RNA–Protein interactions for RNA: ENST00000483962.1

SNED1-210, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

TSL 2

Gene SNED1, Length 938 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-210ENST00000483962 SAFB2Q14151 953 aaKnown RBP eCLIP27.76■■■□□ 2.03
SNED1-210ENST00000483962 FBXO41Q8TF61 875 aa27.76■■■□□ 2.03
SNED1-210ENST00000483962 POGKQ9P215 609 aa27.76■■■□□ 2.03
SNED1-210ENST00000483962 DCCP43146 1447 aa27.74■■■□□ 2.03
SNED1-210ENST00000483962 ATF3P18847 181 aa27.72■■■□□ 2.03
SNED1-210ENST00000483962 CARD11Q9BXL7 1154 aa27.72■■■□□ 2.03
SNED1-210ENST00000483962 CADPS2Q86UW7 1296 aa27.71■■■□□ 2.03
SNED1-210ENST00000483962 CDC42BPGQ6DT37 1551 aa27.69■■■□□ 2.02
SNED1-210ENST00000483962 PIP4K2BP78356 416 aa27.69■■■□□ 2.02
SNED1-210ENST00000483962 SLAIN2Q9P270 581 aa27.68■■■□□ 2.02
SNED1-210ENST00000483962 MINK1Q8N4C8 1332 aaPredicted RBP27.67■■■□□ 2.02
SNED1-210ENST00000483962 ADGRB2O60241 1585 aa27.66■■■□□ 2.02
SNED1-210ENST00000483962 MST1RQ04912 1400 aa27.66■■■□□ 2.02
SNED1-210ENST00000483962 HIRIP3Q9BW71 556 aaPredicted RBP27.65■■■□□ 2.02
SNED1-210ENST00000483962 QRICH2Q9H0J4 1663 aa27.65■■■□□ 2.02
SNED1-210ENST00000483962 CENPJQ9HC77 1338 aaPredicted RBP27.65■■■□□ 2.02
SNED1-210ENST00000483962 SCAF1Q9H7N4 1312 aaKnown RBP27.64■■■□□ 2.01
SNED1-210ENST00000483962 FMN2Q9NZ56 1722 aa27.64■■■□□ 2.01
SNED1-210ENST00000483962 ROBO1Q9Y6N7 1651 aa27.61■■■□□ 2.01
SNED1-210ENST00000483962 EIF3AQ14152 1382 aaKnown RBP27.6■■■□□ 2.01
SNED1-210ENST00000483962 ILDR1Q86SU0 546 aaPredicted RBP27.6■■■□□ 2.01
SNED1-210ENST00000483962 C1orf167Q5SNV9 1468 aa27.59■■■□□ 2.01
SNED1-210ENST00000483962 NUTM2FA1L443 756 aa27.58■■■□□ 2.01
SNED1-210ENST00000483962 RGPD8O14715 1765 aaPredicted RBP27.57■■■□□ 2
SNED1-210ENST00000483962 WASLO00401 505 aaPredicted RBP27.56■■■□□ 2
SNED1-210ENST00000483962 BRINP3Q76B58 766 aa27.54■■■□□ 2
SNED1-210ENST00000483962 USP32Q8NFA0 1604 aa27.54■■■□□ 2
SNED1-210ENST00000483962 USP47Q96K76 1375 aa27.54■■■□□ 2
SNED1-210ENST00000483962 ORAI2Q96SN7 254 aa27.52■■■□□ 2
SNED1-210ENST00000483962 TULP4Q9NRJ4 1543 aa27.51■■■□□ 2
SNED1-210ENST00000483962 ST20-MTHFSA0A0A6YYL1 179 aa27.51■■□□□ 1.99
SNED1-210ENST00000483962 CDK19Q9BWU1 502 aa27.51■■□□□ 1.99
SNED1-210ENST00000483962 PRR36Q9H6K5 1346 aa27.5■■□□□ 1.99
SNED1-210ENST00000483962 SBNO2Q9Y2G9 1366 aa27.49■■□□□ 1.99
SNED1-210ENST00000483962 ANKARQ7Z5J8 1434 aa27.49■■□□□ 1.99
SNED1-210ENST00000483962 ESCO1Q5FWF5 840 aa27.48■■□□□ 1.99
SNED1-210ENST00000483962 HSPA1LP34931 641 aa27.47■■□□□ 1.99
SNED1-210ENST00000483962 TESK2Q96S53 571 aa27.46■■□□□ 1.99
SNED1-210ENST00000483962 ATP7BP35670 1465 aa27.45■■□□□ 1.99
SNED1-210ENST00000483962 NHSL1Q5SYE7 1610 aa27.45■■□□□ 1.98
SNED1-210ENST00000483962 EVC2Q86UK5 1308 aa27.44■■□□□ 1.98
SNED1-210ENST00000483962 NUDT16Q96DE0 195 aaKnown RBP27.44■■□□□ 1.98
SNED1-210ENST00000483962 AHDC1Q5TGY3 1603 aaPredicted RBP27.44■■□□□ 1.98
SNED1-210ENST00000483962 DDX17Q92841 729 aaKnown RBP27.43■■□□□ 1.98
SNED1-210ENST00000483962 CABP2Q9NPB3 220 aa27.43■■□□□ 1.98
SNED1-210ENST00000483962 PHLPP1O60346 1717 aa27.43■■□□□ 1.98
SNED1-210ENST00000483962 SRPK2P78362 688 aaKnown RBP27.42■■□□□ 1.98
SNED1-210ENST00000483962 KIF1AQ12756 1690 aa27.41■■□□□ 1.98
SNED1-210ENST00000483962 ITSN1Q15811 1721 aa27.41■■□□□ 1.98
SNED1-210ENST00000483962 TOPAZ1Q8N9V7 1692 aa27.4■■□□□ 1.98
SNED1-210ENST00000483962 PHF8Q9UPP1 1060 aa27.4■■□□□ 1.98
SNED1-210ENST00000483962 EIF4G2P78344 907 aaKnown RBP eCLIP27.39■■□□□ 1.98
SNED1-210ENST00000483962 COL16A1Q07092 1604 aaPredicted RBP27.38■■□□□ 1.97
SNED1-210ENST00000483962 HSPA5P11021 654 aaKnown RBP27.38■■□□□ 1.97
SNED1-210ENST00000483962 PMFBP1Q8TBY8 1022 aa27.37■■□□□ 1.97
SNED1-210ENST00000483962 FOXO3O43524 673 aa27.36■■□□□ 1.97
SNED1-210ENST00000483962 CCDC61Q9Y6R9 512 aa27.36■■□□□ 1.97
SNED1-210ENST00000483962 DISP3Q9P2K9 1392 aa27.34■■□□□ 1.97
SNED1-210ENST00000483962 NPHP3Q7Z494 1330 aa27.33■■□□□ 1.97
SNED1-210ENST00000483962 SLC24A1O60721 1099 aa27.32■■□□□ 1.96
SNED1-210ENST00000483962 SOS2Q07890 1332 aaPredicted RBP27.32■■□□□ 1.96
SNED1-210ENST00000483962 PPIP5K1Q6PFW1 1433 aa27.32■■□□□ 1.96
SNED1-210ENST00000483962 PXDNQ92626 1479 aa27.32■■□□□ 1.96
SNED1-210ENST00000483962 XPCQ01831 940 aaPredicted RBP27.31■■□□□ 1.96
SNED1-210ENST00000483962 PLEKHG3A1L390 1219 aa27.3■■□□□ 1.96
SNED1-210ENST00000483962 TMF1P82094 1093 aa27.3■■□□□ 1.96
SNED1-210ENST00000483962 ATAD2Q6PL18 1390 aa27.29■■□□□ 1.96
SNED1-210ENST00000483962 NGDNQ8NEJ9 315 aaKnown RBP27.28■■□□□ 1.96
SNED1-210ENST00000483962 PUS7Q96PZ0 661 aaKnown RBP27.28■■□□□ 1.96
SNED1-210ENST00000483962 CABP1Q9NZU7 370 aa27.28■■□□□ 1.96
SNED1-210ENST00000483962 ACEP12821 1306 aa27.27■■□□□ 1.96
SNED1-210ENST00000483962 KRT28Q7Z3Y7 464 aa27.27■■□□□ 1.96
SNED1-210ENST00000483962 POLR3AO14802 1390 aaPredicted RBP27.26■■□□□ 1.95
SNED1-210ENST00000483962 ZEB1P37275 1124 aaPredicted RBP27.25■■□□□ 1.95
SNED1-210ENST00000483962 PSME1Q06323 249 aa27.25■■□□□ 1.95
SNED1-210ENST00000483962 LRRC59Q96AG4 307 aaKnown RBP27.23■■□□□ 1.95
SNED1-210ENST00000483962 TRPM3Q9HCF6 1732 aaPredicted RBP27.23■■□□□ 1.95
SNED1-210ENST00000483962 SHPRHQ149N8 1683 aa27.21■■□□□ 1.95
SNED1-210ENST00000483962 JCADQ9P266 1359 aa27.21■■□□□ 1.95
SNED1-210ENST00000483962 AKAP12Q02952 1782 aa27.2■■□□□ 1.94
SNED1-210ENST00000483962 CDCA8Q53HL2 280 aa27.19■■□□□ 1.94
SNED1-210ENST00000483962 TMC1Q8TDI8 760 aa27.19■■□□□ 1.94
SNED1-210ENST00000483962 SLC12A5Q9H2X9 1139 aa27.19■■□□□ 1.94
SNED1-210ENST00000483962 C11orf95C9JLR9 678 aaPredicted RBP27.18■■□□□ 1.94
SNED1-210ENST00000483962 SBNO1A3KN83 1393 aa27.18■■□□□ 1.94
SNED1-210ENST00000483962 SPATA31A3Q5VYP0 1347 aa27.17■■□□□ 1.94
SNED1-210ENST00000483962 PNPLA6Q8IY17 1366 aa27.17■■□□□ 1.94
SNED1-210ENST00000483962 CD163L1Q9NR16 1453 aa27.17■■□□□ 1.94
SNED1-210ENST00000483962 CPSF1Q10570 1443 aaKnown RBP27.16■■□□□ 1.94
SNED1-210ENST00000483962 TNS3Q68CZ2 1445 aa27.16■■□□□ 1.94
SNED1-210ENST00000483962 MYOM1P52179 1685 aa27.15■■□□□ 1.94
SNED1-210ENST00000483962 ALS2Q96Q42 1657 aa27.15■■□□□ 1.94
SNED1-210ENST00000483962 USP6P35125 1406 aa27.14■■□□□ 1.93
SNED1-210ENST00000483962 MON2Q7Z3U7 1717 aa27.13■■□□□ 1.93
SNED1-210ENST00000483962 COL22A1Q8NFW1 1626 aaPredicted RBP27.12■■□□□ 1.93
SNED1-210ENST00000483962 NINLQ9Y2I6 1382 aa27.12■■□□□ 1.93
SNED1-210ENST00000483962 ZNF692Q9BU19 519 aaPredicted RBP27.12■■□□□ 1.93
SNED1-210ENST00000483962 PAK3O75914 559 aaPredicted RBP27.11■■□□□ 1.93
SNED1-210ENST00000483962 SSH2Q76I76 1423 aa27.1■■□□□ 1.93
SNED1-210ENST00000483962 POLR3GLQ9BT43 218 aa27.1■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms