RNA–Protein interactions for RNA: ENST00000483876.1

COL17A1-206, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 622 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-206ENST00000483876 COL13A1Q5TAT6 717 aaPredicted RBP7.72□□□□□ -1.17
COL17A1-206ENST00000483876 KRT27Q7Z3Y8 459 aa7.72□□□□□ -1.17
COL17A1-206ENST00000483876 DUOX2Q9NRD8 1548 aa7.72□□□□□ -1.17
COL17A1-206ENST00000483876 RPRD2Q5VT52 1461 aaKnown RBP7.71□□□□□ -1.18
COL17A1-206ENST00000483876 KCNQ2O43526 872 aa7.71□□□□□ -1.18
COL17A1-206ENST00000483876 EZH2Q15910 746 aaKnown RBP7.71□□□□□ -1.18
COL17A1-206ENST00000483876 SPHKAPQ2M3C7 1700 aa7.7□□□□□ -1.18
COL17A1-206ENST00000483876 SIPA1L2Q9P2F8 1722 aaPredicted RBP7.7□□□□□ -1.18
COL17A1-206ENST00000483876 HSPA6P17066 643 aa7.7□□□□□ -1.18
COL17A1-206ENST00000483876 TNS4Q8IZW8 715 aa7.7□□□□□ -1.18
COL17A1-206ENST00000483876 L3MBTL2Q969R5 705 aa7.69□□□□□ -1.18
COL17A1-206ENST00000483876 UTRNP46939 3433 aa7.68□□□□□ -1.18
COL17A1-206ENST00000483876 GLI3P10071 1580 aa7.68□□□□□ -1.18
COL17A1-206ENST00000483876 UNC5CLQ8IV45 518 aa7.67□□□□□ -1.18
COL17A1-206ENST00000483876 FAM83GA6ND36 823 aa7.66□□□□□ -1.18
COL17A1-206ENST00000483876 NBPF8Q3BBV2 869 aa7.66□□□□□ -1.18
COL17A1-206ENST00000483876 NBPF14Q5TI25 921 aa7.66□□□□□ -1.18
COL17A1-206ENST00000483876 STAC3Q96MF2 364 aa7.66□□□□□ -1.18
COL17A1-206ENST00000483876 DISP2A7MBM2 1401 aa7.66□□□□□ -1.18
COL17A1-206ENST00000483876 MST1RQ04912 1400 aa7.66□□□□□ -1.18
COL17A1-206ENST00000483876 ONECUT3O60422 494 aaPredicted RBP7.65□□□□□ -1.18
COL17A1-206ENST00000483876 DCCP43146 1447 aa7.65□□□□□ -1.18
COL17A1-206ENST00000483876 EFCAB6Q5THR3 1501 aa7.65□□□□□ -1.18
COL17A1-206ENST00000483876 BRWD3Q6RI45 1802 aa7.65□□□□□ -1.18
COL17A1-206ENST00000483876 CAMKK2Q96RR4 588 aa7.65□□□□□ -1.18
COL17A1-206ENST00000483876 IQGAP3Q86VI3 1631 aa7.64□□□□□ -1.19
COL17A1-206ENST00000483876 KANK1Q14678 1352 aa7.64□□□□□ -1.19
COL17A1-206ENST00000483876 A0A0G2JS52 829 aa7.64□□□□□ -1.19
COL17A1-206ENST00000483876 MYT1Q01538 1121 aa7.64□□□□□ -1.19
COL17A1-206ENST00000483876 PIK3C2BO00750 1634 aa7.63□□□□□ -1.19
COL17A1-206ENST00000483876 SOS2Q07890 1332 aaPredicted RBP7.63□□□□□ -1.19
COL17A1-206ENST00000483876 CCDC9Q9Y3X0 531 aaKnown RBP7.63□□□□□ -1.19
COL17A1-206ENST00000483876 TBX22Q9Y458 520 aa7.63□□□□□ -1.19
COL17A1-206ENST00000483876 CHD2O14647 1828 aaKnown RBP7.63□□□□□ -1.19
COL17A1-206ENST00000483876 EIF4G2P78344 907 aaKnown RBP eCLIP7.62□□□□□ -1.19
COL17A1-206ENST00000483876 SYT17Q9BSW7 474 aa7.62□□□□□ -1.19
COL17A1-206ENST00000483876 EIF2AK4Q9P2K8 1649 aaKnown RBP7.62□□□□□ -1.19
COL17A1-206ENST00000483876 MYOM2P54296 1465 aa7.62□□□□□ -1.19
COL17A1-206ENST00000483876 CCDC144AA2RUR9 1427 aa7.61□□□□□ -1.19
COL17A1-206ENST00000483876 RGPD1P0DJD0 1748 aa7.61□□□□□ -1.19
COL17A1-206ENST00000483876 PARD3Q8TEW0 1356 aa7.61□□□□□ -1.19
COL17A1-206ENST00000483876 PLEKHG1Q9ULL1 1385 aa7.61□□□□□ -1.19
COL17A1-206ENST00000483876 ADRA2BP18089 450 aa7.61□□□□□ -1.19
COL17A1-206ENST00000483876 IDI1Q13907 227 aa7.61□□□□□ -1.19
COL17A1-206ENST00000483876 VPS72Q15906 364 aa7.61□□□□□ -1.19
COL17A1-206ENST00000483876 FAM182BQ5T319 152 aa7.61□□□□□ -1.19
COL17A1-206ENST00000483876 CHD4Q14839 1912 aa7.6□□□□□ -1.19
COL17A1-206ENST00000483876 APBA3O96018 575 aa7.6□□□□□ -1.19
COL17A1-206ENST00000483876 PIAS4Q8N2W9 510 aaPredicted RBP7.6□□□□□ -1.19
COL17A1-206ENST00000483876 FHDC1Q9C0D6 1143 aaPredicted RBP7.6□□□□□ -1.19
COL17A1-206ENST00000483876 SLIT2O94813 1529 aa7.6□□□□□ -1.19
COL17A1-206ENST00000483876 TNKS1BP1Q9C0C2 1729 aaKnown RBP7.6□□□□□ -1.19
COL17A1-206ENST00000483876 LMTK2Q8IWU2 1503 aa7.59□□□□□ -1.19
COL17A1-206ENST00000483876 MIER1Q8N108 512 aa7.59□□□□□ -1.19
COL17A1-206ENST00000483876 AMOTL2Q9Y2J4 779 aa7.59□□□□□ -1.19
COL17A1-206ENST00000483876 SPATA31E1Q6ZUB1 1445 aa7.59□□□□□ -1.19
COL17A1-206ENST00000483876 COL22A1Q8NFW1 1626 aaPredicted RBP7.59□□□□□ -1.19
COL17A1-206ENST00000483876 NRKQ7Z2Y5 1582 aa7.59□□□□□ -1.2
COL17A1-206ENST00000483876 HDGFP51858 240 aaKnown RBP7.58□□□□□ -1.2
COL17A1-206ENST00000483876 GPR162Q16538 588 aa7.58□□□□□ -1.2
COL17A1-206ENST00000483876 DNAJC5GQ8N7S2 189 aa7.58□□□□□ -1.2
COL17A1-206ENST00000483876 WWC3Q9ULE0 1092 aa7.58□□□□□ -1.2
COL17A1-206ENST00000483876 PIK3R4Q99570 1358 aa7.58□□□□□ -1.2
COL17A1-206ENST00000483876 TRIM37O94972 964 aa7.57□□□□□ -1.2
COL17A1-206ENST00000483876 HSPA5P11021 654 aaKnown RBP7.57□□□□□ -1.2
COL17A1-206ENST00000483876 APLP1P51693 650 aa7.57□□□□□ -1.2
COL17A1-206ENST00000483876 FAM98CQ17RN3 349 aaKnown RBP7.57□□□□□ -1.2
COL17A1-206ENST00000483876 DCAF11Q8TEB1 546 aa7.57□□□□□ -1.2
COL17A1-206ENST00000483876 ARHGAP31Q2M1Z3 1444 aa7.57□□□□□ -1.2
COL17A1-206ENST00000483876 ADGRB2O60241 1585 aa7.57□□□□□ -1.2
COL17A1-206ENST00000483876 SHANK3Q9BYB0 1731 aa7.57□□□□□ -1.2
COL17A1-206ENST00000483876 PTGER2P43116 358 aa7.56□□□□□ -1.2
COL17A1-206ENST00000483876 ORAI2Q96SN7 254 aa7.56□□□□□ -1.2
COL17A1-206ENST00000483876 GPBP1L1Q9HC44 474 aaPredicted RBP7.56□□□□□ -1.2
COL17A1-206ENST00000483876 ADGRB3O60242 1522 aa7.56□□□□□ -1.2
COL17A1-206ENST00000483876 ADGRL3Q9HAR2 1447 aa7.55□□□□□ -1.2
COL17A1-206ENST00000483876 CFAP65Q6ZU64 1925 aaKnown RBP7.55□□□□□ -1.2
COL17A1-206ENST00000483876 ZBTB7AO95365 584 aa7.55□□□□□ -1.2
COL17A1-206ENST00000483876 DDX10Q13206 875 aaKnown RBP7.55□□□□□ -1.2
COL17A1-206ENST00000483876 TRPM2O94759 1503 aa7.55□□□□□ -1.2
COL17A1-206ENST00000483876 TNS1Q9HBL0 1735 aaKnown RBP7.55□□□□□ -1.2
COL17A1-206ENST00000483876 C1orf167Q5SNV9 1468 aa7.55□□□□□ -1.2
COL17A1-206ENST00000483876 DLC1Q96QB1 1528 aa7.54□□□□□ -1.2
COL17A1-206ENST00000483876 LAMC1P11047 1609 aa7.54□□□□□ -1.2
COL17A1-206ENST00000483876 ATF5Q9Y2D1 282 aaPredicted RBP7.54□□□□□ -1.2
COL17A1-206ENST00000483876 KDM2AQ9Y2K7 1162 aa7.54□□□□□ -1.2
COL17A1-206ENST00000483876 MARF1Q9Y4F3 1742 aaKnown RBP7.54□□□□□ -1.2
COL17A1-206ENST00000483876 GPRASP1Q5JY77 1395 aa7.54□□□□□ -1.2
COL17A1-206ENST00000483876 E9PCH4 1651 aa7.54□□□□□ -1.2
COL17A1-206ENST00000483876 MYOM1P52179 1685 aa7.54□□□□□ -1.2
COL17A1-206ENST00000483876 RPGRIP1LQ68CZ1 1315 aa7.53□□□□□ -1.2
COL17A1-206ENST00000483876 ZFYVE9O95405 1425 aa7.53□□□□□ -1.2
COL17A1-206ENST00000483876 ADAMTS13Q76LX8 1427 aa7.53□□□□□ -1.2
COL17A1-206ENST00000483876 PRAG1Q86YV5 1406 aa7.53□□□□□ -1.2
COL17A1-206ENST00000483876 CEP152O94986 1710 aa7.53□□□□□ -1.2
COL17A1-206ENST00000483876 SLC24A1O60721 1099 aa7.53□□□□□ -1.2
COL17A1-206ENST00000483876 RGL3Q3MIN7 710 aa7.53□□□□□ -1.2
COL17A1-206ENST00000483876 HIRIP3Q9BW71 556 aaPredicted RBP7.53□□□□□ -1.2
COL17A1-206ENST00000483876 CARD11Q9BXL7 1154 aa7.53□□□□□ -1.2
COL17A1-206ENST00000483876 AATKQ6ZMQ8 1374 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms