 aa11.46□□□□□ -0.57
CCDC66-219ENST00000484441 RPIAP49247 311 aa11.45□□□□□ -0.58
CCDC66-219ENST00000484441 PTPRNQ16849 979 aa11.45□□□□□ -0.58
CCDC66-219ENST00000484441 SPRYD7Q5W111 196 aa11.44□□□□□ -0.58
CCDC66-219ENST00000484441 PPP2R2DQ66LE6 453 aa11.44□□□□□ -0.58
CCDC66-219ENST00000484441 PROCA1Q8NCQ7 364 aaPredicted RBP11.44□□□□□ -0.58
CCDC66-219ENST00000484441 IL27Q8NEV9 243 aa11.44□□□□□ -0.58
CCDC66-219ENST00000484441 FBXO31Q5XUX0 539 aaPredicted RBP11.43□□□□□ -0.58
CCDC66-219ENST00000484441 NUDT12Q9BQG2 462 aa11.43□□□□□ -0.58
CCDC66-219ENST00000484441 RTL5Q5HYW3 569 aaPredicted RBP11.42□□□□□ -0.58
CCDC66-219ENST00000484441 LYPD8Q6UX82 237 aa11.41□□□□□ -0.58
CCDC66-219ENST00000484441 ZNF598Q86UK7 904 aaKnown RBP11.41□□□□□ -0.58
CCDC66-219ENST00000484441 NUTM2BA6NNL0 878 aaPredicted RBP11.4□□□□□ -0.58
CCDC66-219ENST00000484441 NUTM2EB1AL46 878 aaPredicted RBP11.4□□□□□ -0.58
CCDC66-219ENST00000484441 CCNYL3P0C7X3 344 aa11.4□□□□□ -0.58
CCDC66-219ENST00000484441 NUTM2DQ5VT03 806 aaPredicted RBP11.4□□□□□ -0.58
CCDC66-219ENST00000484441 NUTM2AQ8IVF1 878 aaPredicted RBP11.4□□□□□ -0.58
CCDC66-219ENST00000484441 EVA1BQ9NVM1 165 aa11.39□□□□□ -0.59
CCDC66-219ENST00000484441 F12P00748 615 aaPredicted RBP11.37□□□□□ -0.59
CCDC66-219ENST00000484441 TRIM32Q13049 653 aa11.36□□□□□ -0.59
CCDC66-219ENST00000484441 ZNF697Q5TEC3 545 aa11.36□□□□□ -0.59
CCDC66-219ENST00000484441 TRIM67Q6ZTA4 783 aa11.36□□□□□ -0.59
CCDC66-219ENST00000484441 CCDC24Q8N4L8 307 aa11.36□□□□□ -0.59
CCDC66-219ENST00000484441 HELBQ8NG08 1087 aaPredicted RBP11.36□□□□□ -0.59
CCDC66-219ENST00000484441 PCMTD1Q96MG8 357 aaPredicted RBP11.36□□□□□ -0.59
CCDC66-219ENST00000484441 PER1O15534 1290 aaPredicted RBP11.35□□□□□ -0.59
CCDC66-219ENST00000484441 ZBTB24O43167 697 aaPredicted RBP11.35□□□□□ -0.59
CCDC66-219ENST00000484441 KCNH2Q12809 1159 aa11.35□□□□□ -0.59
CCDC66-219ENST00000484441 PTCRAQ6ISU1 281 aaPredicted RBP11.35□□□□□ -0.59
CCDC66-219ENST00000484441 CD2BP2O95400 341 aaKnown RBP11.34□□□□□ -0.59
CCDC66-219ENST00000484441 PRR20EP86478 221 aa11.34□□□□□ -0.59
CCDC66-219ENST00000484441 PRR20CP86479 221 aa11.34□□□□□ -0.59
CCDC66-219ENST00000484441 PRR20DP86480 221 aa11.34□□□□□ -0.59
CCDC66-219ENST00000484441 PRR20BP86481 221 aa11.34□□□□□ -0.59
CCDC66-219ENST00000484441 PRR20AP86496 221 aa11.34□□□□□ -0.59
CCDC66-219ENST00000484441 GDF9O60383 454 aa11.33□□□□□ -0.6
CCDC66-219ENST00000484441 IRX2Q9BZI1 471 aaPredicted RBP11.33□□□□□ -0.6
CCDC66-219ENST00000484441 RFC5P40937 340 aa11.31□□□□□ -0.6
CCDC66-219ENST00000484441 UNC93B1Q9H1C4 597 aa11.31□□□□□ -0.6
CCDC66-219ENST00000484441 PKD2L1Q9P0L9 805 aa11.31□□□□□ -0.6
CCDC66-219ENST00000484441 WNT7BP56706 349 aa11.3□□□□□ -0.6
CCDC66-219ENST00000484441 CTDSPL2Q05D32 466 aa11.3□□□□□ -0.6
CCDC66-219ENST00000484441 LAPTM4AQ15012 233 aa11.3□□□□□ -0.6
CCDC66-219ENST00000484441 TSC1Q92574 1164 aa11.3□□□□□ -0.6
CCDC66-219ENST00000484441 MAP10Q9P2G4 905 aa11.3□□□□□ -0.6
CCDC66-219ENST00000484441 SKOR1P84550 965 aa11.29□□□□□ -0.6
CCDC66-219ENST00000484441 PDZRN3Q9UPQ7 1066 aa11.28□□□□□ -0.6
CCDC66-219ENST00000484441 WNT7AO00755 349 aa11.27□□□□□ -0.61
CCDC66-219ENST00000484441 NRG2O14511 850 aaPredicted RBP11.27□□□□□ -0.61
CCDC66-219ENST00000484441 GFRA3O60609 400 aa11.25□□□□□ -0.61
CCDC66-219ENST00000484441 CTHP32929 405 aa11.25□□□□□ -0.61
CCDC66-219ENST00000484441 ATP1B4Q9UN42 357 aaPredicted RBP11.25□□□□□ -0.61
CCDC66-219ENST00000484441 USP17L8P0C7I0 530 aa11.24□□□□□ -0.61
CCDC66-219ENST00000484441 SH3BP2P78314 561 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms