RNA–Protein interactions for RNA: ENST00000484275.1

SCAF11-207, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-207ENST00000484275 Q3C1V9 767 aa11.77□□□□□ -0.53
SCAF11-207ENST00000484275 PKD2L1Q9P0L9 805 aa11.77□□□□□ -0.53
SCAF11-207ENST00000484275 USP46P62068 366 aa11.76□□□□□ -0.53
SCAF11-207ENST00000484275 RPIAP49247 311 aa11.75□□□□□ -0.53
SCAF11-207ENST00000484275 MMP16P51512 607 aa11.74□□□□□ -0.53
SCAF11-207ENST00000484275 USB1Q9BQ65 265 aaKnown RBP11.74□□□□□ -0.53
SCAF11-207ENST00000484275 SSTR3P32745 418 aaPredicted RBP11.73□□□□□ -0.53
SCAF11-207ENST00000484275 AMHR2Q16671 573 aa11.73□□□□□ -0.53
SCAF11-207ENST00000484275 SYMPKQ92797 1274 aaKnown RBP11.73□□□□□ -0.53
SCAF11-207ENST00000484275 DXOO77932 396 aaKnown RBP11.71□□□□□ -0.53
SCAF11-207ENST00000484275 FOXC1Q12948 553 aa11.71□□□□□ -0.53
SCAF11-207ENST00000484275 TTLL12Q14166 644 aaPredicted RBP11.7□□□□□ -0.54
SCAF11-207ENST00000484275 NUTM1Q86Y26 1132 aa11.7□□□□□ -0.54
SCAF11-207ENST00000484275 PCDHGC3Q9UN70 934 aa11.7□□□□□ -0.54
SCAF11-207ENST00000484275 CD2BP2O95400 341 aaKnown RBP11.69□□□□□ -0.54
SCAF11-207ENST00000484275 MYT1Q01538 1121 aa11.69□□□□□ -0.54
SCAF11-207ENST00000484275 PKDCCQ504Y2 493 aa11.69□□□□□ -0.54
SCAF11-207ENST00000484275 FAM187AA6NFU0 413 aa11.68□□□□□ -0.54
SCAF11-207ENST00000484275 DGAT1O75907 488 aa11.68□□□□□ -0.54
SCAF11-207ENST00000484275 GIGYF2Q6Y7W6 1299 aaKnown RBP11.68□□□□□ -0.54
SCAF11-207ENST00000484275 SPIRE2Q8WWL2 714 aa11.68□□□□□ -0.54
SCAF11-207ENST00000484275 TRIM66O15016 1216 aa11.66□□□□□ -0.54
SCAF11-207ENST00000484275 FDX1P10109 184 aa11.65□□□□□ -0.54
SCAF11-207ENST00000484275 NDUFV2P19404 249 aa11.65□□□□□ -0.54
SCAF11-207ENST00000484275 PARP9Q8IXQ6 854 aa11.65□□□□□ -0.54
SCAF11-207ENST00000484275 TOR4AQ9NXH8 423 aa11.65□□□□□ -0.54
SCAF11-207ENST00000484275 ZBTB24O43167 697 aaPredicted RBP11.64□□□□□ -0.55
SCAF11-207ENST00000484275 TRIM32Q13049 653 aa11.64□□□□□ -0.55
SCAF11-207ENST00000484275 MOXD2PA6NHM9 499 aa11.63□□□□□ -0.55
SCAF11-207ENST00000484275 JUNDP17535 347 aa11.62□□□□□ -0.55
SCAF11-207ENST00000484275 RETREG3Q86VR2 466 aa11.62□□□□□ -0.55
SCAF11-207ENST00000484275 CCDC24Q8N4L8 307 aa11.62□□□□□ -0.55
SCAF11-207ENST00000484275 BEGAINQ9BUH8 593 aa11.62□□□□□ -0.55
SCAF11-207ENST00000484275 MS4A1P11836 297 aa11.61□□□□□ -0.55
SCAF11-207ENST00000484275 ZNF787Q6DD87 383 aa11.6□□□□□ -0.55
SCAF11-207ENST00000484275 AK7Q96M32 723 aa11.6□□□□□ -0.55
SCAF11-207ENST00000484275 C6orf229H3BNL8 230 aa11.59□□□□□ -0.55
SCAF11-207ENST00000484275 ST8SIA5O15466 376 aa11.59□□□□□ -0.55
SCAF11-207ENST00000484275 POTECB2RU33 542 aa11.58□□□□□ -0.56
SCAF11-207ENST00000484275 CYP4X1Q8N118 509 aa11.58□□□□□ -0.56
SCAF11-207ENST00000484275 AAASQ9NRG9 546 aa11.58□□□□□ -0.56
SCAF11-207ENST00000484275 WNT7AO00755 349 aa11.57□□□□□ -0.56
SCAF11-207ENST00000484275 PTCRAQ6ISU1 281 aaPredicted RBP11.57□□□□□ -0.56
SCAF11-207ENST00000484275 TBC1D2Q9BYX2 928 aa11.57□□□□□ -0.56
SCAF11-207ENST00000484275 SKOR1P84550 965 aa11.56□□□□□ -0.56
SCAF11-207ENST00000484275 MRGPRX2Q96LB1 330 aa11.56□□□□□ -0.56
SCAF11-207ENST00000484275 NUDT12Q9BQG2 462 aa11.55□□□□□ -0.56
SCAF11-207ENST00000484275 AVPP01185 164 aa11.54□□□□□ -0.56
SCAF11-207ENST00000484275 SLC24A3Q9HC58 644 aa11.54□□□□□ -0.56
SCAF11-207ENST00000484275 PDE4DQ08499 809 aa11.53□□□□□ -0.56
SCAF11-207ENST00000484275 DACH1Q9UI36 760 aa11.53□□□□□ -0.56
SCAF11-207ENST00000484275 TTC24A2A3L6 582 aaPredicted RBP11.52□□□□□ -0.57
SCAF11-207ENST00000484275 RSBN1LQ6PCB5 846 aaPredicted RBP11.52□□□□□ -0.57
SCAF11-207ENST00000484275 PCDHB15Q9Y5E8 787 aa11.52□□□□□ -0.57
SCAF11-207ENST00000484275 SMPD1P17405 629 aa11.51□□□□□ -0.57
SCAF11-207ENST00000484275 MTMR2Q13614 643 aa11.51□□□□□ -0.57
SCAF11-207ENST00000484275 RC3H1Q5TC82 1133 aaKnown RBP11.51□□□□□ -0.57
SCAF11-207ENST00000484275 CRIPAKQ8N1N5 446 aa11.51□□□□□ -0.57
SCAF11-207ENST00000484275 SNIP1Q8TAD8 396 aaKnown RBP11.51□□□□□ -0.57
SCAF11-207ENST00000484275 PRR7Q8TB68 274 aa11.51□□□□□ -0.57
SCAF11-207ENST00000484275 J3QL48 77 aa11.5□□□□□ -0.57
SCAF11-207ENST00000484275 WNT7BP56706 349 aa11.49□□□□□ -0.57
SCAF11-207ENST00000484275 SPTLC1O15269 473 aa11.48□□□□□ -0.57
SCAF11-207ENST00000484275 CCNYL3P0C7X3 344 aa11.48□□□□□ -0.57
SCAF11-207ENST00000484275 GJA5P36382 358 aa11.48□□□□□ -0.57
SCAF11-207ENST00000484275 PTPRNQ16849 979 aa11.47□□□□□ -0.57
SCAF11-207ENST00000484275 ZNF775Q96BV0 537 aaPredicted RBP11.47□□□□□ -0.57
SCAF11-207ENST00000484275 CFAP99D6REC4 459 aa11.46□□□□□ -0.57
SCAF11-207ENST00000484275 DIXDC1Q155Q3 683 aa11.46□□□□□ -0.57
SCAF11-207ENST00000484275 EVA1BQ9NVM1 165 aa11.46□□□□□ -0.57
SCAF11-207ENST00000484275 SPDYE5A6NIY4 337 aa11.45□□□□□ -0.58
SCAF11-207ENST00000484275 AXIN1O15169 862 aa11.45□□□□□ -0.58
SCAF11-207ENST00000484275 HRCP23327 699 aa11.45□□□□□ -0.58
SCAF11-207ENST00000484275 SMCPP49901 116 aaPredicted RBP11.45□□□□□ -0.58
SCAF11-207ENST00000484275 DESI1Q6ICB0 168 aa11.45□□□□□ -0.58
SCAF11-207ENST00000484275 RIC3Q7Z5B4 369 aa11.45□□□□□ -0.58
SCAF11-207ENST00000484275 SH3BP2P78314 561 aa11.44□□□□□ -0.58
SCAF11-207ENST00000484275 CTC1Q2NKJ3 1217 aa11.44□□□□□ -0.58
SCAF11-207ENST00000484275 CABLES1Q8TDN4 633 aa11.44□□□□□ -0.58
SCAF11-207ENST00000484275 UNC93B1Q9H1C4 597 aa11.44□□□□□ -0.58
SCAF11-207ENST00000484275 LIMD1Q9UGP4 676 aa11.44□□□□□ -0.58
SCAF11-207ENST00000484275 SIAH2O43255 324 aa11.43□□□□□ -0.58
SCAF11-207ENST00000484275 KCNH2Q12809 1159 aa11.43□□□□□ -0.58
SCAF11-207ENST00000484275 MYSM1Q5VVJ2 828 aa11.43□□□□□ -0.58
SCAF11-207ENST00000484275 HPS1Q92902 700 aa11.43□□□□□ -0.58
SCAF11-207ENST00000484275 CSPP1Q1MSJ5 1256 aa11.41□□□□□ -0.58
SCAF11-207ENST00000484275 ZBTB3Q9H5J0 574 aa11.41□□□□□ -0.58
SCAF11-207ENST00000484275 GMPR2Q9P2T1 348 aaKnown RBP11.41□□□□□ -0.58
SCAF11-207ENST00000484275 QPCTQ16769 361 aa11.4□□□□□ -0.58
SCAF11-207ENST00000484275 LINC01559Q495D7 138 aa11.4□□□□□ -0.58
SCAF11-207ENST00000484275 LYPD8Q6UX82 237 aa11.4□□□□□ -0.58
SCAF11-207ENST00000484275 BAP1Q92560 729 aa11.4□□□□□ -0.58
SCAF11-207ENST00000484275 PRPF38BQ5VTL8 546 aaKnown RBP11.39□□□□□ -0.59
SCAF11-207ENST00000484275 EHBP1Q8NDI1 1231 aa11.39□□□□□ -0.59
SCAF11-207ENST00000484275 ALDH1A1P00352 501 aa11.38□□□□□ -0.59
SCAF11-207ENST00000484275 PER1O15534 1290 aaPredicted RBP11.36□□□□□ -0.59
SCAF11-207ENST00000484275 ZNF511Q8NB15 262 aa11.36□□□□□ -0.59
SCAF11-207ENST00000484275 MAP10Q9P2G4 905 aa11.36□□□□□ -0.59
SCAF11-207ENST00000484275 LILRB3O75022 631 aa11.35□□□□□ -0.59
SCAF11-207ENST00000484275 F12P00748 615 aaPredicted RBP11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms