RNA–Protein interactions for RNA: ENST00000483882.1

NR1H3-222, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 2

Gene NR1H3, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-222ENST00000483882 STK26Q9P289 416 aa21.77■■□□□ 1.08
NR1H3-222ENST00000483882 SPATA31E1Q6ZUB1 1445 aa21.77■■□□□ 1.08
NR1H3-222ENST00000483882 ADAMTS2O95450 1211 aa21.76■■□□□ 1.07
NR1H3-222ENST00000483882 SOS2Q07890 1332 aaPredicted RBP21.75■■□□□ 1.07
NR1H3-222ENST00000483882 LAMC1P11047 1609 aa21.73■■□□□ 1.07
NR1H3-222ENST00000483882 ESCO1Q5FWF5 840 aa21.73■■□□□ 1.07
NR1H3-222ENST00000483882 SIN3AQ96ST3 1273 aa21.73■■□□□ 1.07
NR1H3-222ENST00000483882 TMEM132EQ6IEE7 984 aa21.72■■□□□ 1.07
NR1H3-222ENST00000483882 WAPLQ7Z5K2 1190 aa21.72■■□□□ 1.07
NR1H3-222ENST00000483882 UPF1Q92900 1129 aaKnown RBP eCLIP21.72■■□□□ 1.07
NR1H3-222ENST00000483882 NGLY1Q96IV0 654 aa21.72■■□□□ 1.07
NR1H3-222ENST00000483882 QTRT2Q9H974 415 aaKnown RBP21.72■■□□□ 1.07
NR1H3-222ENST00000483882 CDC42BPGQ6DT37 1551 aa21.72■■□□□ 1.07
NR1H3-222ENST00000483882 LRPPRCP42704 1394 aaKnown RBP21.72■■□□□ 1.07
NR1H3-222ENST00000483882 IFT172Q9UG01 1749 aa21.71■■□□□ 1.07
NR1H3-222ENST00000483882 CDK12Q9NYV4 1490 aaPredicted RBP21.71■■□□□ 1.07
NR1H3-222ENST00000483882 NUTM2FA1L443 756 aa21.7■■□□□ 1.06
NR1H3-222ENST00000483882 NPHP3Q7Z494 1330 aa21.69■■□□□ 1.06
NR1H3-222ENST00000483882 TECPR2O15040 1411 aa21.69■■□□□ 1.06
NR1H3-222ENST00000483882 PIK3C2GO75747 1445 aa21.69■■□□□ 1.06
NR1H3-222ENST00000483882 RBM6P78332 1123 aaKnown RBP21.68■■□□□ 1.06
NR1H3-222ENST00000483882 PLEKHH1Q9ULM0 1364 aa21.68■■□□□ 1.06
NR1H3-222ENST00000483882 ABCC11Q96J66 1382 aa21.67■■□□□ 1.06
NR1H3-222ENST00000483882 FOXO3O43524 673 aa21.66■■□□□ 1.06
NR1H3-222ENST00000483882 XPCQ01831 940 aaPredicted RBP21.66■■□□□ 1.06
NR1H3-222ENST00000483882 RGS12O14924 1447 aa21.65■■□□□ 1.06
NR1H3-222ENST00000483882 YTHDC2Q9H6S0 1430 aaKnown RBP21.65■■□□□ 1.06
NR1H3-222ENST00000483882 KNDC1Q76NI1 1749 aa21.64■■□□□ 1.06
NR1H3-222ENST00000483882 USP21Q9UK80 565 aa21.64■■□□□ 1.05
NR1H3-222ENST00000483882 PXDNQ92626 1479 aa21.63■■□□□ 1.05
NR1H3-222ENST00000483882 COL22A1Q8NFW1 1626 aaPredicted RBP21.62■■□□□ 1.05
NR1H3-222ENST00000483882 NEUROD1Q13562 356 aa21.62■■□□□ 1.05
NR1H3-222ENST00000483882 C14orf93Q9H972 538 aaKnown RBP21.61■■□□□ 1.05
NR1H3-222ENST00000483882 CFAP70Q5T0N1 1121 aa21.6■■□□□ 1.05
NR1H3-222ENST00000483882 TRPC5Q9UL62 973 aaPredicted RBP21.6■■□□□ 1.05
NR1H3-222ENST00000483882 MYOM2P54296 1465 aa21.59■■□□□ 1.05
NR1H3-222ENST00000483882 FNBP4Q8N3X1 1017 aaPredicted RBP21.58■■□□□ 1.05
NR1H3-222ENST00000483882 FMN2Q9NZ56 1722 aa21.58■■□□□ 1.04
NR1H3-222ENST00000483882 CCER1Q8TC90 406 aaPredicted RBP21.57■■□□□ 1.04
NR1H3-222ENST00000483882 SIRT1Q96EB6 747 aa21.57■■□□□ 1.04
NR1H3-222ENST00000483882 NRXN1Q9ULB1 1477 aa21.57■■□□□ 1.04
NR1H3-222ENST00000483882 CLSPNQ9HAW4 1339 aa21.55■■□□□ 1.04
NR1H3-222ENST00000483882 SAFB2Q14151 953 aaKnown RBP eCLIP21.55■■□□□ 1.04
NR1H3-222ENST00000483882 L3MBTL2Q969R5 705 aa21.55■■□□□ 1.04
NR1H3-222ENST00000483882 ATRNO75882 1429 aa21.55■■□□□ 1.04
NR1H3-222ENST00000483882 KIF1AQ12756 1690 aa21.54■■□□□ 1.04
NR1H3-222ENST00000483882 DCAF11Q8TEB1 546 aa21.54■■□□□ 1.04
NR1H3-222ENST00000483882 PRAM1Q96QH2 718 aa21.54■■□□□ 1.04
NR1H3-222ENST00000483882 KRT28Q7Z3Y7 464 aa21.53■■□□□ 1.04
NR1H3-222ENST00000483882 KDM2AQ9Y2K7 1162 aa21.53■■□□□ 1.04
NR1H3-222ENST00000483882 SPATA31A3Q5VYP0 1347 aa21.53■■□□□ 1.04
NR1H3-222ENST00000483882 POGKQ9P215 609 aa21.52■■□□□ 1.04
NR1H3-222ENST00000483882 PHF8Q9UPP1 1060 aa21.52■■□□□ 1.04
NR1H3-222ENST00000483882 ATAD2Q6PL18 1390 aa21.5■■□□□ 1.03
NR1H3-222ENST00000483882 BCL9LQ86UU0 1499 aa21.5■■□□□ 1.03
NR1H3-222ENST00000483882 MARF1Q9Y4F3 1742 aaKnown RBP21.49■■□□□ 1.03
NR1H3-222ENST00000483882 PLEKHG5O94827 1062 aa21.48■■□□□ 1.03
NR1H3-222ENST00000483882 HAP1P54257 671 aaPredicted RBP21.48■■□□□ 1.03
NR1H3-222ENST00000483882 PSME1Q06323 249 aa21.48■■□□□ 1.03
NR1H3-222ENST00000483882 DLC1Q96QB1 1528 aa21.47■■□□□ 1.03
NR1H3-222ENST00000483882 LMOD2Q6P5Q4 547 aa21.46■■□□□ 1.03
NR1H3-222ENST00000483882 STAC3Q96MF2 364 aa21.46■■□□□ 1.03
NR1H3-222ENST00000483882 TRAK1Q9UPV9 953 aa21.46■■□□□ 1.03
NR1H3-222ENST00000483882 RGPD8O14715 1765 aaPredicted RBP21.46■■□□□ 1.03
NR1H3-222ENST00000483882 TNS3Q68CZ2 1445 aa21.46■■□□□ 1.03
NR1H3-222ENST00000483882 GJD4Q96KN9 370 aaPredicted RBP21.45■■□□□ 1.02
NR1H3-222ENST00000483882 UNC5CLQ8IV45 518 aa21.44■■□□□ 1.02
NR1H3-222ENST00000483882 PMFBP1Q8TBY8 1022 aa21.44■■□□□ 1.02
NR1H3-222ENST00000483882 ADGRB1O14514 1584 aa21.44■■□□□ 1.02
NR1H3-222ENST00000483882 CABLES1Q8TDN4 633 aa21.43■■□□□ 1.02
NR1H3-222ENST00000483882 HIRIP3Q9BW71 556 aaPredicted RBP21.43■■□□□ 1.02
NR1H3-222ENST00000483882 TONSLQ96HA7 1378 aa21.43■■□□□ 1.02
NR1H3-222ENST00000483882 SBNO1A3KN83 1393 aa21.42■■□□□ 1.02
NR1H3-222ENST00000483882 SLIT2O94813 1529 aa21.42■■□□□ 1.02
NR1H3-222ENST00000483882 NBPF8Q3BBV2 869 aa21.42■■□□□ 1.02
NR1H3-222ENST00000483882 ANKARQ7Z5J8 1434 aa21.42■■□□□ 1.02
NR1H3-222ENST00000483882 USP32Q8NFA0 1604 aa21.42■■□□□ 1.02
NR1H3-222ENST00000483882 MINK1Q8N4C8 1332 aaPredicted RBP21.41■■□□□ 1.02
NR1H3-222ENST00000483882 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.4■■□□□ 1.02
NR1H3-222ENST00000483882 ADGRB2O60241 1585 aa21.4■■□□□ 1.02
NR1H3-222ENST00000483882 ARHGEF10O15013 1369 aa21.39■■□□□ 1.02
NR1H3-222ENST00000483882 RALGAPBQ86X10 1494 aa21.39■■□□□ 1.01
NR1H3-222ENST00000483882 EIF3AQ14152 1382 aaKnown RBP21.37■■□□□ 1.01
NR1H3-222ENST00000483882 GLI3P10071 1580 aa21.36■■□□□ 1.01
NR1H3-222ENST00000483882 TIMELESSQ9UNS1 1208 aa21.36■■□□□ 1.01
NR1H3-222ENST00000483882 PRR36Q9H6K5 1346 aa21.35■■□□□ 1.01
NR1H3-222ENST00000483882 WASLO00401 505 aaPredicted RBP21.35■■□□□ 1.01
NR1H3-222ENST00000483882 NBPF1Q3BBV0 1214 aa21.35■■□□□ 1.01
NR1H3-222ENST00000483882 CCDC9Q9Y3X0 531 aaKnown RBP21.35■■□□□ 1.01
NR1H3-222ENST00000483882 GPRASP1Q5JY77 1395 aa21.35■■□□□ 1.01
NR1H3-222ENST00000483882 TULP4Q9NRJ4 1543 aa21.34■■□□□ 1.01
NR1H3-222ENST00000483882 ABCA3Q99758 1704 aa21.33■■□□□ 1.01
NR1H3-222ENST00000483882 VPS72Q15906 364 aa21.33■■□□□ 1.01
NR1H3-222ENST00000483882 PLCH1Q4KWH8 1693 aa21.32■■□□□ 1
NR1H3-222ENST00000483882 CCDC125Q86Z20 511 aa21.32■■□□□ 1
NR1H3-222ENST00000483882 NGDNQ8NEJ9 315 aaKnown RBP21.31■■□□□ 1
NR1H3-222ENST00000483882 FAM83GA6ND36 823 aa21.3■■□□□ 1
NR1H3-222ENST00000483882 SEPT12Q8IYM1 358 aa21.3■■□□□ 1
NR1H3-222ENST00000483882 TRPM3Q9HCF6 1732 aaPredicted RBP21.29■■□□□ 1
NR1H3-222ENST00000483882 NWD2Q9ULI1 1742 aa21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 245.9 ms