RNA–Protein interactions for RNA: ENST00000483764.5

MRPL28-210, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 1 (best)

Gene MRPL28, Length 1,512 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-210ENST00000483764 KNDC1Q76NI1 1749 aa23.68■■□□□ 1.38
MRPL28-210ENST00000483764 CPS1P31327 1500 aa23.68■■□□□ 1.38
MRPL28-210ENST00000483764 MINK1Q8N4C8 1332 aaPredicted RBP23.67■■□□□ 1.38
MRPL28-210ENST00000483764 EVC2Q86UK5 1308 aa23.66■■□□□ 1.38
MRPL28-210ENST00000483764 KCNA6P17658 529 aa23.64■■□□□ 1.38
MRPL28-210ENST00000483764 GTF3C3Q9Y5Q9 886 aa23.64■■□□□ 1.37
MRPL28-210ENST00000483764 PTCH1Q13635 1447 aa23.63■■□□□ 1.37
MRPL28-210ENST00000483764 YTHDC1Q96MU7 727 aaKnown RBP23.63■■□□□ 1.37
MRPL28-210ENST00000483764 PUS7Q96PZ0 661 aaKnown RBP23.62■■□□□ 1.37
MRPL28-210ENST00000483764 XRN1Q8IZH2 1706 aaKnown RBP23.61■■□□□ 1.37
MRPL28-210ENST00000483764 CCER2I3L3R5 266 aa23.6■■□□□ 1.37
MRPL28-210ENST00000483764 TULP4Q9NRJ4 1543 aa23.6■■□□□ 1.37
MRPL28-210ENST00000483764 CHD2O14647 1828 aaKnown RBP23.59■■□□□ 1.37
MRPL28-210ENST00000483764 CDK19Q9BWU1 502 aa23.58■■□□□ 1.36
MRPL28-210ENST00000483764 STRCQ7RTU9 1775 aa23.57■■□□□ 1.36
MRPL28-210ENST00000483764 SRPK2P78362 688 aaKnown RBP23.57■■□□□ 1.36
MRPL28-210ENST00000483764 CABP2Q9NPB3 220 aa23.57■■□□□ 1.36
MRPL28-210ENST00000483764 WASLO00401 505 aaPredicted RBP23.55■■□□□ 1.36
MRPL28-210ENST00000483764 ANP32CO43423 234 aa23.53■■□□□ 1.36
MRPL28-210ENST00000483764 PELP1Q8IZL8 1130 aaKnown RBP23.53■■□□□ 1.36
MRPL28-210ENST00000483764 PANK3Q9H999 370 aa23.53■■□□□ 1.36
MRPL28-210ENST00000483764 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.51■■□□□ 1.35
MRPL28-210ENST00000483764 NWD1Q149M9 1564 aa23.51■■□□□ 1.35
MRPL28-210ENST00000483764 DMRT2Q9Y5R5 561 aa23.51■■□□□ 1.35
MRPL28-210ENST00000483764 ATAD2Q6PL18 1390 aa23.51■■□□□ 1.35
MRPL28-210ENST00000483764 TMC1Q8TDI8 760 aa23.5■■□□□ 1.35
MRPL28-210ENST00000483764 SLC12A5Q9H2X9 1139 aa23.49■■□□□ 1.35
MRPL28-210ENST00000483764 ADGRB2O60241 1585 aa23.48■■□□□ 1.35
MRPL28-210ENST00000483764 PROSER2Q86WR7 435 aaPredicted RBP23.48■■□□□ 1.35
MRPL28-210ENST00000483764 NKTRP30414 1462 aaKnown RBP23.47■■□□□ 1.35
MRPL28-210ENST00000483764 MYOM1P52179 1685 aa23.46■■□□□ 1.35
MRPL28-210ENST00000483764 PER1O15534 1290 aaPredicted RBP23.46■■□□□ 1.35
MRPL28-210ENST00000483764 RBM33Q96EV2 1170 aaKnown RBP23.46■■□□□ 1.35
MRPL28-210ENST00000483764 NINLQ9Y2I6 1382 aa23.45■■□□□ 1.34
MRPL28-210ENST00000483764 NUDT16Q96DE0 195 aaKnown RBP23.44■■□□□ 1.34
MRPL28-210ENST00000483764 C14orf37Q86TY3 774 aa23.42■■□□□ 1.34
MRPL28-210ENST00000483764 CABP1Q9NZU7 370 aa23.42■■□□□ 1.34
MRPL28-210ENST00000483764 CCDC61Q9Y6R9 512 aa23.42■■□□□ 1.34
MRPL28-210ENST00000483764 ADGRL3Q9HAR2 1447 aa23.41■■□□□ 1.34
MRPL28-210ENST00000483764 PRR36Q9H6K5 1346 aa23.4■■□□□ 1.34
MRPL28-210ENST00000483764 KNSTRNQ9Y448 316 aa23.4■■□□□ 1.34
MRPL28-210ENST00000483764 CARD14Q9BXL6 1004 aa23.39■■□□□ 1.34
MRPL28-210ENST00000483764 ZNF335Q9H4Z2 1342 aaPredicted RBP23.39■■□□□ 1.33
MRPL28-210ENST00000483764 TERF2IPQ9NYB0 399 aa23.38■■□□□ 1.33
MRPL28-210ENST00000483764 ANKRD36BQ8N2N9 1353 aa23.38■■□□□ 1.33
MRPL28-210ENST00000483764 STRCP1A6NGW2 1772 aa23.38■■□□□ 1.33
MRPL28-210ENST00000483764 ATP7BP35670 1465 aa23.38■■□□□ 1.33
MRPL28-210ENST00000483764 NUTM2FA1L443 756 aa23.38■■□□□ 1.33
MRPL28-210ENST00000483764 TMEM94Q12767 1356 aa23.37■■□□□ 1.33
MRPL28-210ENST00000483764 PPIP5K1Q6PFW1 1433 aa23.37■■□□□ 1.33
MRPL28-210ENST00000483764 NCOA3Q9Y6Q9 1424 aa23.37■■□□□ 1.33
MRPL28-210ENST00000483764 PRKRIP1Q9H875 184 aaPredicted RBP23.37■■□□□ 1.33
MRPL28-210ENST00000483764 NALCNQ8IZF0 1738 aa23.36■■□□□ 1.33
MRPL28-210ENST00000483764 CNGB1Q14028 1251 aaPredicted RBP23.35■■□□□ 1.33
MRPL28-210ENST00000483764 HDGFL2Q7Z4V5 671 aaPredicted RBP23.35■■□□□ 1.33
MRPL28-210ENST00000483764 C19orf44Q9H6X5 657 aa23.35■■□□□ 1.33
MRPL28-210ENST00000483764 CDC42BPGQ6DT37 1551 aa23.35■■□□□ 1.33
MRPL28-210ENST00000483764 ILDR1Q86SU0 546 aaPredicted RBP23.34■■□□□ 1.33
MRPL28-210ENST00000483764 A0A1W2PP64 1363 aa23.34■■□□□ 1.33
MRPL28-210ENST00000483764 ANKARQ7Z5J8 1434 aa23.33■■□□□ 1.33
MRPL28-210ENST00000483764 CD163L1Q9NR16 1453 aa23.33■■□□□ 1.33
MRPL28-210ENST00000483764 PLEKHG3A1L390 1219 aa23.33■■□□□ 1.32
MRPL28-210ENST00000483764 AMER1Q5JTC6 1135 aaPredicted RBP23.33■■□□□ 1.32
MRPL28-210ENST00000483764 NSD3Q9BZ95 1437 aa23.32■■□□□ 1.32
MRPL28-210ENST00000483764 KTN1Q86UP2 1357 aaKnown RBP23.31■■□□□ 1.32
MRPL28-210ENST00000483764 CC2D1BQ5T0F9 858 aaKnown RBP23.31■■□□□ 1.32
MRPL28-210ENST00000483764 FMN2Q9NZ56 1722 aa23.3■■□□□ 1.32
MRPL28-210ENST00000483764 NPC1L1Q9UHC9 1359 aa23.3■■□□□ 1.32
MRPL28-210ENST00000483764 USP32Q8NFA0 1604 aa23.29■■□□□ 1.32
MRPL28-210ENST00000483764 RALBP1Q15311 655 aa23.29■■□□□ 1.32
MRPL28-210ENST00000483764 LRRC7Q96NW7 1537 aa23.29■■□□□ 1.32
MRPL28-210ENST00000483764 CPSF1Q10570 1443 aaKnown RBP23.29■■□□□ 1.32
MRPL28-210ENST00000483764 ZNF692Q9BU19 519 aaPredicted RBP23.28■■□□□ 1.32
MRPL28-210ENST00000483764 ATF3P18847 181 aa23.27■■□□□ 1.32
MRPL28-210ENST00000483764 TOPAZ1Q8N9V7 1692 aa23.27■■□□□ 1.32
MRPL28-210ENST00000483764 ACEP12821 1306 aa23.27■■□□□ 1.32
MRPL28-210ENST00000483764 CGNL1Q0VF96 1302 aa23.27■■□□□ 1.32
MRPL28-210ENST00000483764 PMFBP1Q8TBY8 1022 aa23.25■■□□□ 1.31
MRPL28-210ENST00000483764 MSH6P52701 1360 aa23.25■■□□□ 1.31
MRPL28-210ENST00000483764 PARD3Q8TEW0 1356 aa23.25■■□□□ 1.31
MRPL28-210ENST00000483764 DCCP43146 1447 aa23.25■■□□□ 1.31
MRPL28-210ENST00000483764 CADPS2Q86UW7 1296 aa23.23■■□□□ 1.31
MRPL28-210ENST00000483764 NGDNQ8NEJ9 315 aaKnown RBP23.23■■□□□ 1.31
MRPL28-210ENST00000483764 PHF8Q9UPP1 1060 aa23.23■■□□□ 1.31
MRPL28-210ENST00000483764 ITSN1Q15811 1721 aa23.22■■□□□ 1.31
MRPL28-210ENST00000483764 POLR3AO14802 1390 aaPredicted RBP23.22■■□□□ 1.31
MRPL28-210ENST00000483764 ESCO1Q5FWF5 840 aa23.22■■□□□ 1.31
MRPL28-210ENST00000483764 RGPD8O14715 1765 aaPredicted RBP23.21■■□□□ 1.31
MRPL28-210ENST00000483764 EDC4Q6P2E9 1401 aaKnown RBP23.2■■□□□ 1.31
MRPL28-210ENST00000483764 NSD2O96028 1365 aa23.2■■□□□ 1.3
MRPL28-210ENST00000483764 MYBBP1AQ9BQG0 1328 aaKnown RBP23.19■■□□□ 1.3
MRPL28-210ENST00000483764 C1orf167Q5SNV9 1468 aa23.18■■□□□ 1.3
MRPL28-210ENST00000483764 FYB1O15117 783 aa23.18■■□□□ 1.3
MRPL28-210ENST00000483764 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.18■■□□□ 1.3
MRPL28-210ENST00000483764 XIRP1Q702N8 1843 aaKnown RBP23.18■■□□□ 1.3
MRPL28-210ENST00000483764 ORAI2Q96SN7 254 aa23.18■■□□□ 1.3
MRPL28-210ENST00000483764 MST1RQ04912 1400 aa23.17■■□□□ 1.3
MRPL28-210ENST00000483764 USP6P35125 1406 aa23.17■■□□□ 1.3
MRPL28-210ENST00000483764 MORC1Q86VD1 984 aa23.17■■□□□ 1.3
MRPL28-210ENST00000483764 AKAP12Q02952 1782 aa23.16■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms