RNA–Protein interactions for RNA: ENST00000483146.1

COMMD2-204, Transcript of COMM domain containing 2, humanhuman

TSL 2

Gene COMMD2, Length 721 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD2-204ENST00000483146 PARP9Q8IXQ6 854 aa12.8□□□□□ -0.36
COMMD2-204ENST00000483146 USB1Q9BQ65 265 aaKnown RBP12.8□□□□□ -0.36
COMMD2-204ENST00000483146 SYMPKQ92797 1274 aaKnown RBP12.79□□□□□ -0.36
COMMD2-204ENST00000483146 TRIM67Q6ZTA4 783 aa12.78□□□□□ -0.36
COMMD2-204ENST00000483146 SPIRE2Q8WWL2 714 aa12.78□□□□□ -0.36
COMMD2-204ENST00000483146 SLC24A3Q9HC58 644 aa12.78□□□□□ -0.36
COMMD2-204ENST00000483146 BCANQ96GW7 911 aa12.77□□□□□ -0.37
COMMD2-204ENST00000483146 BEGAINQ9BUH8 593 aa12.77□□□□□ -0.37
COMMD2-204ENST00000483146 FDX1P10109 184 aa12.76□□□□□ -0.37
COMMD2-204ENST00000483146 NDUFV2P19404 249 aa12.75□□□□□ -0.37
COMMD2-204ENST00000483146 TNFRSF10AO00220 468 aa12.74□□□□□ -0.37
COMMD2-204ENST00000483146 RPIAP49247 311 aa12.74□□□□□ -0.37
COMMD2-204ENST00000483146 MMP16P51512 607 aa12.74□□□□□ -0.37
COMMD2-204ENST00000483146 MOXD2PA6NHM9 499 aa12.73□□□□□ -0.37
COMMD2-204ENST00000483146 MS4A1P11836 297 aa12.73□□□□□ -0.37
COMMD2-204ENST00000483146 TRAF7Q6Q0C0 670 aa12.73□□□□□ -0.37
COMMD2-204ENST00000483146 PCDHGC3Q9UN70 934 aa12.73□□□□□ -0.37
COMMD2-204ENST00000483146 C6orf229H3BNL8 230 aa12.72□□□□□ -0.37
COMMD2-204ENST00000483146 ZBTB24O43167 697 aaPredicted RBP12.72□□□□□ -0.37
COMMD2-204ENST00000483146 CD2BP2O95400 341 aaKnown RBP12.72□□□□□ -0.37
COMMD2-204ENST00000483146 PDE4DQ08499 809 aa12.72□□□□□ -0.37
COMMD2-204ENST00000483146 LCE2BO14633 110 aa12.71□□□□□ -0.37
COMMD2-204ENST00000483146 GDF9O60383 454 aa12.71□□□□□ -0.37
COMMD2-204ENST00000483146 DXOO77932 396 aaKnown RBP12.71□□□□□ -0.37
COMMD2-204ENST00000483146 FOXC1Q12948 553 aa12.71□□□□□ -0.37
COMMD2-204ENST00000483146 CCDC24Q8N4L8 307 aa12.71□□□□□ -0.37
COMMD2-204ENST00000483146 PRR20EP86478 221 aa12.7□□□□□ -0.38
COMMD2-204ENST00000483146 PRR20CP86479 221 aa12.7□□□□□ -0.38
COMMD2-204ENST00000483146 PRR20DP86480 221 aa12.7□□□□□ -0.38
COMMD2-204ENST00000483146 PRR20BP86481 221 aa12.7□□□□□ -0.38
COMMD2-204ENST00000483146 PRR20AP86496 221 aa12.7□□□□□ -0.38
COMMD2-204ENST00000483146 RETREG3Q86VR2 466 aa12.69□□□□□ -0.38
COMMD2-204ENST00000483146 TBC1D2Q9BYX2 928 aa12.69□□□□□ -0.38
COMMD2-204ENST00000483146 JUNDP17535 347 aa12.67□□□□□ -0.38
COMMD2-204ENST00000483146 PKD2L1Q9P0L9 805 aa12.67□□□□□ -0.38
COMMD2-204ENST00000483146 PKDCCQ504Y2 493 aa12.65□□□□□ -0.38
COMMD2-204ENST00000483146 DIXDC1Q155Q3 683 aa12.64□□□□□ -0.39
COMMD2-204ENST00000483146 FAM187AA6NFU0 413 aa12.63□□□□□ -0.39
COMMD2-204ENST00000483146 TRIM32Q13049 653 aa12.63□□□□□ -0.39
COMMD2-204ENST00000483146 RSBN1LQ6PCB5 846 aaPredicted RBP12.62□□□□□ -0.39
COMMD2-204ENST00000483146 MTMR2Q13614 643 aa12.61□□□□□ -0.39
COMMD2-204ENST00000483146 NUDT12Q9BQG2 462 aa12.61□□□□□ -0.39
COMMD2-204ENST00000483146 PCDHB15Q9Y5E8 787 aa12.61□□□□□ -0.39
COMMD2-204ENST00000483146 DGAT1O75907 488 aa12.6□□□□□ -0.39
COMMD2-204ENST00000483146 PRR7Q8TB68 274 aa12.6□□□□□ -0.39
COMMD2-204ENST00000483146 RIC3Q7Z5B4 369 aa12.58□□□□□ -0.4
COMMD2-204ENST00000483146 SPDYE5A6NIY4 337 aa12.57□□□□□ -0.4
COMMD2-204ENST00000483146 SPTLC1O15269 473 aa12.57□□□□□ -0.4
COMMD2-204ENST00000483146 GJA5P36382 358 aa12.57□□□□□ -0.4
COMMD2-204ENST00000483146 CSPP1Q1MSJ5 1256 aa12.57□□□□□ -0.4
COMMD2-204ENST00000483146 CYP4X1Q8N118 509 aa12.57□□□□□ -0.4
COMMD2-204ENST00000483146 PTCRAQ6ISU1 281 aaPredicted RBP12.56□□□□□ -0.4
COMMD2-204ENST00000483146 MYT1Q01538 1121 aa12.55□□□□□ -0.4
COMMD2-204ENST00000483146 TOR4AQ9NXH8 423 aa12.55□□□□□ -0.4
COMMD2-204ENST00000483146 WNT7AO00755 349 aa12.54□□□□□ -0.4
COMMD2-204ENST00000483146 CCNYL3P0C7X3 344 aa12.54□□□□□ -0.4
COMMD2-204ENST00000483146 MYSM1Q5VVJ2 828 aa12.54□□□□□ -0.4
COMMD2-204ENST00000483146 HRCP23327 699 aa12.53□□□□□ -0.4
COMMD2-204ENST00000483146 CABLES1Q8TDN4 633 aa12.53□□□□□ -0.4
COMMD2-204ENST00000483146 ZBTB3Q9H5J0 574 aa12.53□□□□□ -0.4
COMMD2-204ENST00000483146 LIMD1Q9UGP4 676 aa12.53□□□□□ -0.4
COMMD2-204ENST00000483146 TTC24A2A3L6 582 aaPredicted RBP12.52□□□□□ -0.41
COMMD2-204ENST00000483146 PTPRNQ16849 979 aa12.52□□□□□ -0.41
COMMD2-204ENST00000483146 MRGPRX2Q96LB1 330 aa12.52□□□□□ -0.41
COMMD2-204ENST00000483146 SKOR1P84550 965 aa12.51□□□□□ -0.41
COMMD2-204ENST00000483146 CFAP99D6REC4 459 aa12.5□□□□□ -0.41
COMMD2-204ENST00000483146 RC3H1Q5TC82 1133 aaKnown RBP12.5□□□□□ -0.41
COMMD2-204ENST00000483146 DESI1Q6ICB0 168 aa12.5□□□□□ -0.41
COMMD2-204ENST00000483146 GPBP1L1Q9HC44 474 aaPredicted RBP12.5□□□□□ -0.41
COMMD2-204ENST00000483146 PRPF38BQ5VTL8 546 aaKnown RBP12.49□□□□□ -0.41
COMMD2-204ENST00000483146 EVA1BQ9NVM1 165 aa12.49□□□□□ -0.41
COMMD2-204ENST00000483146 NUTM2BA6NNL0 878 aaPredicted RBP12.48□□□□□ -0.41
COMMD2-204ENST00000483146 NUTM2EB1AL46 878 aaPredicted RBP12.48□□□□□ -0.41
COMMD2-204ENST00000483146 WNT7BP56706 349 aa12.48□□□□□ -0.41
COMMD2-204ENST00000483146 NUTM2DQ5VT03 806 aaPredicted RBP12.48□□□□□ -0.41
COMMD2-204ENST00000483146 NUTM2AQ8IVF1 878 aaPredicted RBP12.48□□□□□ -0.41
COMMD2-204ENST00000483146 ST8SIA5O15466 376 aa12.47□□□□□ -0.41
COMMD2-204ENST00000483146 KCNH2Q12809 1159 aa12.47□□□□□ -0.41
COMMD2-204ENST00000483146 QPCTQ16769 361 aa12.47□□□□□ -0.41
COMMD2-204ENST00000483146 ZNF787Q6DD87 383 aa12.47□□□□□ -0.41
COMMD2-204ENST00000483146 SNIP1Q8TAD8 396 aaKnown RBP12.47□□□□□ -0.41
COMMD2-204ENST00000483146 UNC93B1Q9H1C4 597 aa12.47□□□□□ -0.41
COMMD2-204ENST00000483146 POLR3EQ9NVU0 708 aa12.47□□□□□ -0.41
COMMD2-204ENST00000483146 LYPD8Q6UX82 237 aa12.46□□□□□ -0.41
COMMD2-204ENST00000483146 TSC1Q92574 1164 aa12.46□□□□□ -0.41
COMMD2-204ENST00000483146 KDM4CQ9H3R0 1056 aa12.46□□□□□ -0.41
COMMD2-204ENST00000483146 CTHP32929 405 aa12.45□□□□□ -0.42
COMMD2-204ENST00000483146 CLK2P49760 499 aaKnown RBP12.45□□□□□ -0.42
COMMD2-204ENST00000483146 LINC01559Q495D7 138 aa12.45□□□□□ -0.42
COMMD2-204ENST00000483146 RSPH6AQ9H0K4 717 aa12.45□□□□□ -0.42
COMMD2-204ENST00000483146 AAASQ9NRG9 546 aa12.45□□□□□ -0.42
COMMD2-204ENST00000483146 J3QL48 77 aa12.44□□□□□ -0.42
COMMD2-204ENST00000483146 LILRB3O75022 631 aa12.43□□□□□ -0.42
COMMD2-204ENST00000483146 SMPD1P17405 629 aa12.43□□□□□ -0.42
COMMD2-204ENST00000483146 SH3BP2P78314 561 aa12.43□□□□□ -0.42
COMMD2-204ENST00000483146 BAP1Q92560 729 aa12.43□□□□□ -0.42
COMMD2-204ENST00000483146 TUSC1Q2TAM9 212 aa12.42□□□□□ -0.42
COMMD2-204ENST00000483146 EHBP1Q8NDI1 1231 aa12.42□□□□□ -0.42
COMMD2-204ENST00000483146 FAM117AQ9C073 453 aa12.42□□□□□ -0.42
COMMD2-204ENST00000483146 AVPP01185 164 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms