RNA–Protein interactions for RNA: ENST00000483684.1

COMMD3-213, Transcript of COMM domain containing 3, humanhuman

TSL 5

Gene COMMD3, Length 722 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-213ENST00000483684 ZBTB24O43167 697 aaPredicted RBP11.56□□□□□ -0.56
COMMD3-213ENST00000483684 SMCPP49901 116 aaPredicted RBP11.56□□□□□ -0.56
COMMD3-213ENST00000483684 Q3C1V9 767 aa11.56□□□□□ -0.56
COMMD3-213ENST00000483684 CTC1Q2NKJ3 1217 aa11.55□□□□□ -0.56
COMMD3-213ENST00000483684 IRF6O14896 467 aa11.54□□□□□ -0.56
COMMD3-213ENST00000483684 HAP1P54257 671 aaPredicted RBP11.54□□□□□ -0.56
COMMD3-213ENST00000483684 WNT7AO00755 349 aa11.53□□□□□ -0.56
COMMD3-213ENST00000483684 KDM4AO75164 1064 aa11.53□□□□□ -0.56
COMMD3-213ENST00000483684 AXIN1O15169 862 aa11.52□□□□□ -0.57
COMMD3-213ENST00000483684 DXOO77932 396 aaKnown RBP11.52□□□□□ -0.57
COMMD3-213ENST00000483684 TRIM32Q13049 653 aa11.52□□□□□ -0.57
COMMD3-213ENST00000483684 TREML4Q6UXN2 200 aa11.52□□□□□ -0.57
COMMD3-213ENST00000483684 USB1Q9BQ65 265 aaKnown RBP11.52□□□□□ -0.57
COMMD3-213ENST00000483684 GMPR2Q9P2T1 348 aaKnown RBP11.5□□□□□ -0.57
COMMD3-213ENST00000483684 TTC24A2A3L6 582 aaPredicted RBP11.49□□□□□ -0.57
COMMD3-213ENST00000483684 SMPD1P17405 629 aa11.49□□□□□ -0.57
COMMD3-213ENST00000483684 USP46P62068 366 aa11.49□□□□□ -0.57
COMMD3-213ENST00000483684 SNIP1Q8TAD8 396 aaKnown RBP11.49□□□□□ -0.57
COMMD3-213ENST00000483684 HLA-CQ95604 372 aa11.49□□□□□ -0.57
COMMD3-213ENST00000483684 MINK1Q8N4C8 1332 aaPredicted RBP11.49□□□□□ -0.57
COMMD3-213ENST00000483684 MDM2Q00987 491 aaPredicted RBP11.48□□□□□ -0.57
COMMD3-213ENST00000483684 HOXA2O43364 376 aa11.47□□□□□ -0.57
COMMD3-213ENST00000483684 MRGPRX2Q96LB1 330 aa11.47□□□□□ -0.57
COMMD3-213ENST00000483684 CCDC102AQ96A19 550 aa11.44□□□□□ -0.58
COMMD3-213ENST00000483684 C11orf95C9JLR9 678 aaPredicted RBP11.43□□□□□ -0.58
COMMD3-213ENST00000483684 J3QL48 77 aa11.43□□□□□ -0.58
COMMD3-213ENST00000483684 SKOR1P84550 965 aa11.42□□□□□ -0.58
COMMD3-213ENST00000483684 GUCA2AQ02747 115 aa11.42□□□□□ -0.58
COMMD3-213ENST00000483684 REPIN1Q9BWE0 567 aaKnown RBP11.42□□□□□ -0.58
COMMD3-213ENST00000483684 GPCPD1Q9NPB8 672 aa11.42□□□□□ -0.58
COMMD3-213ENST00000483684 FAM217BQ9NTX9 383 aaPredicted RBP11.42□□□□□ -0.58
COMMD3-213ENST00000483684 TULP1O00294 542 aaPredicted RBP11.41□□□□□ -0.58
COMMD3-213ENST00000483684 ATP13A2Q9NQ11 1180 aa11.4□□□□□ -0.58
COMMD3-213ENST00000483684 JUNDP17535 347 aa11.39□□□□□ -0.59
COMMD3-213ENST00000483684 CLCN1P35523 988 aa11.39□□□□□ -0.59
COMMD3-213ENST00000483684 WNT7BP56706 349 aa11.39□□□□□ -0.59
COMMD3-213ENST00000483684 NFX1Q12986 1120 aaKnown RBP11.39□□□□□ -0.59
COMMD3-213ENST00000483684 RC3H1Q5TC82 1133 aaKnown RBP11.39□□□□□ -0.59
COMMD3-213ENST00000483684 CCDC24Q8N4L8 307 aa11.39□□□□□ -0.59
COMMD3-213ENST00000483684 WFS1O76024 890 aa11.38□□□□□ -0.59
COMMD3-213ENST00000483684 VSIG10Q8N0Z9 540 aa11.38□□□□□ -0.59
COMMD3-213ENST00000483684 HPS1Q92902 700 aa11.38□□□□□ -0.59
COMMD3-213ENST00000483684 SYMPKQ92797 1274 aaKnown RBP11.37□□□□□ -0.59
COMMD3-213ENST00000483684 RETREG3Q86VR2 466 aa11.35□□□□□ -0.59
COMMD3-213ENST00000483684 SNRPBP14678 240 aaKnown RBP11.34□□□□□ -0.59
COMMD3-213ENST00000483684 TRIM47Q96LD4 638 aa11.34□□□□□ -0.59
COMMD3-213ENST00000483684 PTCRAQ6ISU1 281 aaPredicted RBP11.33□□□□□ -0.6
COMMD3-213ENST00000483684 PCDHGC3Q9UN70 934 aa11.33□□□□□ -0.6
COMMD3-213ENST00000483684 SIAH2O43255 324 aa11.32□□□□□ -0.6
COMMD3-213ENST00000483684 NUTM1Q86Y26 1132 aa11.32□□□□□ -0.6
COMMD3-213ENST00000483684 NUDT12Q9BQG2 462 aa11.32□□□□□ -0.6
COMMD3-213ENST00000483684 SENP2Q9HC62 589 aa11.32□□□□□ -0.6
COMMD3-213ENST00000483684 WIPF1O43516 503 aa11.31□□□□□ -0.6
COMMD3-213ENST00000483684 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.31□□□□□ -0.6
COMMD3-213ENST00000483684 LCE2CQ5TA81 110 aa11.3□□□□□ -0.6
COMMD3-213ENST00000483684 FDX1P10109 184 aa11.29□□□□□ -0.6
COMMD3-213ENST00000483684 TERTO14746 1132 aaKnown RBP11.27□□□□□ -0.61
COMMD3-213ENST00000483684 ALDH1A1P00352 501 aa11.27□□□□□ -0.61
COMMD3-213ENST00000483684 SSTR3P32745 418 aaPredicted RBP11.27□□□□□ -0.61
COMMD3-213ENST00000483684 SPIRE2Q8WWL2 714 aa11.27□□□□□ -0.61
COMMD3-213ENST00000483684 KIFC2Q96AC6 838 aa11.27□□□□□ -0.61
COMMD3-213ENST00000483684 KRI1Q8N9T8 703 aaKnown RBP11.26□□□□□ -0.61
COMMD3-213ENST00000483684 SH3BP2P78314 561 aa11.25□□□□□ -0.61
COMMD3-213ENST00000483684 C6orf229H3BNL8 230 aa11.24□□□□□ -0.61
COMMD3-213ENST00000483684 CCNYL3P0C7X3 344 aa11.24□□□□□ -0.61
COMMD3-213ENST00000483684 MS4A1P11836 297 aa11.24□□□□□ -0.61
COMMD3-213ENST00000483684 EHBP1Q8NDI1 1231 aa11.24□□□□□ -0.61
COMMD3-213ENST00000483684 PTPRNQ16849 979 aa11.23□□□□□ -0.61
COMMD3-213ENST00000483684 EVA1BQ9NVM1 165 aa11.23□□□□□ -0.61
COMMD3-213ENST00000483684 NDUFV2P19404 249 aa11.22□□□□□ -0.61
COMMD3-213ENST00000483684 BARGINQ6ZT62 677 aa11.22□□□□□ -0.61
COMMD3-213ENST00000483684 STK17AQ9UEE5 414 aa11.22□□□□□ -0.61
COMMD3-213ENST00000483684 MOXD2PA6NHM9 499 aa11.21□□□□□ -0.61
COMMD3-213ENST00000483684 AMHR2Q16671 573 aa11.21□□□□□ -0.61
COMMD3-213ENST00000483684 UNC93B1Q9H1C4 597 aa11.21□□□□□ -0.61
COMMD3-213ENST00000483684 INSM1Q01101 510 aaPredicted RBP11.2□□□□□ -0.62
COMMD3-213ENST00000483684 ZMYND10O75800 440 aa11.19□□□□□ -0.62
COMMD3-213ENST00000483684 TRIM46Q7Z4K8 759 aa11.19□□□□□ -0.62
COMMD3-213ENST00000483684 KCNH2Q12809 1159 aa11.18□□□□□ -0.62
COMMD3-213ENST00000483684 DESI1Q6ICB0 168 aa11.18□□□□□ -0.62
COMMD3-213ENST00000483684 PRR7Q8TB68 274 aa11.18□□□□□ -0.62
COMMD3-213ENST00000483684 WASF2Q9Y6W5 498 aa11.18□□□□□ -0.62
COMMD3-213ENST00000483684 CAPN5O15484 640 aaPredicted RBP11.17□□□□□ -0.62
COMMD3-213ENST00000483684 LOC100996750A0A140TA64 210 aa11.16□□□□□ -0.62
COMMD3-213ENST00000483684 BMP1P13497 986 aa11.16□□□□□ -0.62
COMMD3-213ENST00000483684 MTMR2Q13614 643 aa11.16□□□□□ -0.62
COMMD3-213ENST00000483684 MPNDQ8N594 471 aa11.16□□□□□ -0.62
COMMD3-213ENST00000483684 BAP1Q92560 729 aa11.16□□□□□ -0.62
COMMD3-213ENST00000483684 KRTAP4-6Q9BYQ5 205 aa11.16□□□□□ -0.62
COMMD3-213ENST00000483684 SPDYE5A6NIY4 337 aa11.15□□□□□ -0.62
COMMD3-213ENST00000483684 TTLL12Q14166 644 aaPredicted RBP11.15□□□□□ -0.62
COMMD3-213ENST00000483684 GIGYF2Q6Y7W6 1299 aaKnown RBP11.15□□□□□ -0.62
COMMD3-213ENST00000483684 GJA5P36382 358 aa11.14□□□□□ -0.63
COMMD3-213ENST00000483684 LINC01559Q495D7 138 aa11.14□□□□□ -0.63
COMMD3-213ENST00000483684 ZNF511Q8NB15 262 aa11.14□□□□□ -0.63
COMMD3-213ENST00000483684 NXF1Q9UBU9 619 aaKnown RBP11.14□□□□□ -0.63
COMMD3-213ENST00000483684 TLL2Q9Y6L7 1015 aa11.14□□□□□ -0.63
COMMD3-213ENST00000483684 VARSP26640 1264 aaKnown RBP11.13□□□□□ -0.63
COMMD3-213ENST00000483684 ZC3H15Q8WU90 426 aaKnown RBP11.12□□□□□ -0.63
COMMD3-213ENST00000483684 BEGAINQ9BUH8 593 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms