RNA–Protein interactions for RNA: ENST00000484112.5

CPSF4-213, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-213ENST00000484112 NUTM2FA1L443 756 aa14.86□□□□□ -0.03
CPSF4-213ENST00000484112 FNBP4Q8N3X1 1017 aaPredicted RBP14.86□□□□□ -0.03
CPSF4-213ENST00000484112 FOXO3O43524 673 aa14.85□□□□□ -0.03
CPSF4-213ENST00000484112 STK26Q9P289 416 aa14.85□□□□□ -0.03
CPSF4-213ENST00000484112 FOXD1Q16676 465 aa14.84□□□□□ -0.03
CPSF4-213ENST00000484112 NPHP3Q7Z494 1330 aa14.84□□□□□ -0.03
CPSF4-213ENST00000484112 HRCP23327 699 aa14.83□□□□□ -0.04
CPSF4-213ENST00000484112 RGL3Q3MIN7 710 aa14.83□□□□□ -0.04
CPSF4-213ENST00000484112 LAMC1P11047 1609 aa14.82□□□□□ -0.04
CPSF4-213ENST00000484112 WAPLQ7Z5K2 1190 aa14.82□□□□□ -0.04
CPSF4-213ENST00000484112 ZRANB1Q9UGI0 708 aa14.82□□□□□ -0.04
CPSF4-213ENST00000484112 ATRNO75882 1429 aa14.82□□□□□ -0.04
CPSF4-213ENST00000484112 ADGRF5Q8IZF2 1346 aa14.81□□□□□ -0.04
CPSF4-213ENST00000484112 LRPPRCP42704 1394 aaKnown RBP14.79□□□□□ -0.04
CPSF4-213ENST00000484112 TMEM132EQ6IEE7 984 aa14.79□□□□□ -0.04
CPSF4-213ENST00000484112 PRAG1Q86YV5 1406 aa14.79□□□□□ -0.04
CPSF4-213ENST00000484112 GJD4Q96KN9 370 aaPredicted RBP14.79□□□□□ -0.04
CPSF4-213ENST00000484112 MYOM2P54296 1465 aa14.78□□□□□ -0.04
CPSF4-213ENST00000484112 BCL9LQ86UU0 1499 aa14.78□□□□□ -0.04
CPSF4-213ENST00000484112 PLEKHG5O94827 1062 aa14.78□□□□□ -0.04
CPSF4-213ENST00000484112 PPLO60437 1756 aa14.78□□□□□ -0.04
CPSF4-213ENST00000484112 COL22A1Q8NFW1 1626 aaPredicted RBP14.77□□□□□ -0.04
CPSF4-213ENST00000484112 PXDNQ92626 1479 aa14.77□□□□□ -0.04
CPSF4-213ENST00000484112 CCDC125Q86Z20 511 aa14.77□□□□□ -0.05
CPSF4-213ENST00000484112 RAB3GAP2Q9H2M9 1393 aa14.76□□□□□ -0.05
CPSF4-213ENST00000484112 PLEKHH1Q9ULM0 1364 aa14.76□□□□□ -0.05
CPSF4-213ENST00000484112 HAP1P54257 671 aaPredicted RBP14.76□□□□□ -0.05
CPSF4-213ENST00000484112 CDC42BPGQ6DT37 1551 aa14.76□□□□□ -0.05
CPSF4-213ENST00000484112 UNC5CLQ8IV45 518 aa14.75□□□□□ -0.05
CPSF4-213ENST00000484112 CCDC144AA2RUR9 1427 aa14.75□□□□□ -0.05
CPSF4-213ENST00000484112 KRT28Q7Z3Y7 464 aa14.74□□□□□ -0.05
CPSF4-213ENST00000484112 MPHOSPH9Q99550 1183 aa14.74□□□□□ -0.05
CPSF4-213ENST00000484112 SPATA31A3Q5VYP0 1347 aa14.73□□□□□ -0.05
CPSF4-213ENST00000484112 LMOD2Q6P5Q4 547 aa14.72□□□□□ -0.05
CPSF4-213ENST00000484112 CCDC9Q9Y3X0 531 aaKnown RBP14.72□□□□□ -0.05
CPSF4-213ENST00000484112 ABCC11Q96J66 1382 aa14.72□□□□□ -0.05
CPSF4-213ENST00000484112 ANKRD30BQ9BXX2 1392 aa14.72□□□□□ -0.05
CPSF4-213ENST00000484112 CABLES1Q8TDN4 633 aa14.71□□□□□ -0.05
CPSF4-213ENST00000484112 RALGAPBQ86X10 1494 aa14.7□□□□□ -0.06
CPSF4-213ENST00000484112 MARF1Q9Y4F3 1742 aaKnown RBP14.7□□□□□ -0.06
CPSF4-213ENST00000484112 TECPR2O15040 1411 aa14.7□□□□□ -0.06
CPSF4-213ENST00000484112 PSME1Q06323 249 aa14.7□□□□□ -0.06
CPSF4-213ENST00000484112 SF3B2Q13435 895 aaKnown RBP14.7□□□□□ -0.06
CPSF4-213ENST00000484112 SAFB2Q14151 953 aaKnown RBP eCLIP14.7□□□□□ -0.06
CPSF4-213ENST00000484112 DEFB132Q7Z7B7 95 aa14.7□□□□□ -0.06
CPSF4-213ENST00000484112 PHF8Q9UPP1 1060 aa14.7□□□□□ -0.06
CPSF4-213ENST00000484112 SPATA31E1Q6ZUB1 1445 aa14.69□□□□□ -0.06
CPSF4-213ENST00000484112 YTHDC2Q9H6S0 1430 aaKnown RBP14.69□□□□□ -0.06
CPSF4-213ENST00000484112 SEPT12Q8IYM1 358 aa14.69□□□□□ -0.06
CPSF4-213ENST00000484112 SLIT2O94813 1529 aa14.68□□□□□ -0.06
CPSF4-213ENST00000484112 BLMP54132 1417 aaPredicted RBP14.67□□□□□ -0.06
CPSF4-213ENST00000484112 A0A0G2JS52 829 aa14.67□□□□□ -0.06
CPSF4-213ENST00000484112 MYT1Q01538 1121 aa14.67□□□□□ -0.06
CPSF4-213ENST00000484112 CFAP70Q5T0N1 1121 aa14.67□□□□□ -0.06
CPSF4-213ENST00000484112 GLI3P10071 1580 aa14.67□□□□□ -0.06
CPSF4-213ENST00000484112 PIK3C2GO75747 1445 aa14.66□□□□□ -0.06
CPSF4-213ENST00000484112 VPS72Q15906 364 aa14.66□□□□□ -0.06
CPSF4-213ENST00000484112 PMFBP1Q8TBY8 1022 aa14.66□□□□□ -0.06
CPSF4-213ENST00000484112 SIRT1Q96EB6 747 aa14.66□□□□□ -0.06
CPSF4-213ENST00000484112 C14orf93Q9H972 538 aaKnown RBP14.66□□□□□ -0.06
CPSF4-213ENST00000484112 FMN2Q9NZ56 1722 aa14.66□□□□□ -0.06
CPSF4-213ENST00000484112 DHX57Q6P158 1386 aaKnown RBP14.65□□□□□ -0.06
CPSF4-213ENST00000484112 TRIM26Q12899 539 aaPredicted RBP14.65□□□□□ -0.06
CPSF4-213ENST00000484112 PRAM1Q96QH2 718 aa14.65□□□□□ -0.06
CPSF4-213ENST00000484112 TNS3Q68CZ2 1445 aa14.65□□□□□ -0.06
CPSF4-213ENST00000484112 KIF1AQ12756 1690 aa14.65□□□□□ -0.06
CPSF4-213ENST00000484112 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.64□□□□□ -0.07
CPSF4-213ENST00000484112 USP32Q8NFA0 1604 aa14.64□□□□□ -0.07
CPSF4-213ENST00000484112 KRT27Q7Z3Y8 459 aa14.64□□□□□ -0.07
CPSF4-213ENST00000484112 POGKQ9P215 609 aa14.64□□□□□ -0.07
CPSF4-213ENST00000484112 KNDC1Q76NI1 1749 aa14.63□□□□□ -0.07
CPSF4-213ENST00000484112 FAM83GA6ND36 823 aa14.63□□□□□ -0.07
CPSF4-213ENST00000484112 IFT172Q9UG01 1749 aa14.63□□□□□ -0.07
CPSF4-213ENST00000484112 SBNO1A3KN83 1393 aa14.61□□□□□ -0.07
CPSF4-213ENST00000484112 RGPD8O14715 1765 aaPredicted RBP14.61□□□□□ -0.07
CPSF4-213ENST00000484112 BRWD3Q6RI45 1802 aa14.61□□□□□ -0.07
CPSF4-213ENST00000484112 ARHGEF10O15013 1369 aa14.6□□□□□ -0.07
CPSF4-213ENST00000484112 ONECUT3O60422 494 aaPredicted RBP14.6□□□□□ -0.07
CPSF4-213ENST00000484112 FAM98CQ17RN3 349 aaKnown RBP14.6□□□□□ -0.07
CPSF4-213ENST00000484112 HIRIP3Q9BW71 556 aaPredicted RBP14.6□□□□□ -0.07
CPSF4-213ENST00000484112 NRXN1Q9ULB1 1477 aa14.6□□□□□ -0.07
CPSF4-213ENST00000484112 PSDA5PKW4 1024 aaPredicted RBP14.59□□□□□ -0.07
CPSF4-213ENST00000484112 BTG4Q9NY30 223 aa14.59□□□□□ -0.07
CPSF4-213ENST00000484112 TRAK1Q9UPV9 953 aa14.59□□□□□ -0.07
CPSF4-213ENST00000484112 BAG6P46379 1132 aa14.58□□□□□ -0.08
CPSF4-213ENST00000484112 PLCH1Q4KWH8 1693 aa14.57□□□□□ -0.08
CPSF4-213ENST00000484112 MINK1Q8N4C8 1332 aaPredicted RBP14.57□□□□□ -0.08
CPSF4-213ENST00000484112 PAK3O75914 559 aaPredicted RBP14.56□□□□□ -0.08
CPSF4-213ENST00000484112 FAM182BQ5T319 152 aa14.56□□□□□ -0.08
CPSF4-213ENST00000484112 KDM2AQ9Y2K7 1162 aa14.56□□□□□ -0.08
CPSF4-213ENST00000484112 GPRASP1Q5JY77 1395 aa14.56□□□□□ -0.08
CPSF4-213ENST00000484112 EN1Q05925 392 aaPredicted RBP14.55□□□□□ -0.08
CPSF4-213ENST00000484112 STAC3Q96MF2 364 aa14.55□□□□□ -0.08
CPSF4-213ENST00000484112 ANKARQ7Z5J8 1434 aa14.55□□□□□ -0.08
CPSF4-213ENST00000484112 NWD2Q9ULI1 1742 aa14.55□□□□□ -0.08
CPSF4-213ENST00000484112 EP400Q96L91 3159 aa14.54□□□□□ -0.08
CPSF4-213ENST00000484112 NGDNQ8NEJ9 315 aaKnown RBP14.54□□□□□ -0.08
CPSF4-213ENST00000484112 SRCAPQ6ZRS2 3230 aa14.53□□□□□ -0.08
CPSF4-213ENST00000484112 ABCA3Q99758 1704 aa14.52□□□□□ -0.08
CPSF4-213ENST00000484112 PRR36Q9H6K5 1346 aa14.52□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms