RNA–Protein interactions for RNA: ENST00000483293.1

PMS1-219, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5

Gene PMS1, Length 663 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-219ENST00000483293 PCDHGC3Q9UN70 934 aa11.86□□□□□ -0.51
PMS1-219ENST00000483293 NUTM2BA6NNL0 878 aaPredicted RBP11.85□□□□□ -0.51
PMS1-219ENST00000483293 NUTM2EB1AL46 878 aaPredicted RBP11.85□□□□□ -0.51
PMS1-219ENST00000483293 QPCTQ16769 361 aa11.85□□□□□ -0.51
PMS1-219ENST00000483293 GRIPAP1Q4V328 841 aa11.85□□□□□ -0.51
PMS1-219ENST00000483293 NUTM2DQ5VT03 806 aaPredicted RBP11.85□□□□□ -0.51
PMS1-219ENST00000483293 NUTM2AQ8IVF1 878 aaPredicted RBP11.85□□□□□ -0.51
PMS1-219ENST00000483293 SYMPKQ92797 1274 aaKnown RBP11.85□□□□□ -0.51
PMS1-219ENST00000483293 PRKD2Q9BZL6 878 aa11.84□□□□□ -0.51
PMS1-219ENST00000483293 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.83□□□□□ -0.52
PMS1-219ENST00000483293 PCDHB3Q9Y5E6 796 aa11.83□□□□□ -0.52
PMS1-219ENST00000483293 COPS2P61201 443 aa11.82□□□□□ -0.52
PMS1-219ENST00000483293 MORN1Q5T089 497 aa11.82□□□□□ -0.52
PMS1-219ENST00000483293 SLC27A5Q9Y2P5 690 aa11.82□□□□□ -0.52
PMS1-219ENST00000483293 C6orf229H3BNL8 230 aa11.81□□□□□ -0.52
PMS1-219ENST00000483293 RTL5Q5HYW3 569 aaPredicted RBP11.81□□□□□ -0.52
PMS1-219ENST00000483293 PRR14Q9BWN1 585 aa11.81□□□□□ -0.52
PMS1-219ENST00000483293 HRCP23327 699 aa11.8□□□□□ -0.52
PMS1-219ENST00000483293 BLOC1S3Q6QNY0 202 aa11.8□□□□□ -0.52
PMS1-219ENST00000483293 LILRB3O75022 631 aa11.78□□□□□ -0.52
PMS1-219ENST00000483293 TSC1Q92574 1164 aa11.78□□□□□ -0.52
PMS1-219ENST00000483293 RFC5P40937 340 aa11.77□□□□□ -0.53
PMS1-219ENST00000483293 SCUBE3Q8IX30 993 aa11.77□□□□□ -0.53
PMS1-219ENST00000483293 ZBTB3Q9H5J0 574 aa11.77□□□□□ -0.53
PMS1-219ENST00000483293 GJA5P36382 358 aa11.75□□□□□ -0.53
PMS1-219ENST00000483293 MTMR2Q13614 643 aa11.75□□□□□ -0.53
PMS1-219ENST00000483293 RNF19BQ6ZMZ0 732 aa11.75□□□□□ -0.53
PMS1-219ENST00000483293 AP1G2O75843 785 aa11.74□□□□□ -0.53
PMS1-219ENST00000483293 TUSC1Q2TAM9 212 aa11.74□□□□□ -0.53
PMS1-219ENST00000483293 C14orf37Q86TY3 774 aa11.74□□□□□ -0.53
PMS1-219ENST00000483293 TIMELESSQ9UNS1 1208 aa11.74□□□□□ -0.53
PMS1-219ENST00000483293 V9GY48 417 aaPredicted RBP11.74□□□□□ -0.53
PMS1-219ENST00000483293 NR1I2O75469 434 aa11.73□□□□□ -0.53
PMS1-219ENST00000483293 PRPF38BQ5VTL8 546 aaKnown RBP11.73□□□□□ -0.53
PMS1-219ENST00000483293 PPP2R2DQ66LE6 453 aa11.73□□□□□ -0.53
PMS1-219ENST00000483293 MTRQ99707 1265 aa11.72□□□□□ -0.53
PMS1-219ENST00000483293 Q3C1V9 767 aa11.71□□□□□ -0.53
PMS1-219ENST00000483293 CFAP99D6REC4 459 aa11.7□□□□□ -0.54
PMS1-219ENST00000483293 PRR7Q8TB68 274 aa11.7□□□□□ -0.54
PMS1-219ENST00000483293 ZNF516Q92618 1163 aa11.7□□□□□ -0.54
PMS1-219ENST00000483293 PDZRN3Q9UPQ7 1066 aa11.7□□□□□ -0.54
PMS1-219ENST00000483293 TLL1O43897 1013 aa11.69□□□□□ -0.54
PMS1-219ENST00000483293 FMNL1O95466 1100 aaPredicted RBP11.69□□□□□ -0.54
PMS1-219ENST00000483293 TJAP1Q5JTD0 557 aa11.69□□□□□ -0.54
PMS1-219ENST00000483293 BRICD5Q6PL45 260 aa11.69□□□□□ -0.54
PMS1-219ENST00000483293 SNRKQ9NRH2 765 aa11.69□□□□□ -0.54
PMS1-219ENST00000483293 CTDSPL2Q05D32 466 aa11.68□□□□□ -0.54
PMS1-219ENST00000483293 TMEM259Q4ZIN3 620 aa11.68□□□□□ -0.54
PMS1-219ENST00000483293 PPP1R18Q6NYC8 613 aa11.67□□□□□ -0.54
PMS1-219ENST00000483293 RETREG3Q86VR2 466 aa11.66□□□□□ -0.54
PMS1-219ENST00000483293 THAP11Q96EK4 314 aa11.66□□□□□ -0.54
PMS1-219ENST00000483293 SPSB2Q99619 263 aa11.66□□□□□ -0.54
PMS1-219ENST00000483293 USB1Q9BQ65 265 aaKnown RBP11.66□□□□□ -0.54
PMS1-219ENST00000483293 SPDYE5A6NIY4 337 aa11.65□□□□□ -0.54
PMS1-219ENST00000483293 ZPR1O75312 459 aa11.65□□□□□ -0.54
PMS1-219ENST00000483293 NKX2-3Q8TAU0 364 aa11.65□□□□□ -0.54
PMS1-219ENST00000483293 IL21Q9HBE4 155 aa11.64□□□□□ -0.55
PMS1-219ENST00000483293 FLIIQ13045 1269 aa11.63□□□□□ -0.55
PMS1-219ENST00000483293 HELBQ8NG08 1087 aaPredicted RBP11.63□□□□□ -0.55
PMS1-219ENST00000483293 USP17L8P0C7I0 530 aa11.62□□□□□ -0.55
PMS1-219ENST00000483293 MCM6Q14566 821 aa11.62□□□□□ -0.55
PMS1-219ENST00000483293 FAM160A2Q8N612 972 aaPredicted RBP11.62□□□□□ -0.55
PMS1-219ENST00000483293 LRRN4Q8WUT4 740 aa11.62□□□□□ -0.55
PMS1-219ENST00000483293 PRDM9Q9NQV7 894 aa11.62□□□□□ -0.55
PMS1-219ENST00000483293 PER1O15534 1290 aaPredicted RBP11.61□□□□□ -0.55
PMS1-219ENST00000483293 LCE2AQ5TA79 106 aaPredicted RBP11.61□□□□□ -0.55
PMS1-219ENST00000483293 BANK1Q8NDB2 785 aa11.61□□□□□ -0.55
PMS1-219ENST00000483293 SALL2Q9Y467 1007 aaPredicted RBP11.61□□□□□ -0.55
PMS1-219ENST00000483293 POTECB2RU33 542 aa11.6□□□□□ -0.55
PMS1-219ENST00000483293 CLUAP1Q96AJ1 413 aa11.59□□□□□ -0.55
PMS1-219ENST00000483293 UBTFP17480 764 aaKnown RBP11.58□□□□□ -0.56
PMS1-219ENST00000483293 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.58□□□□□ -0.56
PMS1-219ENST00000483293 ADH1BP00325 375 aa11.57□□□□□ -0.56
PMS1-219ENST00000483293 MTMR14Q8NCE2 650 aa11.57□□□□□ -0.56
PMS1-219ENST00000483293 POM121Q96HA1 1249 aa11.57□□□□□ -0.56
PMS1-219ENST00000483293 HMX1Q9NP08 348 aaPredicted RBP11.57□□□□□ -0.56
PMS1-219ENST00000483293 JUNDP17535 347 aa11.56□□□□□ -0.56
PMS1-219ENST00000483293 SLC6A16Q9GZN6 736 aa11.56□□□□□ -0.56
PMS1-219ENST00000483293 EPS8L1Q8TE68 723 aa11.55□□□□□ -0.56
PMS1-219ENST00000483293 S1PR4O95977 384 aa11.54□□□□□ -0.56
PMS1-219ENST00000483293 LYPD8Q6UX82 237 aa11.54□□□□□ -0.56
PMS1-219ENST00000483293 TREML4Q6UXN2 200 aa11.54□□□□□ -0.56
PMS1-219ENST00000483293 CCDC24Q8N4L8 307 aa11.54□□□□□ -0.56
PMS1-219ENST00000483293 ZMYND15Q9H091 742 aa11.54□□□□□ -0.56
PMS1-219ENST00000483293 CTHP32929 405 aa11.53□□□□□ -0.56
PMS1-219ENST00000483293 MYT1Q01538 1121 aa11.53□□□□□ -0.56
PMS1-219ENST00000483293 NR6A1Q15406 480 aa11.53□□□□□ -0.56
PMS1-219ENST00000483293 MSS51Q4VC12 460 aa11.53□□□□□ -0.56
PMS1-219ENST00000483293 PPEF1O14829 653 aaPredicted RBP11.52□□□□□ -0.57
PMS1-219ENST00000483293 TRIM67Q6ZTA4 783 aa11.52□□□□□ -0.57
PMS1-219ENST00000483293 ERICH6Q7L0X2 663 aa11.52□□□□□ -0.57
PMS1-219ENST00000483293 GDPD2Q9HCC8 539 aa11.52□□□□□ -0.57
PMS1-219ENST00000483293 RAD21O60216 631 aa11.51□□□□□ -0.57
PMS1-219ENST00000483293 DESI1Q6ICB0 168 aa11.51□□□□□ -0.57
PMS1-219ENST00000483293 SUPT5HO00267 1087 aaKnown RBP11.5□□□□□ -0.57
PMS1-219ENST00000483293 DXOO77932 396 aaKnown RBP11.5□□□□□ -0.57
PMS1-219ENST00000483293 MAP10Q9P2G4 905 aa11.5□□□□□ -0.57
PMS1-219ENST00000483293 TBC1D2BQ9UPU7 963 aa11.5□□□□□ -0.57
PMS1-219ENST00000483293 COG6Q9Y2V7 657 aa11.5□□□□□ -0.57
PMS1-219ENST00000483293 ABL2P42684 1182 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 96.7 ms