RNA–Protein interactions for RNA: ENST00000483888.6

COL12A1-207, Transcript of collagen type XII alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL12A1, Length 9,637 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-207ENST00000483888 TTC31Q49AM3 519 aaPredicted RBP12.26□□□□□ -0.45
COL12A1-207ENST00000483888 GBP2P32456 591 aaPredicted RBP12.26□□□□□ -0.45
COL12A1-207ENST00000483888 DHX8Q14562 1220 aaKnown RBP12.26□□□□□ -0.45
COL12A1-207ENST00000483888 CPSF2Q9P2I0 782 aaKnown RBP12.26□□□□□ -0.45
COL12A1-207ENST00000483888 SMARCE1Q969G3 411 aa12.26□□□□□ -0.45
COL12A1-207ENST00000483888 PPP1R15AO75807 674 aaPredicted RBP12.25□□□□□ -0.45
COL12A1-207ENST00000483888 LMAN1P49257 510 aa12.25□□□□□ -0.45
COL12A1-207ENST00000483888 ZKSCAN2Q63HK3 967 aa12.25□□□□□ -0.45
COL12A1-207ENST00000483888 RNF187Q5TA31 235 aaPredicted RBP12.25□□□□□ -0.45
COL12A1-207ENST00000483888 MICALCLQ6ZW33 695 aa12.25□□□□□ -0.45
COL12A1-207ENST00000483888 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.25□□□□□ -0.45
COL12A1-207ENST00000483888 STK31Q9BXU1 1019 aa12.25□□□□□ -0.45
COL12A1-207ENST00000483888 KRT222Q8N1A0 295 aa12.24□□□□□ -0.45
COL12A1-207ENST00000483888 SDF4Q9BRK5 362 aa12.24□□□□□ -0.45
COL12A1-207ENST00000483888 PRKRIP1Q9H875 184 aaPredicted RBP12.24□□□□□ -0.45
COL12A1-207ENST00000483888 ERLIN2O94905 339 aa12.24□□□□□ -0.45
COL12A1-207ENST00000483888 PLPPR3Q6T4P5 718 aa12.24□□□□□ -0.45
COL12A1-207ENST00000483888 GOLGA6L10A0A0M3HER8 536 aa12.24□□□□□ -0.45
COL12A1-207ENST00000483888 HSP90AB2PQ58FF8 381 aa12.24□□□□□ -0.45
COL12A1-207ENST00000483888 FOSBP53539 338 aa12.23□□□□□ -0.45
COL12A1-207ENST00000483888 PTPN14Q15678 1187 aa12.23□□□□□ -0.45
COL12A1-207ENST00000483888 ZKSCAN1P17029 563 aaPredicted RBP12.23□□□□□ -0.45
COL12A1-207ENST00000483888 EIF3AQ14152 1382 aaKnown RBP12.23□□□□□ -0.45
COL12A1-207ENST00000483888 KINO60870 393 aaKnown RBP12.23□□□□□ -0.45
COL12A1-207ENST00000483888 KIF18AQ8NI77 898 aa12.23□□□□□ -0.45
COL12A1-207ENST00000483888 PAIP2Q9BPZ3 127 aaKnown RBP12.23□□□□□ -0.45
COL12A1-207ENST00000483888 TRIM29Q14134 588 aa12.23□□□□□ -0.45
COL12A1-207ENST00000483888 CRACR2AQ9BSW2 395 aa12.23□□□□□ -0.45
COL12A1-207ENST00000483888 KIAA1328Q86T90 577 aa12.22□□□□□ -0.45
COL12A1-207ENST00000483888 FMNL2Q96PY5 1086 aa12.22□□□□□ -0.45
COL12A1-207ENST00000483888 TAX1BP1Q86VP1 789 aa12.22□□□□□ -0.45
COL12A1-207ENST00000483888 PRIMPOLQ96LW4 560 aa12.22□□□□□ -0.45
COL12A1-207ENST00000483888 SYCE3A1L190 88 aa12.22□□□□□ -0.45
COL12A1-207ENST00000483888 CCAR1Q8IX12 1150 aaKnown RBP12.22□□□□□ -0.45
COL12A1-207ENST00000483888 KIF7Q2M1P5 1343 aa12.21□□□□□ -0.45
COL12A1-207ENST00000483888 DDX19BQ9UMR2 479 aa12.21□□□□□ -0.45
COL12A1-207ENST00000483888 FILIP1Q7Z7B0 1213 aa12.21□□□□□ -0.45
COL12A1-207ENST00000483888 TMCO5BA8MYB1 307 aa12.21□□□□□ -0.45
COL12A1-207ENST00000483888 RABEP1Q15276 862 aa12.21□□□□□ -0.45
COL12A1-207ENST00000483888 IQCEQ6IPM2 695 aa12.21□□□□□ -0.45
COL12A1-207ENST00000483888 RUFY2Q8WXA3 655 aa12.21□□□□□ -0.45
COL12A1-207ENST00000483888 IVLP07476 585 aa12.21□□□□□ -0.46
COL12A1-207ENST00000483888 LUZP1Q86V48 1076 aa12.21□□□□□ -0.46
COL12A1-207ENST00000483888 AKNAQ7Z591 1439 aa12.21□□□□□ -0.46
COL12A1-207ENST00000483888 KIF2AO00139 706 aaPredicted RBP12.21□□□□□ -0.46
COL12A1-207ENST00000483888 FIBPO43427 364 aa12.21□□□□□ -0.46
COL12A1-207ENST00000483888 CCDC47Q96A33 483 aaKnown RBP12.21□□□□□ -0.46
COL12A1-207ENST00000483888 GBP3Q9H0R5 595 aa12.2□□□□□ -0.46
COL12A1-207ENST00000483888 CFAP45Q9UL16 551 aa12.2□□□□□ -0.46
COL12A1-207ENST00000483888 TNMDQ9H2S6 317 aa12.2□□□□□ -0.46
COL12A1-207ENST00000483888 MCM5P33992 734 aa12.2□□□□□ -0.46
COL12A1-207ENST00000483888 AKAP17AQ02040 695 aaKnown RBP12.2□□□□□ -0.46
COL12A1-207ENST00000483888 MARCH6O60337 910 aa12.2□□□□□ -0.46
COL12A1-207ENST00000483888 SEPT7Q16181 437 aaKnown RBP12.2□□□□□ -0.46
COL12A1-207ENST00000483888 CCDC181Q5TID7 509 aa12.2□□□□□ -0.46
COL12A1-207ENST00000483888 CWC22Q9HCG8 908 aaKnown RBP12.2□□□□□ -0.46
COL12A1-207ENST00000483888 RASSF4Q9H2L5 321 aa12.2□□□□□ -0.46
COL12A1-207ENST00000483888 SLC26A8Q96RN1 970 aa12.2□□□□□ -0.46
COL12A1-207ENST00000483888 KIF20AO95235 890 aa12.2□□□□□ -0.46
COL12A1-207ENST00000483888 MAP9Q49MG5 647 aa12.2□□□□□ -0.46
COL12A1-207ENST00000483888 LNPKQ9C0E8 428 aa12.2□□□□□ -0.46
COL12A1-207ENST00000483888 CCDC9Q9Y3X0 531 aaKnown RBP12.2□□□□□ -0.46
COL12A1-207ENST00000483888 SERPINC1P01008 464 aa12.19□□□□□ -0.46
COL12A1-207ENST00000483888 C10orf67Q8IYJ2 551 aa12.19□□□□□ -0.46
COL12A1-207ENST00000483888 BMS1Q14692 1282 aaKnown RBP12.19□□□□□ -0.46
COL12A1-207ENST00000483888 FOXD1Q16676 465 aa12.19□□□□□ -0.46
COL12A1-207ENST00000483888 LRRFIP2Q9Y608 721 aaKnown RBP12.19□□□□□ -0.46
COL12A1-207ENST00000483888 C16orf45Q96MC5 204 aaPredicted RBP12.19□□□□□ -0.46
COL12A1-207ENST00000483888 RRP7AQ9Y3A4 280 aaKnown RBP12.19□□□□□ -0.46
COL12A1-207ENST00000483888 SYNE3Q6ZMZ3 975 aa12.19□□□□□ -0.46
COL12A1-207ENST00000483888 MPHOSPH10O00566 681 aaKnown RBP12.18□□□□□ -0.46
COL12A1-207ENST00000483888 MAP2K1Q02750 393 aaPredicted RBP12.18□□□□□ -0.46
COL12A1-207ENST00000483888 FILIP1LQ4L180 1135 aa12.18□□□□□ -0.46
COL12A1-207ENST00000483888 K7ELQ4 463 aaPredicted RBP12.18□□□□□ -0.46
COL12A1-207ENST00000483888 RBM28Q9NW13 759 aaKnown RBP12.18□□□□□ -0.46
COL12A1-207ENST00000483888 BRD2P25440 801 aaKnown RBP12.18□□□□□ -0.46
COL12A1-207ENST00000483888 BRPF1P55201 1214 aaPredicted RBP12.18□□□□□ -0.46
COL12A1-207ENST00000483888 C11orf95C9JLR9 678 aaPredicted RBP12.18□□□□□ -0.46
COL12A1-207ENST00000483888 CASQ1P31415 396 aa12.18□□□□□ -0.46
COL12A1-207ENST00000483888 ARHGAP35Q9NRY4 1499 aa12.17□□□□□ -0.46
COL12A1-207ENST00000483888 CDC45O75419 566 aa12.17□□□□□ -0.46
COL12A1-207ENST00000483888 EZRP15311 586 aaKnown RBP12.17□□□□□ -0.46
COL12A1-207ENST00000483888 JAKMIP3Q5VZ66 844 aa12.17□□□□□ -0.46
COL12A1-207ENST00000483888 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.17□□□□□ -0.46
COL12A1-207ENST00000483888 IGSF3O75054 1194 aa12.17□□□□□ -0.46
COL12A1-207ENST00000483888 BANK1Q8NDB2 785 aa12.17□□□□□ -0.46
COL12A1-207ENST00000483888 CPLX1O14810 134 aa12.16□□□□□ -0.46
COL12A1-207ENST00000483888 MICALL1Q8N3F8 863 aa12.16□□□□□ -0.46
COL12A1-207ENST00000483888 EPS15P42566 896 aa12.16□□□□□ -0.46
COL12A1-207ENST00000483888 SPAG9O60271 1321 aaKnown RBP12.16□□□□□ -0.46
COL12A1-207ENST00000483888 CPLX2Q6PUV4 134 aaKnown RBP12.16□□□□□ -0.46
COL12A1-207ENST00000483888 CIZ1Q9ULV3 898 aaPredicted RBP12.16□□□□□ -0.46
COL12A1-207ENST00000483888 GBP6Q6ZN66 633 aa12.16□□□□□ -0.46
COL12A1-207ENST00000483888 PABPN1Q86U42 306 aaKnown RBP eCLIP12.16□□□□□ -0.46
COL12A1-207ENST00000483888 MCM2P49736 904 aa12.16□□□□□ -0.46
COL12A1-207ENST00000483888 VPS53Q5VIR6 699 aa12.16□□□□□ -0.46
COL12A1-207ENST00000483888 SPATA24Q86W54 205 aa12.16□□□□□ -0.46
COL12A1-207ENST00000483888 ANKRD62A6NC57 917 aa12.16□□□□□ -0.46
COL12A1-207ENST00000483888 PPFIBP1Q86W92 1011 aa12.16□□□□□ -0.46
COL12A1-207ENST00000483888 DZIP1LQ8IYY4 767 aaKnown RBP12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms