RNA–Protein interactions for RNA: ENST00000484101.5

UFD1-208, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 5

Gene UFD1, Length 751 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-208ENST00000484101 KNSTRNQ9Y448 316 aa13.02□□□□□ -0.33
UFD1-208ENST00000484101 A2ML1A8K2U0 1454 aa13.02□□□□□ -0.33
UFD1-208ENST00000484101 LRRC7Q96NW7 1537 aa13.02□□□□□ -0.33
UFD1-208ENST00000484101 DLC1Q96QB1 1528 aa13.02□□□□□ -0.33
UFD1-208ENST00000484101 STRCP1A6NGW2 1772 aa13.01□□□□□ -0.33
UFD1-208ENST00000484101 KNDC1Q76NI1 1749 aa13□□□□□ -0.33
UFD1-208ENST00000484101 NLRP1Q9C000 1473 aa12.99□□□□□ -0.33
UFD1-208ENST00000484101 FAM9BQ8IZU0 186 aa12.99□□□□□ -0.33
UFD1-208ENST00000484101 PNISRQ8TF01 805 aaKnown RBP12.99□□□□□ -0.33
UFD1-208ENST00000484101 HDGFP51858 240 aaKnown RBP12.98□□□□□ -0.33
UFD1-208ENST00000484101 CCDC184Q52MB2 194 aa12.98□□□□□ -0.33
UFD1-208ENST00000484101 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.98□□□□□ -0.33
UFD1-208ENST00000484101 STAG3Q9UJ98 1225 aa12.98□□□□□ -0.33
UFD1-208ENST00000484101 RIMS2Q9UQ26 1411 aa12.97□□□□□ -0.33
UFD1-208ENST00000484101 UBR1Q8IWV7 1749 aa12.97□□□□□ -0.33
UFD1-208ENST00000484101 EVC2Q86UK5 1308 aa12.97□□□□□ -0.33
UFD1-208ENST00000484101 TNRQ92752 1358 aa12.96□□□□□ -0.33
UFD1-208ENST00000484101 ERICH6BQ5W0A0 696 aa12.96□□□□□ -0.33
UFD1-208ENST00000484101 TULP4Q9NRJ4 1543 aa12.96□□□□□ -0.33
UFD1-208ENST00000484101 BLMP54132 1417 aaPredicted RBP12.96□□□□□ -0.34
UFD1-208ENST00000484101 SMG6Q86US8 1419 aaKnown RBP12.96□□□□□ -0.34
UFD1-208ENST00000484101 YTHDC2Q9H6S0 1430 aaKnown RBP12.96□□□□□ -0.34
UFD1-208ENST00000484101 NSD2O96028 1365 aa12.95□□□□□ -0.34
UFD1-208ENST00000484101 AMER1Q5JTC6 1135 aaPredicted RBP12.95□□□□□ -0.34
UFD1-208ENST00000484101 ATAD2Q6PL18 1390 aa12.94□□□□□ -0.34
UFD1-208ENST00000484101 MED14O60244 1454 aa12.94□□□□□ -0.34
UFD1-208ENST00000484101 SUPT16HQ9Y5B9 1047 aaKnown RBP12.94□□□□□ -0.34
UFD1-208ENST00000484101 NPHP4O75161 1426 aaPredicted RBP12.94□□□□□ -0.34
UFD1-208ENST00000484101 NRXN3Q9Y4C0 1643 aa12.93□□□□□ -0.34
UFD1-208ENST00000484101 ANKLE2Q86XL3 938 aa12.93□□□□□ -0.34
UFD1-208ENST00000484101 TRAK1Q9UPV9 953 aa12.93□□□□□ -0.34
UFD1-208ENST00000484101 FAM135BQ49AJ0 1406 aa12.92□□□□□ -0.34
UFD1-208ENST00000484101 FBXO31Q5XUX0 539 aaPredicted RBP12.92□□□□□ -0.34
UFD1-208ENST00000484101 ANKRD26Q9UPS8 1709 aa12.92□□□□□ -0.34
UFD1-208ENST00000484101 ANKRD36BQ8N2N9 1353 aa12.92□□□□□ -0.34
UFD1-208ENST00000484101 PDE3BQ13370 1112 aa12.91□□□□□ -0.34
UFD1-208ENST00000484101 CC2D1BQ5T0F9 858 aaKnown RBP12.91□□□□□ -0.34
UFD1-208ENST00000484101 TECPR2O15040 1411 aa12.9□□□□□ -0.34
UFD1-208ENST00000484101 DIP2AQ14689 1571 aa12.9□□□□□ -0.35
UFD1-208ENST00000484101 TMEM132EQ6IEE7 984 aa12.89□□□□□ -0.35
UFD1-208ENST00000484101 XIRP1Q702N8 1843 aaKnown RBP12.89□□□□□ -0.35
UFD1-208ENST00000484101 ABCC11Q96J66 1382 aa12.89□□□□□ -0.35
UFD1-208ENST00000484101 CGNL1Q0VF96 1302 aa12.88□□□□□ -0.35
UFD1-208ENST00000484101 NSD3Q9BZ95 1437 aa12.88□□□□□ -0.35
UFD1-208ENST00000484101 PPP2R1AP30153 589 aa12.88□□□□□ -0.35
UFD1-208ENST00000484101 SIRT1Q96EB6 747 aa12.88□□□□□ -0.35
UFD1-208ENST00000484101 NUDCQ9Y266 331 aa12.88□□□□□ -0.35
UFD1-208ENST00000484101 TMEM2Q9UHN6 1383 aa12.88□□□□□ -0.35
UFD1-208ENST00000484101 SLIT1O75093 1534 aa12.88□□□□□ -0.35
UFD1-208ENST00000484101 NGEFQ8N5V2 710 aa12.87□□□□□ -0.35
UFD1-208ENST00000484101 ATP7BP35670 1465 aa12.86□□□□□ -0.35
UFD1-208ENST00000484101 ADGRB2O60241 1585 aa12.86□□□□□ -0.35
UFD1-208ENST00000484101 KIF20BQ96Q89 1820 aa12.85□□□□□ -0.35
UFD1-208ENST00000484101 ARHGAP23Q9P227 1491 aa12.85□□□□□ -0.35
UFD1-208ENST00000484101 POLR3AO14802 1390 aaPredicted RBP12.85□□□□□ -0.35
UFD1-208ENST00000484101 PLEKHG1Q9ULL1 1385 aa12.85□□□□□ -0.35
UFD1-208ENST00000484101 CNGB1Q14028 1251 aaPredicted RBP12.85□□□□□ -0.35
UFD1-208ENST00000484101 FKBP8Q14318 412 aa12.85□□□□□ -0.35
UFD1-208ENST00000484101 WDR43Q15061 677 aaKnown RBP eCLIP12.85□□□□□ -0.35
UFD1-208ENST00000484101 POGKQ9P215 609 aa12.85□□□□□ -0.35
UFD1-208ENST00000484101 ROBO1Q9Y6N7 1651 aa12.85□□□□□ -0.35
UFD1-208ENST00000484101 THEMISQ8N1K5 641 aaPredicted RBP12.84□□□□□ -0.35
UFD1-208ENST00000484101 TERF2IPQ9NYB0 399 aa12.84□□□□□ -0.35
UFD1-208ENST00000484101 NUTM2DQ5VT03 806 aaPredicted RBP12.83□□□□□ -0.36
UFD1-208ENST00000484101 ZNF772Q68DY9 489 aaPredicted RBP12.83□□□□□ -0.36
UFD1-208ENST00000484101 PRAM1Q96QH2 718 aa12.82□□□□□ -0.36
UFD1-208ENST00000484101 CARD14Q9BXL6 1004 aa12.82□□□□□ -0.36
UFD1-208ENST00000484101 CDK12Q9NYV4 1490 aaPredicted RBP12.81□□□□□ -0.36
UFD1-208ENST00000484101 JCADQ9P266 1359 aa12.81□□□□□ -0.36
UFD1-208ENST00000484101 LRP6O75581 1613 aa12.8□□□□□ -0.36
UFD1-208ENST00000484101 SHPRHQ149N8 1683 aa12.8□□□□□ -0.36
UFD1-208ENST00000484101 ITSN1Q15811 1721 aa12.8□□□□□ -0.36
UFD1-208ENST00000484101 RXRBP28702 533 aa12.8□□□□□ -0.36
UFD1-208ENST00000484101 SRPK2P78362 688 aaKnown RBP12.8□□□□□ -0.36
UFD1-208ENST00000484101 STK26Q9P289 416 aa12.8□□□□□ -0.36
UFD1-208ENST00000484101 RNF123Q5XPI4 1314 aa12.8□□□□□ -0.36
UFD1-208ENST00000484101 HDGFL2Q7Z4V5 671 aaPredicted RBP12.79□□□□□ -0.36
UFD1-208ENST00000484101 MORC1Q86VD1 984 aa12.79□□□□□ -0.36
UFD1-208ENST00000484101 CFAP53Q96M91 514 aa12.79□□□□□ -0.36
UFD1-208ENST00000484101 SLC12A5Q9H2X9 1139 aa12.79□□□□□ -0.36
UFD1-208ENST00000484101 EID1Q9Y6B2 187 aa12.79□□□□□ -0.36
UFD1-208ENST00000484101 A0A1W2PP64 1363 aa12.79□□□□□ -0.36
UFD1-208ENST00000484101 MON2Q7Z3U7 1717 aa12.79□□□□□ -0.36
UFD1-208ENST00000484101 AKAP12Q02952 1782 aa12.79□□□□□ -0.36
UFD1-208ENST00000484101 PHLPP1O60346 1717 aa12.78□□□□□ -0.36
UFD1-208ENST00000484101 PTCH1Q13635 1447 aa12.78□□□□□ -0.36
UFD1-208ENST00000484101 ADAMTS13Q76LX8 1427 aa12.78□□□□□ -0.36
UFD1-208ENST00000484101 CDC42BPGQ6DT37 1551 aa12.77□□□□□ -0.36
UFD1-208ENST00000484101 NCBP3Q53F19 620 aaKnown RBP12.77□□□□□ -0.37
UFD1-208ENST00000484101 CD163L1Q9NR16 1453 aa12.77□□□□□ -0.37
UFD1-208ENST00000484101 TOPAZ1Q8N9V7 1692 aa12.77□□□□□ -0.37
UFD1-208ENST00000484101 CABP2Q9NPB3 220 aa12.76□□□□□ -0.37
UFD1-208ENST00000484101 ZRANB1Q9UGI0 708 aa12.76□□□□□ -0.37
UFD1-208ENST00000484101 MINK1Q8N4C8 1332 aaPredicted RBP12.76□□□□□ -0.37
UFD1-208ENST00000484101 METP08581 1390 aa12.76□□□□□ -0.37
UFD1-208ENST00000484101 PIK3R4Q99570 1358 aa12.76□□□□□ -0.37
UFD1-208ENST00000484101 EDC4Q6P2E9 1401 aaKnown RBP12.75□□□□□ -0.37
UFD1-208ENST00000484101 XRN1Q8IZH2 1706 aaKnown RBP12.74□□□□□ -0.37
UFD1-208ENST00000484101 MEX3CQ5U5Q3 659 aaKnown RBP12.74□□□□□ -0.37
UFD1-208ENST00000484101 CDK19Q9BWU1 502 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms